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ONTOLOGY REPORT - ANNOTATIONS

Term:chromatin assembly
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Accession:GO:0031497 term browser browse the term
Definition:The assembly of DNA, histone proteins, other associated proteins, and sometimes RNA, into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus.
Synonyms:exact_synonym: establishment of chromatin architecture
 broad_synonym: chromatin maintenance


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chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdan1 congenital dyserythropoietic anemia, type I (human) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:120,546,635...120,561,998
Ensembl chr 2:120,546,635...120,680,609 		JBrowse link
G Chaf1a chromatin assembly factor 1, subunit A (p150) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:56,347,416...56,375,026
Ensembl chr17:56,347,439...56,379,289 		JBrowse link
G Chaf1b chromatin assembly factor 1, subunit B (p60) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:93,680,788...93,703,003
Ensembl chr16:93,680,789...93,703,003 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IDA (MGI:3807115|PMID:18650382) UniProt PMID:18650382 MGI:3807115 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G M1ap meiosis 1 associated protein involved_in NAS (MGI:1330413|PMID:9927484) UniProt PMID:9927484 MGI:1330413 NCBI chr 6:82,923,889...83,007,290
Ensembl chr 6:82,923,883...83,007,290 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:156,319,112...156,332,073
Ensembl chr 4:156,320,376...156,332,073 		JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163 		JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:97,229,103...97,341,989
Ensembl chr 7:97,229,096...97,341,985 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
G Trp53 transformation related protein 53 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
CENP-A containing chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpp centromere protein P involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:49,617,501...49,806,457
Ensembl chr13:49,617,499...49,806,261 		JBrowse link
G Hjurp Holliday junction recognition protein involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:88,186,578...88,205,366
Ensembl chr 1:88,190,193...88,205,355 		JBrowse link
G Itgb3bp integrin beta 3 binding protein (beta3-endonexin) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:99,655,643...99,717,403
Ensembl chr 4:99,653,639...99,787,010 		JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within
involved_in		 IMP
IBA		 (MGI:5438906|PMID:22516971)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:21873635 PMID:22516971 MGI:5438906 MGI:6201960 NCBI chr16:90,516,200...90,524,259
Ensembl chr16:90,516,200...90,524,292 		JBrowse link
G Nasp nuclear autoantigenic sperm protein (histone-binding) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:116,458,249...116,488,894
Ensembl chr 4:116,458,249...116,485,138 		JBrowse link
G Oip5 Opa interacting protein 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:119,440,013...119,448,986
Ensembl chr 2:119,439,993...119,448,950 		JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase (cytosine-5) 1 involved_in IDA (MGI:3687778|PMID:10615135) UniProt PMID:10615135 MGI:3687778 NCBI chr 9:20,818,501...20,871,184
Ensembl chr 9:20,818,505...20,871,184 		JBrowse link
G Dnmt3a DNA methyltransferase 3A acts_upstream_of_or_within IDA
IGI		 (MGI:3611125|PMID:16322236)
(MGI:3768461|PMID:17938196)		 MGI PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr12:3,851,559...3,964,443
Ensembl chr12:3,856,007...3,964,443 		JBrowse link
G Dnmt3b DNA methyltransferase 3B acts_upstream_of_or_within IGI (MGI:3768461|PMID:17938196) MGI PMID:17938196 MGI:3768461 NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,409,897...129,436,439
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
IMP		 (MGI:6201960|PMID:21873635)
(MGI:3573964|PMID:15647320)		 GO_Central
UniProt		 PMID:15647320 PMID:21873635 MGI:3573964 MGI:6201960 NCBI chr19:38,913,282...38,958,914
Ensembl chr19:38,919,359...38,959,495 		JBrowse link
G Kmt2b lysine (K)-specific methyltransferase 2B acts_upstream_of_or_within IMP (MGI:4849597|PMID:20808952) MGI PMID:20808952 MGI:4849597 NCBI chr 7:30,268,280...30,288,371
Ensembl chr 7:30,268,283...30,288,151 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:70,701,298...70,761,769
Ensembl chr18:70,701,260...70,759,202 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within IDA (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr10:80,228,373...80,235,365
Ensembl chr10:80,228,373...80,235,384 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IDA (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
DNA replication-dependent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:53,473,057...53,485,321
Ensembl chr10:53,472,853...53,485,321 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:84,682,323...84,696,824
Ensembl chr 8:84,682,136...84,696,826 		JBrowse link
G Chaf1a chromatin assembly factor 1, subunit A (p150) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:56,347,416...56,375,026
Ensembl chr17:56,347,439...56,379,289 		JBrowse link
G Chaf1b chromatin assembly factor 1, subunit B (p60) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:93,680,788...93,703,003
Ensembl chr16:93,680,789...93,703,003 		JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:23,945,868...23,946,369
Ensembl chr13:23,945,836...23,946,369 		JBrowse link
G H3c10 H3 clustered histone 10 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,901,798...21,902,285
