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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin assembly
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Accession:GO:0031497 term browser browse the term
Definition:The assembly of DNA, histone proteins, other associated proteins, and sometimes RNA, into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus.
Synonyms:exact_synonym: establishment of chromatin architecture
 broad_synonym: chromatin maintenance



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chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdan1 codanin 1 involved_in ISO (PMID:22407294) RGD PMID:22407294 NCBI chr 3:107,675,147...107,689,811
Ensembl chr 3:107,673,645...107,689,773
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) RGD PMID:18650382 MGI:3807115 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor involved_in ISO (PMID:16322561) RGD PMID:16322561 NCBI chr 5:166,820,075...166,831,951
Ensembl chr 5:166,820,161...166,831,949
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11691835) RGD PMID:11691835 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:11691835) RGD PMID:11691835 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:16322561) RGD PMID:16322561 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
CENP-A containing chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpp centromere protein P involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,013,869...15,189,312
Ensembl chr17:15,014,058...15,189,304
JBrowse link
G Hjurp Holliday junction recognition protein involved_in ISO
IBA
(PMID:19410544), (PMID:19410545)
PMID:21873635
RGD PMID:19410544 PMID:19410545 PMID:21873635 RGD:13792537 NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:5441069 (MGI:5438906|PMID:22516971)
PMID:21873635
RGD PMID:22516971 PMID:21873635 MGI:5438906, RGD:13792537 NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Oip5 Opa interacting protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(MGI:3687778|PMID:10615135)
GO_REF:0000107
RGD
Ensembl
PMID:10615135 GO_REF:0000107 MGI:3687778 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO MGI:1261819 (MGI:3611125|PMID:16322236), (MGI:3768461|PMID:17938196) RGD PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO MGI:1261827 (MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:3768461 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
PMID:21873635
(MGI:3573964|PMID:15647320)
RGD PMID:15647320 PMID:21873635 MGI:3573964, RGD:13792537 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:3056522|MGI:3623309 (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO UniProtKB:Q13547 (PMID:23770133) RGD PMID:23770133 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
DNA replication-dependent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in IBA
ISO
PMID:21873635
(PMID:14718166)
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) RGD PMID:14718166
G H4f16 H4 histone 16 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Hat1 histone acetyltransferase 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
JBrowse link
G Hist1h3b histone cluster 1, H3b involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
JBrowse link
G Hist2h4 histone cluster 2, H4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ipo4 importin 4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:29,117,365...29,127,382
Ensembl chr15:29,117,365...29,127,285
JBrowse link
G LOC100912290 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC102548682 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,368,743...41,426,735 JBrowse link
G LOC102551184 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,526,192...41,575,488 JBrowse link
G LOC684819 similar to H3 histone, family 2 isoform 2 involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC684841 similar to CG31613-PA involved_in ISO (PMID:14718166) RGD PMID:14718166
G Nasp nuclear autoantigenic sperm protein acts_upstream_of_or_within
involved_in
ISS
ISO
IBA
GO_REF:0000024
(MGI:3694318|PMID:16728391)
PMID:21873635
(PMID:14718166)
UniProt
RGD
PMID:14718166 PMID:16728391 PMID:21873635 GO_REF:0000024 MGI:3694318, RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 involved_in ISO (PMID:14718166) RGD PMID:14718166
DNA replication-independent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
GO_REF:0000024
(PMID:22391447)
UniProt
RGD
PMID:22391447 GO_REF:0000024 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Cabin1 calcineurin binding protein 1 involved_in IBA
ISO
IEA
PMID:21873635
(PMID:14718166)
GO_REF:0000002
RGD
InterPro
PMID:14718166 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
JBrowse link
G H3f3a H3.3 histone A involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) RGD PMID:14718166
G H4f16 H4 histone 16 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Hat1 histone acetyltransferase 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hira histone cell cycle regulator involved_in IBA
ISO
PMID:21873635
(PMID:14718166)
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
JBrowse link