Ensembl chr13:21,901,829...21,902,239 		JBrowse link
G H3c11 H3 clustered histone 11 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,967,085...21,967,567
Ensembl chr13:21,967,130...21,967,540 		JBrowse link
G H3c2 H3 clustered histone 2 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,936,328...23,936,823
Ensembl chr13:23,936,250...23,936,869 		JBrowse link
G H3c8 H3 clustered histone 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:23,719,588...23,720,079
Ensembl chr13:23,719,592...23,720,121 		JBrowse link
G H4c11 H4 clustered histone 11 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,919,204...21,919,626
Ensembl chr13:21,919,234...21,920,007 		JBrowse link
G H4c12 H4 clustered histone 12 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,934,315...21,934,723
Ensembl chr13:21,934,364...21,934,675 		JBrowse link
G H4c17 H4 clustered histone 17 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:21,995,916...21,996,320
Ensembl chr13:21,995,916...21,996,317 		JBrowse link
G H4c18 H4 clustered histone 18 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:22,015,962...22,016,367
Ensembl chr13:22,015,937...22,016,366 		JBrowse link
G H4c2 H4 clustered histone 2 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,940,920...23,941,369
Ensembl chr13:23,940,996...23,941,392 		JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,882,067...23,882,441
Ensembl chr13:23,881,618...23,882,437 		JBrowse link
G H4c4 H4 clustered histone 4 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,765,551...23,765,952
Ensembl chr13:23,765,581...23,766,718 		JBrowse link
G H4c8 H4 clustered histone 8 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,715,214...23,715,648
Ensembl chr13:23,715,220...23,715,689 		JBrowse link
G H4f16 H4 histone 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:136,780,991...136,781,429
Ensembl chr 6:136,778,551...136,781,413 		JBrowse link
G Hat1 histone aminotransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966 		JBrowse link
G Ipo4 importin 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:55,862,857...55,873,321
Ensembl chr14:55,862,857...55,873,414 		JBrowse link
G Nasp nuclear autoantigenic sperm protein (histone-binding) involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (MGI:6201960|PMID:21873635)
(MGI:3694318|PMID:16728391)		 MGI
GO_Central
UniProt		 PMID:16728391 PMID:21873635 GO_REF:0000096 MGI:3694318 MGI:4834177 MGI:6201960 NCBI chr 4:116,458,249...116,488,894
Ensembl chr 4:116,458,249...116,485,138 		JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163 		JBrowse link
DNA replication-independent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:53,473,057...53,485,321
Ensembl chr10:53,472,853...53,485,321 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:84,682,323...84,696,824
Ensembl chr 8:84,682,136...84,696,826 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Cabin1 calcineurin binding protein 1 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:75,481,944...75,600,194
Ensembl chr10:75,481,946...75,600,175 		JBrowse link
G H3f3a H3.3 histone A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,630,125...180,641,170
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G H4c11 H4 clustered histone 11 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,919,204...21,919,626
Ensembl chr13:21,919,234...21,920,007 		JBrowse link
G H4c12 H4 clustered histone 12 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:21,934,315...21,934,723
Ensembl chr13:21,934,364...21,934,675 		JBrowse link
G H4c17 H4 clustered histone 17 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:21,995,916...21,996,320
Ensembl chr13:21,995,916...21,996,317 		JBrowse link
G H4c18 H4 clustered histone 18 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:22,015,962...22,016,367
Ensembl chr13:22,015,937...22,016,366 		JBrowse link
G H4c2 H4 clustered histone 2 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,940,920...23,941,369
Ensembl chr13:23,940,996...23,941,392 		JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,882,067...23,882,441
Ensembl chr13:23,881,618...23,882,437 		JBrowse link
G H4c4 H4 clustered histone 4 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,765,551...23,765,952
Ensembl chr13:23,765,581...23,766,718 		JBrowse link
G H4c8 H4 clustered histone 8 involved_in ISO (PMID:14718166) UniProt PMID:14718166 NCBI chr13:23,715,214...23,715,648
Ensembl chr13:23,715,220...23,715,689 		JBrowse link
G H4f16 H4 histone 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:136,780,991...136,781,429
Ensembl chr 6:136,778,551...136,781,413 		JBrowse link
G Hat1 histone aminotransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966 		JBrowse link
G Hira histone cell cycle regulator involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr16:18,695,500...18,789,059
Ensembl chr16:18,695,787...18,789,059 		JBrowse link
G Ipo4 importin 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:55,862,857...55,873,321
Ensembl chr14:55,862,857...55,873,414 		JBrowse link
G Nasp nuclear autoantigenic sperm protein (histone-binding) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:116,458,249...116,488,894
Ensembl chr 4:116,458,249...116,485,138 		JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163 		JBrowse link
G Ubn1 ubinuclein 1 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr16:4,867,921...4,904,153
Ensembl chr16:4,867,921...4,904,153 		JBrowse link
G Ubn2 ubinuclein 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:38,410,860...38,489,698
Ensembl chr 6:38,410,885...38,501,760 		JBrowse link