G Hist2h4 histone cluster 2, H4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ipo4 importin 4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:29,117,365...29,127,382
Ensembl chr15:29,117,365...29,127,285
JBrowse link
G LOC100912290 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC102548682 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,368,743...41,426,735 JBrowse link
G LOC102551184 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,526,192...41,575,488 JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ubn1 ubinuclein 1 involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr10:10,496,576...10,532,010
Ensembl chr10:10,496,576...10,532,010
JBrowse link
G Ubn2 ubinuclein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:67,165,278...67,251,562
Ensembl chr 4:67,166,346...67,230,491
JBrowse link
genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1855930|MGI:1855937 (MGI:2652932|PMID:12601169)
GO_REF:0000107
RGD
Ensembl
PMID:12601169 GO_REF:0000107 MGI:2652932 NCBI chr 3:143,473,584...143,561,170
Ensembl chr 3:143,555,696...143,561,171
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035 (MGI:2652932|PMID:12601169) RGD PMID:12601169 MGI:2652932 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO (PMID:17827499) RGD PMID:17827499 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within ISO MGI:2447127 (MGI:3663953|PMID:16920095) RGD PMID:16920095 MGI:3663953 NCBI chr20:10,614,933...10,629,516
Ensembl chr20:10,614,934...10,629,516
JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within ISO MGI:4459474 (MGI:4454202|PMID:20427744) RGD PMID:20427744 MGI:4454202 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653045|MGI:2653048 (MGI:1345919|PMID:10508517) RGD PMID:10508517 MGI:1345919 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Zdbf2 zinc finger, DBF-type containing 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:6161219 (MGI:6151717|PMID:27841881)
PMID:21873635
RGD PMID:27841881 PMID:21873635 MGI:6151717, RGD:13792537 NCBI chr 9:64,672,974...64,748,446
Ensembl chr 9:64,709,880...64,744,265
JBrowse link
G Zfp57 zinc finger protein 57 acts_upstream_of_or_within ISO MGI:3826984 (MGI:6506156|PMID:33500348) RGD PMID:33500348 MGI:6506156 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,135,927...26,136,235 JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO
IBA
(PMID:19666599)
PMID:21873635
RGD PMID:19666599 PMID:21873635 RGD:13792537 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) RGD PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:8,917,786...8,959,474
Ensembl chr 7:8,917,786...8,956,475
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO
IBA
(MGI:3820717|PMID:19026781)
PMID:21873635
RGD PMID:19026781 PMID:21873635 MGI:3820717, RGD:13792537 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO MGI:2178586 (MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:3510059 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16901784)
UniProt
RGD
PMID:16901784 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G Lmna lamin A/C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Lmnb1 lamin B1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G Lmnb2 lamin B2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:109,236,160...109,236,825
Ensembl chr 7:109,236,321...109,236,758
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311 (MGI:3530434|PMID:15608638) RGD PMID:15608638 MGI:3530434 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D involved_in ISO (MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:5551345 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA
(PMID:17540172)
GO_REF:0000107
RGD
Ensembl
PMID:17540172 GO_REF:0000107 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G RGD1560349 similar to histone-fold protein CHRAC17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:26,135,927...26,136,417 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:15469825) RGD PMID:15469825 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3653583|PMID:16678107) RGD PMID:16678107 MGI:3653583 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) RGD PMID:26109053 NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
G Tnp1 transition protein 1 involved_in ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:4431162|PMID:20080676) RGD PMID:20080676 MGI:4431162 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:155,764,073...155,791,777
Ensembl chr 3:155,764,980...155,821,242
JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (MGI:5532809|PMID:23754746) RGD PMID:23754746 MGI:5532809 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
negative regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:21496894) RGD PMID:21496894 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285126|PMID:21496894)
UniProt
RGD