gene silencing by RNA-directed DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnq1ot1 KCNQ1 overlapping transcript 1 acts_upstream_of_or_within IMP
IDA		 (MGI:4830046|PMID:20573698)
(MGI:3054495|PMID:15340049)		 MGI PMID:15340049 PMID:20573698 MGI:3054495 MGI:4830046 NCBI chr 7:142,766,848...142,850,284
Ensembl chr 7:142,757,195...142,850,286 		JBrowse link
genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti acts_upstream_of_or_within IMP (MGI:2652932|PMID:12601169) MGI PMID:12601169 MGI:2652932 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
Ensembl chr 2:154,633,322...154,892,932 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within IMP (MGI:2652932|PMID:12601169) MGI PMID:12601169 MGI:2652932 NCBI chr17:26,350,208...26,414,785
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C (P57) acts_upstream_of_or_within IMP (MGI:3839493|PMID:19276117) MGI PMID:19276117 MGI:3839493 NCBI chr 7:143,012,076...143,014,802
Ensembl chr 7:143,012,076...143,014,787 		JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554 		JBrowse link
G Dnmt3l DNA (cytosine-5-)-methyltransferase 3-like acts_upstream_of_or_within IMP (MGI:3663953|PMID:16920095) MGI PMID:16920095 MGI:3663953 NCBI chr10:77,878,121...77,899,456
Ensembl chr10:77,877,781...77,899,456 		JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus acts_upstream_of_or_within IMP (MGI:4454202|PMID:20427744) MGI PMID:20427744 MGI:4454202 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Gnasas1 GNAS antisense RNA 1 acts_upstream_of_or_within IMP (MGI:4454202|PMID:20427744) MGI PMID:20427744 MGI:4454202 NCBI chr 2:174,123,030...174,137,229
Ensembl chr 2:174,123,030...174,137,229 		JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within IMP
IDA		 (MGI:4839866|PMID:20610486)
(MGI:5465388|PMID:23195472)		 MGI PMID:20610486 PMID:23195472 MGI:4839866 MGI:5465388 NCBI chr12:109,506,879...109,538,163
Ensembl chr12:109,506,884...109,538,160 		JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within IMP (MGI:1345919|PMID:10508517) MGI PMID:10508517 MGI:1345919 NCBI chr 7:61,998,025...61,999,676
Ensembl chr 7:61,996,317...62,000,010 		JBrowse link
G Zdbf2 zinc finger, DBF-type containing 2 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (MGI:6151717|PMID:27841881)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:21873635 PMID:27841881 MGI:6151717 MGI:6201960 NCBI chr 1:63,239,517...63,353,735
Ensembl chr 1:63,312,424...63,353,735 		JBrowse link
G Zfp57 zinc finger protein 57 acts_upstream_of_or_within IMP (MGI:6506156|PMID:33500348) MGI PMID:33500348 MGI:6506156 NCBI chr17:37,307,060...37,326,196
Ensembl chr17:37,312,055...37,321,527 		JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:118,730,817...118,755,009
Ensembl chr 2:118,730,858...118,755,009 		JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within IMP
IDA		 (MGI:4462332|PMID:20168299)
(MGI:3653583|PMID:16678107)		 MGI PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr10:127,927,453...127,965,172
Ensembl chr10:127,927,446...127,965,172 		JBrowse link
G Cbx3 chromobox 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:51,447,596...51,460,684
Ensembl chr 6:51,447,340...51,460,684 		JBrowse link
G Cbx8 chromobox 8 acts_upstream_of_or_within ISS (MGI:1353080|PMID:10721694) MGI PMID:10721694 MGI:1353080 NCBI chr11:118,929,262...118,931,739
Ensembl chr11:118,927,131...118,931,795 		JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:33,405,067...33,432,467
Ensembl chr 5:33,405,067...33,432,338 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in IDA
IBA		 (MGI:3820717|PMID:19026781)
(MGI:6201960|PMID:21873635)		 ARUK-UCL
GO_Central		 PMID:19026781 PMID:21873635 MGI:3820717 MGI:6201960 NCBI chr11:101,081,941...101,117,289
Ensembl chr11:101,081,941...101,117,289 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:47,507,208...47,572,309
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G H1f0 H1.0 linker histone involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:78,912,412...78,914,704
Ensembl chr15:78,912,650...78,914,704 		JBrowse link
G H1f9 H1.9 linker histone involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:94,858,419...94,859,282
Ensembl chr11:94,858,419...94,859,282 		JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within IMP (MGI:3510059|PMID:15448183) MGI PMID:15448183 MGI:3510059 NCBI chr19:38,913,282...38,958,914
Ensembl chr19:38,919,359...38,959,495 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) acts_upstream_of_or_within IMP (MGI:5528742|PMID:24075995) MGI PMID:24075995 MGI:5528742 NCBI chr15:102,852,497...102,856,381
Ensembl chr15:102,852,497...102,856,165 		JBrowse link
G Kmt2d lysine (K)-specific methyltransferase 2D involved_in IMP (MGI:4849597|PMID:20808952) UniProt PMID:20808952 MGI:4849597 NCBI chr15:98,729,550...98,771,958
Ensembl chr15:98,729,550...98,769,085 		JBrowse link
G L3mbtl1 L3MBTL1 histone methyl-lysine binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:162,784,260...162,819,726
Ensembl chr 2:162,785,392...162,816,442 		JBrowse link
G Lmna lamin A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263 		JBrowse link
G Lmnb1 lamin B1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:56,840,885...56,886,496
Ensembl chr18:56,840,885...56,886,496 		JBrowse link
G Lmnb2 lamin B2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:80,737,197...80,754,079
Ensembl chr10:80,737,037...80,754,079 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (MGI:3530434|PMID:15608638) MGI PMID:15608638 MGI:3530434 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,178,969 		JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:62,442,035...62,443,251
Ensembl chr 4:62,440,886...62,443,305 		JBrowse link