PMID:21496894 GO_REF:0000024 MGI:5285126 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO (PMID:21496894) RGD PMID:21496894 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 involved_in ISO (PMID:20129925) RGD PMID:20129925 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO (PMID:20208542) RGD PMID:20208542 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07040686.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:100,270,675...100,270,878 JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B involved_in ISO (PMID:20538007) RGD PMID:20538007 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO (PMID:11897662) RGD PMID:11897662 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone acts_upstream_of_or_within ISO (MGI:2675150|PMID:12842904) RGD PMID:12842904 MGI:2675150 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISO
ISS
(PMID:20651253)
GO_REF:0000024
RGD
UniProt
PMID:20651253 GO_REF:0000024 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:14759371) RGD PMID:14759371 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Brd2 bromodomain containing 2 involved_in ISO
ISS
(PMID:18406326)
GO_REF:0000024
RGD
UniProt
PMID:18406326 GO_REF:0000024 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in ISO (PMID:14759371) RGD PMID:14759371 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
JBrowse link
G Daxx death-domain associated protein involved_in ISO
IBA
(PMID:20504901), (PMID:20651253)
(MGI:5567907|PMID:20651253)
PMID:21873635
RGD PMID:20504901 PMID:20651253 PMID:21873635 MGI:5567907, RGD:13792537 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dnajc9 DnaJ heat shock protein family (Hsp40) member C9 involved_in ISO (PMID:33857403) RGD PMID:33857403 NCBI chr15:3,923,842...3,928,118
Ensembl chr15:3,923,268...3,928,118
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 involved_in ISO
ISS
IEA
(PMID:25990725), (PMID:27552915)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25990725 PMID:27552915 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
JBrowse link
G H1f0 H1.0 linker histone involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H1f1 H1.1 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
JBrowse link
G H1f10 H1.10 linker histone involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
JBrowse link
G H1f2 H1.2 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
JBrowse link
G H1f4 H1.4 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H1f6 H1.6 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
JBrowse link
G H1f8 H1.8 linker histone involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H2ab3 H2A.B variant histone 3 involved_in ISO (PMID:22795134) RGD PMID:22795134 NCBI chr  X:82,362,633...82,362,983
Ensembl chr  X:82,362,633...82,362,983
JBrowse link
G H2bc1 H2B clustered histone 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(MGI:3702345|PMID:17261847)
(MGI:5502464|PMID:23884607)
(PMID:24699735)
PMID:21873635
UniProt
RGD
PMID:17261847 PMID:23884607 PMID:24699735 PMID:21873635 GO_REF:0000024 MGI:3702345 MGI:5502464, RGD:13792537 NCBI chr17:41,172,041...41,172,510 JBrowse link
G H2bc12 H2B clustered histone 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,485,746...42,486,126 JBrowse link
G H2bu1 H2B.U histone 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:43,732,737...43,733,484
Ensembl chr10:43,732,864...43,736,277
JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
JBrowse link
G H3c13 H3 clustered histone 13 involved_in ISO (PMID:21636898), (PMID:25615412) RGD PMID:21636898 PMID:25615412 NCBI chr17:41,529,860...41,532,577 JBrowse link
G H3f3a H3.3 histone A involved_in ISO (PMID:21636898), (PMID:25615412) RGD PMID:21636898 PMID:25615412 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B involved_in ISO (PMID:21636898), (PMID:25615412) RGD PMID:21636898 PMID:25615412 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G H3f4 H3.4 histone involved_in ISO (PMID:20498094), (PMID:25615412) RGD PMID:20498094 PMID:25615412 NCBI chr10:43,740,797...43,741,207 JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G H4f16 H4 histone 16 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G H4f3 H1.3 linker histone, cluster member involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
JBrowse link
G Hist1h2ao histone cluster 1, H2ao involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,704,740...42,705,130
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist1h2bg histone cluster 1, H2bg involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,571,278...41,571,658
Ensembl chr17:41,571,210...41,571,896
JBrowse link
G Hist1h2bo histone cluster 1 H2B family member o involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,716,433...42,718,046
Ensembl chr17:42,673,067...42,718,095
JBrowse link
G Hist1h3b histone cluster 1, H3b involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in IBA
ISO
PMID:21873635
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 RGD:13792537 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in IBA
ISO
PMID:21873635
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 RGD:13792537 NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
JBrowse link
G Hist2h3c2 histone cluster 2 H3 family member C2 involved_in ISO (PMID:21636898), (PMID:25615412) RGD PMID:21636898 PMID:25615412 NCBI chr 2:183,837,311...183,837,721
Ensembl chr 2:183,837,303...183,837,752
JBrowse link
G Hist2h4 histone cluster 2, H4 involved_in IBA
ISO
PMID:21873635
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 RGD:13792537 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G Hist3h2ba histone cluster 3, H2ba involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:43,725,836...43,726,465
Ensembl chr10:43,724,930...43,727,107
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:2465778) RGD PMID:2465778 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:2465778) RGD PMID:2465778 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
JBrowse link
G Kat6a lysine acetyltransferase 6A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
JBrowse link
G Kat6b lysine acetyltransferase 6B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316
JBrowse link
G LOC100912290 histone H4-like involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G LOC102548682 histone H4-like involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr17:41,368,743...41,426,735 JBrowse link
G LOC102551184 histone H4-like involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr17:41,526,192...41,575,488 JBrowse link
G LOC317165 similar to Set alpha isoform involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:39,589,341...39,596,429
Ensembl chr18:39,589,341...39,596,429
JBrowse link
G LOC499544 LRRGT00154 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,977,315...61,004,442
Ensembl chr 2:60,977,315...61,004,442
JBrowse link
G LOC499843 LRRGT00091 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:87,462,365...87,492,138
Ensembl chr 3:87,462,365...87,492,138
JBrowse link
G LOC500948 LRRGT00073 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:14,286,270...14,309,443
Ensembl chr 8:14,286,270...14,309,443
JBrowse link
G LOC684444 similar to HIStone family member (his-41) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:30,387,094...30,387,613
Ensembl chr 2:30,386,982...30,387,633
JBrowse link
G LOC684819 similar to H3 histone, family 2 isoform 2 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G LOC684841 similar to CG31613-PA involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G LOC690126 hypothetical protein LOC690126 involved_in ISO (PMID:21636898), (PMID:25615412) RGD PMID:21636898 PMID:25615412 NCBI chr 2:183,797,721...183,800,653 JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 acts_upstream_of_or_within ISO (MGI:2156014|PMID:10531422) RGD PMID:10531422 MGI:2156014 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Naa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit involved_in ISS
ISO
GO_REF:0000024
(PMID:21981917)
UniProt
RGD
PMID:21981917 GO_REF:0000024 NCBI chr10:11,622,554...11,653,078
Ensembl chr10:11,587,916...11,642,755
JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666
JBrowse link
G Nap1l3 nucleosome assembly protein 1-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:88,347,595...88,350,393
Ensembl chr  X:88,347,598...88,350,393
JBrowse link
G Nap1l4 nucleosome assembly protein 1-like 4 involved_in ISO
IBA
IEA
ISS
(PMID:9325046)
PMID:21873635
GO_REF:0000107
(MGI:5897488|PMID:28366643)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9325046 PMID:28366643 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5897488, RGD:13792537 NCBI chr 1:198,709,697...198,746,093
Ensembl chr 1:198,709,701...198,746,020
JBrowse link
G Nap1l5 nucleosome assembly protein 1-like 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:88,022,670...88,024,988
Ensembl chr 4:88,022,569...88,024,654
JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISO (PMID:25615412) RGD PMID:25615412 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:11602260) RGD PMID:11602260 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5545819|PMID:24463520)
UniProt
RGD
PMID:24463520 GO_REF:0000024 MGI:5545819 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Pkn3 protein kinase N3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:13,350,082...13,363,572
Ensembl chr 3:13,335,041...13,363,567
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:14759371) RGD PMID:14759371 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G RGD1560617 hypothetical gene supported by NM_053561; AF062594 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:118,084,674...118,085,850
Ensembl chr 7:118,084,696...118,085,850
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) RGD PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G RGD1563307 similar to Set beta isoform involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:86,449,036...86,453,703
Ensembl chr  X:119,908,942...119,909,886
Ensembl chr 1:119,908,942...119,909,886
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11691835), (PMID:12972596) RGD PMID:11691835 PMID:12972596 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:24526689) RGD PMID:24526689 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
G SET SET nuclear proto-oncogene involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:13,334,564...13,345,598
Ensembl chr 3:13,335,041...13,363,567
JBrowse link
G Setsip SET like protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
JBrowse link
G Shprh SNF2 histone linker PHD RING helicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:5,528,827...5,602,537