G Ppm1d protein phosphatase 1D magnesium-dependent, delta isoform involved_in IDA (MGI:5551345|PMID:24135283) UniProt PMID:24135283 MGI:5551345 NCBI chr11:85,202,080...85,237,897
Ensembl chr11:85,202,070...85,237,892 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in IDA (MGI:3653583|PMID:16678107) ComplexPortal PMID:16678107 MGI:3653583 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:46,640,144...46,658,162
Ensembl chr 7:46,640,144...46,658,159 		JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 involved_in TAS (MGI:3688024|PMID:11788710) UniProt PMID:11788710 MGI:3688024 NCBI chr  X:7,927,410...7,940,999
Ensembl chr  X:7,927,410...7,940,999 		JBrowse link
G Tnp1 transition protein 1 involved_in ISO (PMID:11315969) UniProt PMID:11315969 NCBI chr 1:73,054,233...73,055,058
Ensembl chr 1:73,054,233...73,055,068 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IDA (MGI:4431162|PMID:20080676) UniProt PMID:20080676 MGI:4431162 NCBI chr17:47,239,217...47,321,812
Ensembl chr17:47,239,221...47,321,482 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within IMP (MGI:5305502|PMID:22192413) MGI PMID:22192413 MGI:5305502 NCBI chr  Y:1,085,187...1,245,787
Ensembl chr  Y:1,096,861...1,245,759 		JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:77,856,799...78,314,359
Ensembl chr13:77,850,152...78,314,354 		JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:166,877,710...166,904,935
Ensembl chr 2:166,877,713...166,904,935 		JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smchd1 SMC hinge domain containing 1 involved_in IMP (MGI:5532809|PMID:23754746) UniProt PMID:23754746 MGI:5532809 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
negative regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 involved_in IMP (MGI:5285126|PMID:21496894) UniProt PMID:21496894 MGI:5285126 NCBI chr 6:122,554,751...122,579,995
Ensembl chr 6:122,554,751...122,579,403 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,640,349...62,723,242
Ensembl chr10:62,640,349...62,744,775 		JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:48,955,226...49,024,361
Ensembl chr13:48,955,226...49,024,595 		JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:150,303,621...150,416,855
Ensembl chr  X:150,303,668...150,416,855 		JBrowse link
nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32b acidic (leucine-rich) nuclear phosphoprotein 32 family, member B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:46,450,926...46,472,657
Ensembl chr 4:46,450,902...46,472,657 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr10:53,473,057...53,485,321
Ensembl chr10:53,472,853...53,485,321 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone acts_upstream_of_or_within IDA (MGI:2675150|PMID:12842904) MGI PMID:12842904 MGI:2675150 NCBI chr 8:84,682,323...84,696,824
Ensembl chr 8:84,682,136...84,696,826 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain 1A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:54,939,774...55,061,155
Ensembl chr12:54,939,774...55,061,133 		JBrowse link
G Brd2 bromodomain containing 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:34,330,993...34,341,581
Ensembl chr17:34,330,997...34,341,608 		JBrowse link
G Chaf1a chromatin assembly factor 1, subunit A (p150) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:56,347,416...56,375,026
Ensembl chr17:56,347,439...56,379,289 		JBrowse link
G Chaf1b chromatin assembly factor 1, subunit B (p60) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:93,680,788...93,703,003
Ensembl chr16:93,680,789...93,703,003 		JBrowse link
G Chrac1 chromatin accessibility complex 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:72,962,261...72,965,924
Ensembl chr15:72,962,241...72,969,403 		JBrowse link
G Daxx Fas death domain-associated protein involved_in IBA
IMP
ISO		 (MGI:6201960|PMID:21873635)
(MGI:5567907|PMID:20651253)		 GO_Central
UniProt
MGI		 PMID:20651253 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:5567907 MGI:6201960 NCBI chr17:34,128,379...34,134,564
Ensembl chr17:34,128,388...34,134,564 		JBrowse link
G Dnajc9 DnaJ heat shock protein family (Hsp40) member C9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:20,434,706...20,438,978
Ensembl chr14:20,434,706...20,438,978 		JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:45,474,647...45,480,418
Ensembl chr 7:45,474,647...45,480,368 		JBrowse link
G H1f0 H1.0 linker histone involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr15:78,912,412...78,914,704
Ensembl chr15:78,912,650...78,914,704 		JBrowse link
G H1f1 H1.1 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:23,947,651...23,948,395
Ensembl chr13:23,947,649...23,948,389 		JBrowse link
G H1f2 H1.2 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:23,922,790...23,923,514
Ensembl chr13:23,922,791...23,924,350 		JBrowse link
G H1f3 H1.3 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:23,739,206...23,739,981
Ensembl chr13:23,737,436...23,744,860 		JBrowse link
G H1f4 H1.4 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:23,805,760...23,806,541
Ensembl chr13:23,804,612...23,806,541 		JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:21,964,002...21,964,795
Ensembl chr13:21,964,053...21,964,795 		JBrowse link
G H1f6 H1.6 linker histone, cluster member involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:23,879,794...23,880,528
Ensembl chr13:23,879,797...23,880,708 		JBrowse link
G H1f8 H1.8 linker histone acts_upstream_of_or_within ISA (MGI:2159419|PMID:11171391) MGI PMID:11171391 MGI:2159419 NCBI chr 6:115,921,892...115,927,203
Ensembl chr 6:115,921,899...115,927,197 		JBrowse link