Ensembl chr 1:5,528,888...5,602,527
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:11691835), (PMID:12972596), (PMID:14759371) RGD PMID:11691835 PMID:12972596 PMID:14759371 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smyd3 SET and MYND domain containing 3 acts_upstream_of_or_within ISO (MGI:5500979|PMID:23752591) RGD PMID:23752591 MGI:5500979 NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
(PMID:20484372)
GO_REF:0000024
RGD
UniProt
PMID:20484372 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:23378026) RGD PMID:23378026 NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
G Tspy1 testis specific protein, Y-linked 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Tspy26 testis specific protein, Y-linked 26 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:141,690,653...141,692,729
Ensembl chr 3:141,689,899...141,692,670
JBrowse link
G Tspyl2 TSPY-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:21,439,478...21,445,208
Ensembl chr  X:21,439,478...21,445,089
JBrowse link
G Tspyl4 TSPY-like 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:38,098,756...38,100,752
Ensembl chr20:38,098,677...38,103,053
JBrowse link
G Tspyl5 TSPY-like 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
JBrowse link
pericentric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpv centromere protein V involved_in ISO
IBA
(PMID:18772885)
PMID:21873635
RGD PMID:18772885 PMID:21873635 RGD:13792537 NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589287 (MGI:3528782|PMID:15713842) RGD PMID:15713842 MGI:3528782 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within ISO MGI:1101768 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:1097686 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
PMID:21873635
(MGI:3041983|PMID:14612388)
RGD PMID:14612388 PMID:21873635 MGI:3041983, RGD:13792537 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27043296) RGD PMID:27043296 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein involved_in ISO
IBA
(PMID:27732843)
PMID:21873635
RGD PMID:27732843 PMID:21873635 RGD:13792537 NCBI chr 4:169,385,872...169,471,652
Ensembl chr 4:169,385,872...169,471,650
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24623306)
UniProt
Ensembl
RGD
PMID:24623306 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G LOC120093070 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,526,380...33,549,382
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G LOC120093163 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,453,948...33,475,669
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:28581500), (PMID:29211708)
(MGI:6271895|PMID:29728365)
RGD PMID:28581500 PMID:29211708 PMID:29728365 MGI:6271895 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:28581500), (PMID:29211708)
UniProt
RGD
PMID:28581500 PMID:29211708 GO_REF:0000024 NCBI chr15:30,800,546...30,828,415
Ensembl chr15:30,686,613...30,828,810
JBrowse link
G Pphln1 periphilin 1 involved_in ISO (PMID:28581500) RGD PMID:28581500 NCBI chr 7:124,538,594...124,629,985
Ensembl chr 7:124,538,627...124,629,985
JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO
IBA
(MGI:6271895|PMID:29728365)
PMID:21873635
RGD PMID:29728365 PMID:21873635 MGI:6271895, RGD:13792537 NCBI chr 4:182,325,913...182,362,054
Ensembl chr 4:182,335,454...182,362,054
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in IBA
ISO
PMID:21873635
(MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365)
(PMID:24623306), (PMID:27732843)
RGD PMID:20164836 PMID:24623306 PMID:27732843 PMID:29728365 PMID:21873635 MGI:5440670 MGI:6271895, RGD:13792537 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,553,657...33,606,586
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Tasor transcription activation suppressor involved_in ISO
IBA
(PMID:28581500), (PMID:29211708)
PMID:21873635
RGD PMID:28581500 PMID:29211708 PMID:21873635 RGD:13792537 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISS
ISO
GO_REF:0000024
(MGI:5440670|PMID:20164836)
(PMID:24623306)
UniProt
RGD
PMID:20164836 PMID:24623306 GO_REF:0000024 MGI:5440670 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
positive regulation of heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:20935635) RGD PMID:20935635 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO
ISS
(PMID:20407419)
GO_REF:0000024
RGD
UniProt
PMID:20407419 GO_REF:0000024 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
JBrowse link
rDNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in
acts_upstream_of_or_within
ISO (MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165), (MGI:3852588|PMID:19578370)
(MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299)
RGD PMID:12198165 PMID:16085498 PMID:16678107 PMID:19578370 PMID:20168299 MGI:3587127 MGI:3653583 MGI:3852313 MGI:3852588 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bend3 BEN domain containing 3 involved_in ISO
IBA
(PMID:26100909)
PMID:21873635
RGD PMID:26100909 PMID:21873635 RGD:13792537 NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:18485871)
PMID:21873635
UniProt
RGD