G H1f9 H1.9 linker histone involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:94,858,419...94,859,282
Ensembl chr11:94,858,419...94,859,282 		JBrowse link
G H2ab2 H2A.B variant histone 2 involved_in ISO (PMID:22795134) UniProt PMID:22795134 NCBI chr  X:115,590,875...115,591,222
Ensembl chr  X:115,590,875...115,591,222 		JBrowse link
G H2ab3 H2A.B variant histone 3 involved_in ISO (PMID:22795134) UniProt PMID:22795134 NCBI chr  X:119,222,279...119,222,923
Ensembl chr  X:119,222,445...119,222,792 		JBrowse link
G H2al2a H2A histone family member L2A acts_upstream_of_or_within IDA (MGI:3702345|PMID:17261847) MGI PMID:17261847 MGI:3702345 NCBI chr 2:18,001,228...18,001,769
Ensembl chr 2:18,001,228...18,001,769 		JBrowse link
G H2bc1 H2B clustered histone 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP
IDA		 (MGI:6201960|PMID:21873635)
(MGI:5502464|PMID:23884607)
(MGI:3702345|PMID:17261847)		 MGI
GO_Central
UniProt		 PMID:17261847 PMID:21873635 PMID:23884607 GO_REF:0000096 MGI:3702345 MGI:4834177 MGI:5502464 MGI:6201960 NCBI chr13:24,117,708...24,118,139
Ensembl chr13:24,117,756...24,118,139 		JBrowse link
G H2bc12 H2B clustered histone 12 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:22,219,991...22,220,490
Ensembl chr13:22,220,040...22,220,515 		JBrowse link
G H2bc14 H2B clustered histone 14 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,906,214...21,906,696
Ensembl chr13:21,906,214...21,906,737 		JBrowse link
G H2bc18 H2B clustered histone 18 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,177,016...96,177,508
Ensembl chr 3:96,177,068...96,177,448 		JBrowse link
G H2bc21 H2B clustered histone 21 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 3:96,128,388...96,131,054
Ensembl chr 3:96,128,435...96,131,054 		JBrowse link
G H2bc22 H2B clustered histone 22 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,971,652...21,985,731
Ensembl chr13:21,971,631...21,973,383 		JBrowse link
G H2bc3 H2B clustered histone 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,930,717...23,931,206
Ensembl chr13:23,930,717...23,931,224 		JBrowse link
G H2bc4 H2B clustered histone 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,868,182...23,876,805
Ensembl chr13:23,868,182...23,876,891 		JBrowse link
G H2bc7 H2B clustered histone 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,757,934...23,758,381
Ensembl chr13:23,757,910...23,758,370 		JBrowse link
G H2bc9 H2B clustered histone 9 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,727,093...23,727,614
Ensembl chr13:23,725,884...23,727,562 		JBrowse link
G H2bl1 H2B.L histone variant 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:99,120,598...99,121,073
Ensembl chr13:99,120,593...99,121,073 		JBrowse link
G H2bu2 H2B.U histone 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:58,839,737...58,840,198
Ensembl chr11:58,839,746...58,840,359 		JBrowse link
G H2bw2 H2B.W histone 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:135,828,074...135,829,122
Ensembl chr  X:135,828,074...135,829,125 		JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:23,945,868...23,946,369
Ensembl chr13:23,945,836...23,946,369 		JBrowse link
G H3c10 H3 clustered histone 10 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735)
(PMID:25615412)		 UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:21,901,798...21,902,285
Ensembl chr13:21,901,829...21,902,239 		JBrowse link
G H3c11 H3 clustered histone 11 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735)
(PMID:25615412)		 UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:21,967,085...21,967,567
Ensembl chr13:21,967,130...21,967,540 		JBrowse link
G H3c13 H3 clustered histone 13 involved_in ISO (PMID:21636898), (PMID:25615412) UniProt PMID:21636898 PMID:25615412 NCBI chr 3:96,175,970...96,176,471
Ensembl chr 3:96,175,970...96,176,457 		JBrowse link
G H3c15 H3 clustered histone 15 involved_in ISO (PMID:21636898), (PMID:25615412) UniProt PMID:21636898 PMID:25615412 NCBI chr 3:96,145,795...96,146,443
Ensembl chr 3:96,145,424...96,146,443 		JBrowse link
G H3c2 H3 clustered histone 2 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735)
(PMID:25615412)		 UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:23,936,328...23,936,823
Ensembl chr13:23,936,250...23,936,869 		JBrowse link
G H3c7 H3 clustered histone 7 involved_in ISO (PMID:21636898), (PMID:25615412) UniProt PMID:21636898 PMID:25615412 NCBI chr13:23,728,222...23,729,124
Ensembl chr13:23,728,222...23,729,482 		JBrowse link
G H3c8 H3 clustered histone 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:23,719,588...23,720,079
Ensembl chr13:23,719,592...23,720,121 		JBrowse link
G H3f3a H3.3 histone A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,630,125...180,641,170
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G H3f4 H3.4 histone involved_in ISO (PMID:25615412)
(PMID:20498094)		 UniProt PMID:20498094 PMID:25615412 NCBI chr11:58,852,537...58,853,099
Ensembl chr11:58,852,599...58,853,364 		JBrowse link
G H4c11 H4 clustered histone 11 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:21,919,204...21,919,626
Ensembl chr13:21,919,234...21,920,007 		JBrowse link
G H4c12 H4 clustered histone 12 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:21,934,315...21,934,723
Ensembl chr13:21,934,364...21,934,675 		JBrowse link
G H4c14 H4 clustered histone 14 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,170,250...96,170,633
Ensembl chr 3:96,168,998...96,170,627 		JBrowse link
G H4c17 H4 clustered histone 17 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:21,995,916...21,996,320
Ensembl chr13:21,995,916...21,996,317 		JBrowse link
G H4c18 H4 clustered histone 18 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:22,015,962...22,016,367
Ensembl chr13:22,015,937...22,016,366 		JBrowse link
G H4c2 H4 clustered histone 2 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:23,940,920...23,941,369
Ensembl chr13:23,940,996...23,941,392 		JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:23,882,067...23,882,441
Ensembl chr13:23,881,618...23,882,437 		JBrowse link
G H4c4 H4 clustered histone 4 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:23,765,551...23,765,952
Ensembl chr13:23,765,581...23,766,718 		JBrowse link
G H4c8 H4 clustered histone 8 involved_in ISO (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) UniProt PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 NCBI chr13:23,715,214...23,715,648
Ensembl chr13:23,715,220...23,715,689 		JBrowse link
G H4f16 H4 histone 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:136,780,991...136,781,429
Ensembl chr 6:136,778,551...136,781,413 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:2465778) AgBase PMID:2465778 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:2465778) AgBase PMID:2465778 NCBI chr 8:57,964,877...57,969,033
Ensembl chr 8:57,964,941...57,969,033 		JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:137,938,789...137,971,994
Ensembl chr 4:137,943,607...137,971,994 		JBrowse link
G Kat6a K(lysine) acetyltransferase 6A involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275 		JBrowse link
G Kat6b K(lysine) acetyltransferase 6B involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr14:21,549,284...21,722,546
Ensembl chr14:21,531,502...21,722,546 		JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:56,221,435...56,283,439
Ensembl chr13:56,221,432...56,284,174 		JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:61,574,419...61,620,383
Ensembl chr10:61,574,444...61,619,926 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 acts_upstream_of_or_within IDA (MGI:2156014|PMID:10531422) MGI PMID:10531422 MGI:2156014 NCBI chr 6:88,860,456...88,875,762
Ensembl chr 6:88,860,456...88,875,762 		JBrowse link
G Naa60 N(alpha)-acetyltransferase 60, NatF catalytic subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:3,690,365...3,722,645
Ensembl chr16:3,690,239...3,722,634 		JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:111,308,754...111,334,011
Ensembl chr10:111,309,084...111,334,011 		JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:102,227,782...102,230,259
Ensembl chr  X:102,227,782...102,230,246 		JBrowse link
G Nap1l3 nucleosome assembly protein 1-like 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:121,304,257...121,307,082
Ensembl chr  X:121,304,262...121,307,098 		JBrowse link
G Nap1l4 nucleosome assembly protein 1-like 4 involved_in IBA
ISO
IDA		 (MGI:6201960|PMID:21873635)
(MGI:5897488|PMID:28366643)		 GO_Central
MGI
UniProt		 PMID:21873635 PMID:28366643 GO_REF:0000096 MGI:4834177 MGI:5897488 MGI:6201960 NCBI chr 7:143,067,316...143,103,698
Ensembl chr 7:143,067,316...143,102,843 		JBrowse link
G Nap1l5 nucleosome assembly protein 1-like 5 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:58,882,218...58,884,111
Ensembl chr 6:58,882,218...58,884,061 		JBrowse link
G Nasp nuclear autoantigenic sperm protein (histone-binding) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:116,458,249...116,488,894
Ensembl chr 4:116,458,249...116,485,138 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:33,102,498...33,114,143
Ensembl chr11:33,102,287...33,113,206 		JBrowse link
G Padi4 peptidyl arginine deiminase, type IV involved_in IMP (MGI:5545819|PMID:24463520) UniProt PMID:24463520 MGI:5545819 NCBI chr 4:140,472,819...140,501,514
Ensembl chr 4:140,473,176...140,501,547 		JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:62,442,035...62,443,251
Ensembl chr 4:62,440,886...62,443,305 		JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:97,229,103...97,341,989
Ensembl chr 7:97,229,096...97,341,985 		JBrowse link
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:113,880,505...113,910,461
Ensembl chr 5:113,880,507...113,910,571 		JBrowse link
G Set SET nuclear oncogene involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:29,952,008...29,962,589
Ensembl chr 2:29,947,390...29,962,589 		JBrowse link
G Shprh SNF2 histone linker PHD RING helicase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:11,024,765...11,093,339
Ensembl chr10:11,025,171...11,093,339 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 acts_upstream_of_or_within TAS (MGI:1929360|PMID:11163203) MGI PMID:11163203 MGI:1929360 NCBI chr19:26,580,804...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within TAS (MGI:1929360|PMID:11163203) MGI PMID:11163203 MGI:1929360 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
G Smyd3 SET and MYND domain containing 3 acts_upstream_of_or_within IMP (MGI:5500979|PMID:23752591) MGI PMID:23752591 MGI:5500979 NCBI chr 1:178,779,525...179,345,618
Ensembl chr 1:178,779,525...179,345,606 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:46,640,144...46,658,162
Ensembl chr 7:46,640,144...46,658,159 		JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IC (MGI:6869994|PMID:21362547) ComplexPortal PMID:21362547 MGI:6869994 NCBI chr 2:84,867,464...84,877,458
Ensembl chr 2:84,867,578...84,877,453 		JBrowse link
G Supt16 SPT16, facilitates chromatin remodeling subunit involved_in IC (MGI:6869994|PMID:21362547) ComplexPortal PMID:21362547 MGI:6869994 NCBI chr14:52,397,876...52,434,696
Ensembl chr14:52,397,871...52,434,873 		JBrowse link
G Tspyl1 testis-specific protein, Y-encoded-like 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:34,158,186...34,160,881