PMID:18485871 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165) RGD PMID:12198165 PMID:16085498 MGI:3587127 MGI:3852313 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Ubtf upstream binding transcription factor acts_upstream_of_or_within ISO (MGI:3836497|PMID:19103806) RGD PMID:19103806 MGI:3836497 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
JBrowse link
regulation of chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmntd2 lamin tail domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:15674325) RGD PMID:15674325 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) RGD PMID:26109053 NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:33980486) RGD PMID:33980486 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in ISO (PMID:33980486) RGD PMID:33980486 NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Samd1 sterile alpha motif domain containing 1 involved_in ISO (PMID:33980486) RGD PMID:33980486 NCBI chr19:24,151,136...24,154,475
Ensembl chr19:24,151,128...24,154,488
JBrowse link
regulation of genetic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (MGI:5528755|PMID:24036311) RGD PMID:24036311 MGI:5528755 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Dppa3 developmental pluripotency-associated 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5432962|PMID:22722204), (MGI:5447615|PMID:17143267)
GO_REF:0000024
RGD
UniProt
PMID:17143267 PMID:22722204 PMID:21873635 GO_REF:0000024 MGI:5432962 MGI:5447615, RGD:13792537 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Dppa3l1 developmental pluripotency associated 3-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:56,421,825...56,422,277
Ensembl chr 8:56,421,825...56,422,277
JBrowse link
G LOC120096627 developmental pluripotency-associated protein 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:69,456,777...69,460,079
Ensembl chr14:69,457,383...69,457,859
JBrowse link
G LOC120096971 developmental pluripotency-associated protein 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,224,329...27,232,700
Ensembl chr15:27,225,434...27,225,910
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO (MGI:5009774|PMID:21047779) RGD PMID:21047779 MGI:5009774 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 acts_upstream_of_or_within ISO MGI:4129024 (MGI:5559953|PMID:24291790) RGD PMID:24291790 MGI:5559953 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (MGI:5319411|PMID:22495301) RGD PMID:22495301 MGI:5319411 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Zfp42 zinc finger protein 42 acts_upstream_of_or_within ISO MGI:4125334 (MGI:4940138|PMID:21233130) RGD PMID:21233130 MGI:4940138 NCBI chr16:48,836,463...48,845,443
Ensembl chr16:48,836,648...48,845,401
JBrowse link
G Zfp445 zinc finger protein 445 involved_in ISO (PMID:30602440)
UniProtKB:Q8C6P8 (MGI:6284037|PMID:30602440)
RGD PMID:30602440 MGI:6284037 NCBI chr 8:122,453,175...122,473,355
Ensembl chr 8:122,454,328...122,473,286
JBrowse link
G Zfp57 zinc finger protein 57 involved_in ISO UniProtKB:Q8R2V3 (MGI:6284037|PMID:30602440) RGD PMID:30602440 MGI:6284037 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
regulation of heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone NOT|involved_in ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
subtelomeric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO UniProtKB:P38827 (MGI:892875|PMID:9214638) RGD PMID:9214638 MGI:892875 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within ISO MGI:1101768 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:1097686 (MGI:5694896|PMID:26159997) RGD PMID:26159997 MGI:5694896 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G Hat1 histone acetyltransferase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (MGI:5584328|PMID:24735877) RGD PMID:24735877 MGI:5584328 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21847107) RGD PMID:21847107 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    cellular process 17431
      cellular component organization or biogenesis 6532
        cellular component organization 6307
          chromatin organization 537
            chromatin assembly 193
              DNA replication-dependent chromatin assembly 23
              DNA replication-independent chromatin assembly + 28
              co-transcriptional chromatin reassembly 0
              heterochromatin assembly + 95
              nucleosome assembly + 97
              regulation of chromatin assembly + 38
Path 2
Term Annotations click to browse term
  biological_process 18734
    cellular process 17431
      cellular component organization or biogenesis 6532
        cellular component organization 6307
          organelle organization 3900
            chromosome organization 969
              chromatin organization 537
                chromatin assembly 193
                  DNA replication-dependent chromatin assembly 23
                  DNA replication-independent chromatin assembly + 28
                  co-transcriptional chromatin reassembly 0
                  heterochromatin assembly + 95
                  nucleosome assembly + 97
                  regulation of chromatin assembly + 38
paths to the root