Ensembl chr10:34,158,186...34,161,271 		JBrowse link
G Tspyl2 TSPY-like 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:151,119,847...151,125,480
Ensembl chr  X:151,119,848...151,125,421 		JBrowse link
G Tspyl4 TSPY-like 4 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:34,173,417...34,177,316
Ensembl chr10:34,173,438...34,177,316 		JBrowse link
G Tspyl5 testis-specific protein, Y-encoded-like 5 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr15:33,684,021...33,688,029
Ensembl chr15:33,684,021...33,688,030 		JBrowse link
pericentric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpv centromere protein V involved_in ISS
IBA
ISO		 (MGI:3834784|PMID:18772885)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central
MGI		 PMID:18772885 PMID:21873635 GO_REF:0000096 MGI:3834784 MGI:4834177 MGI:6201960 NCBI chr11:62,415,770...62,430,695
Ensembl chr11:62,415,772...62,430,087 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:3528782|PMID:15713842) MGI PMID:15713842 MGI:3528782 NCBI chr12:104,653,999...104,718,227
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within IGI (MGI:5694896|PMID:26159997) MGI PMID:26159997 MGI:5694896 NCBI chr 1:180,630,125...180,641,170
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within IGI (MGI:5694896|PMID:26159997) MGI PMID:26159997 MGI:5694896 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
IMP		 (MGI:6201960|PMID:21873635)
(MGI:3041983|PMID:14612388)		 GO_Central
UniProt		 PMID:14612388 PMID:21873635 MGI:3041983 MGI:6201960 NCBI chr19:38,913,282...38,958,914
Ensembl chr19:38,919,359...38,959,495 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 6:136,495,787...136,587,848
NCBI chr 6:136,531,089...136,532,543
Ensembl chr 6:136,483,165...136,587,860 		JBrowse link
G Atf7ip2 activating transcription factor 7 interacting protein 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:10,010,513...10,068,595
Ensembl chr16:10,010,576...10,069,342 		JBrowse link
G Dnmt1 DNA methyltransferase (cytosine-5) 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:20,818,501...20,871,184
Ensembl chr 9:20,818,505...20,871,184 		JBrowse link
G Morc2a microrchidia 2A involved_in ISO
IMP		 (MGI:6271895|PMID:29728365) MGI
UniProt		 PMID:29728365 GO_REF:0000096 MGI:4834177 MGI:6271895 NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477 		JBrowse link
G Morc2b microrchidia 2B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:33,354,562...33,369,473
Ensembl chr17:33,332,325...33,358,657 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:56,905,692...56,934,887
Ensembl chr14:56,905,705...56,934,887 		JBrowse link
G Pphln1 periphilin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:93,296,224...93,389,794
Ensembl chr15:93,296,231...93,389,391 		JBrowse link
G Resf1 retroelement silencing factor 1 involved_in IMP
IBA		 (MGI:6271895|PMID:29728365)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central		 PMID:21873635 PMID:29728365 MGI:6201960 MGI:6271895 NCBI chr 6:149,210,907...149,237,161
Ensembl chr 6:149,210,912...149,237,161 		JBrowse link
G Setdb1 SET domain, bifurcated 1 involved_in IBA
ISO
IMP		 (MGI:6201960|PMID:21873635)
(MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365)		 GO_Central
MGI
UniProt		 PMID:20164836 PMID:21873635 PMID:29728365 GO_REF:0000096 MGI:4834177 MGI:5440670 MGI:6201960 MGI:6271895 NCBI chr 3:95,230,836...95,264,513
Ensembl chr 3:95,230,836...95,264,513 		JBrowse link
G Setdb2 SET domain, bifurcated 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:59,639,458...59,678,329
Ensembl chr14:59,639,458...59,678,333 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:27,150,759...27,205,512
Ensembl chr14:27,150,791...27,205,512 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO
IMP		 (MGI:5440670|PMID:20164836) MGI
UniProt		 PMID:20164836 GO_REF:0000096 MGI:4834177 MGI:5440670 NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962 		JBrowse link
positive regulation of heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin-dependent kinase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:128,533,807...128,540,920
Ensembl chr10:128,533,808...128,540,900 		JBrowse link
G Sin3a transcriptional regulator, SIN3A (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:56,979,271...57,035,652
Ensembl chr 9:56,979,324...57,035,650 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:150,268,544...150,325,686
Ensembl chr 1:150,268,589...150,325,686 		JBrowse link
rDNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in
acts_upstream_of_or_within		 IDA
IMP		 (MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165), (MGI:3852588|PMID:19578370)
(MGI:3653583|PMID:16678107)
(MGI:4462332|PMID:20168299)		 UniProt
MGI		 PMID:12198165 PMID:16085498 PMID:16678107 PMID:19578370 PMID:20168299 MGI:3587127 MGI:3653583 MGI:3852313 MGI:3852588 MGI:4462332 NCBI chr10:127,927,453...127,965,172
Ensembl chr10:127,927,446...127,965,172 		JBrowse link
G Bend3 BEN domain containing 3 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:43,355,130...43,391,413
Ensembl chr10:43,354,827...43,391,392 		JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:105,380,937...105,386,592
Ensembl chr 7:105,380,937...105,386,592 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in IDA (MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165) UniProt PMID:12198165 PMID:16085498 MGI:3587127 MGI:3852313 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:7,927,410...7,940,999
Ensembl chr  X:7,927,410...7,940,999 		JBrowse link
G Ubtf upstream binding transcription factor, RNA polymerase I acts_upstream_of_or_within IMP (MGI:3836497|PMID:19103806) MGI PMID:19103806 MGI:3836497 NCBI chr11:102,195,386...102,214,738
Ensembl chr11:102,195,386...102,210,568 		JBrowse link
regulation of chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmntd2 lamin tail domain containing 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:140,789,903...140,795,617
Ensembl chr 7:140,789,905...140,793,993 		JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:76,117,195...76,127,640
Ensembl chr15:76,115,374...76,127,641 		JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:46,640,144...46,658,162
Ensembl chr 7:46,640,144...46,658,159 		JBrowse link
regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm1a lysine (K)-specific demethylase 1A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G L3mbtl3 L3MBTL3 histone methyl-lysine binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:26,150,361...26,252,426
Ensembl chr10:26,150,366...26,251,967 		JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr17:35,816,929...35,821,674
Ensembl chr17:35,816,915...35,821,669 		JBrowse link
G Samd1 sterile alpha motif domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:84,724,145...84,727,044
Ensembl chr 8:84,724,130...84,727,038 		JBrowse link
regulation of genetic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within IMP (MGI:5528755|PMID:24036311) MGI PMID:24036311 MGI:5528755 NCBI chr 7:110,628,158...110,655,584
Ensembl chr 7:110,628,158...110,655,584 		JBrowse link
G Dppa3 developmental pluripotency-associated 3 involved_in IBA
IMP		 (MGI:6201960|PMID:21873635)
(MGI:5432962|PMID:22722204), (MGI:5447615|PMID:17143267)		 GO_Central
UniProt		 PMID:17143267 PMID:21873635 PMID:22722204 MGI:5432962 MGI:5447615 MGI:6201960 NCBI chr 6:122,603,383...122,607,230
Ensembl chr 6:122,603,369...122,607,231 		JBrowse link
G H19 H19, imprinted maternally expressed transcript acts_upstream_of_or_within IMP (MGI:1096753|PMID:9294195) MGI PMID:9294195 MGI:1096753 NCBI chr 7:142,129,267...142,131,883
Ensembl chr 7:142,129,266...142,131,880 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in IDA (MGI:5009774|PMID:21047779) BHF-UCL PMID:21047779 MGI:5009774 NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 acts_upstream_of_or_within IMP (MGI:5559953|PMID:24291790) MGI PMID:24291790 MGI:5559953 NCBI chr10:62,640,349...62,723,242
Ensembl chr10:62,640,349...62,744,775 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within IMP (MGI:5319411|PMID:22495301) MGI PMID:22495301 MGI:5319411 NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962 		JBrowse link
G Zfp42 zinc finger protein 42 acts_upstream_of_or_within IMP (MGI:4940138|PMID:21233130) MGI PMID:21233130 MGI:4940138 NCBI chr 8:43,748,104...43,760,046
Ensembl chr 8:43,748,100...43,760,017 		JBrowse link
G Zfp445 zinc finger protein 445 involved_in IDA
ISO
IGI		 (MGI:6284037|PMID:30602440) UniProt
MGI		 PMID:30602440 GO_REF:0000096 MGI:4834177 MGI:6284037 NCBI chr 9:122,677,975...122,715,916
Ensembl chr 9:122,673,594...122,695,071 		JBrowse link
G Zfp57 zinc finger protein 57 involved_in IGI (MGI:6284037|PMID:30602440) UniProt PMID:30602440 MGI:6284037 NCBI chr17:37,307,060...37,326,196
Ensembl chr17:37,312,055...37,321,527 		JBrowse link
regulation of heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1a bromodomain adjacent to zinc finger domain 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:54,939,774...55,061,155
Ensembl chr12:54,939,774...55,061,133 		JBrowse link
regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone NOT|involved_in ISO (PMID:24071584) UniProt PMID:24071584 NCBI chr13:56,221,435...56,283,439
Ensembl chr13:56,221,432...56,284,174 		JBrowse link
subtelomeric heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in IGI (MGI:892875|PMID:9214638) ARUK-UCL PMID:9214638 MGI:892875 NCBI chr11:101,081,941...101,117,289
Ensembl chr11:101,081,941...101,117,289 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:47,507,208...47,572,309
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within IGI (MGI:5694896|PMID:26159997) MGI PMID:26159997 MGI:5694896 NCBI chr 1:180,630,125...180,641,170
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within IGI (MGI:5694896|PMID:26159997) MGI PMID:26159997 MGI:5694896 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G Hat1 histone aminotransferase 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP (MGI:5584328|PMID:24735877) BHF-UCL PMID:24735877 MGI:5584328 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28749
    cellular process 17698
      cellular component organization or biogenesis 6722
        cellular component organization 6529
          chromatin organization 612
            chromatin assembly 191
              DNA replication-dependent chromatin assembly 22
              DNA replication-independent chromatin assembly + 27
              co-transcriptional chromatin reassembly 0
              heterochromatin assembly + 93
              nucleosome assembly + 97
              regulation of chromatin assembly + 36
Path 2
Term Annotations click to browse term
  biological_process 28749
    cellular process 17698
      cellular component organization or biogenesis 6722
        cellular component organization 6529
          organelle organization 3964
            chromosome organization 1040
              chromatin organization 612
                chromatin assembly 191
                  DNA replication-dependent chromatin assembly 22
                  DNA replication-independent chromatin assembly + 27
                  co-transcriptional chromatin reassembly 0
                  heterochromatin assembly + 93
                  nucleosome assembly + 97
                  regulation of chromatin assembly + 36
paths to the root