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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin DNA binding
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Accession:GO:0031490 term browser browse the term
Definition:Binding to DNA that is assembled into chromatin.



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chromatin DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,135,927...26,136,235 JBrowse link
G Actn4 actinin alpha 4 enables ISO (PMID:25411248) RGD PMID:25411248 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO
ISS
(PMID:11809897)
GO_REF:0000024
RGD
UniProt
PMID:11809897 GO_REF:0000024 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables ISO (MGI:3578607|PMID:15788459) RGD PMID:15788459 MGI:3578607 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Bcl6 BCL6, transcription repressor enables ISO (MGI:3695553|PMID:17125145) RGD PMID:17125145 MGI:3695553 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Clock clock circadian regulator enables IEA
ISO
ISS
GO_REF:0000107
(MGI:5568183|PMID:24610784)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24610784 GO_REF:0000024 GO_REF:0000107 MGI:5568183 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Crebbp CREB binding protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:24049074) RGD PMID:24049074 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Ep300 E1A binding protein p300 enables IDA
ISO
(MGI:3796777|PMID:18458156) RGD PMID:18458156 PMID:20702579 MGI:3796777, RGD:5128544 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:19734898)
(MGI:3789777|PMID:18483221), (MGI:5576864|PMID:24137001)
RGD PMID:18483221 PMID:19734898 PMID:24137001 MGI:3789777 MGI:5576864 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Foxc2 forkhead box C2 enables ISO (PMID:16456100) RGD PMID:16456100 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Foxo1 forkhead box O1 enables ISO (MGI:6278316|PMID:29320745) RGD PMID:29320745 MGI:6278316 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Foxo3 forkhead box O3 enables ISO (MGI:5572869|PMID:17521387) RGD PMID:17521387 MGI:5572869 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gata1 GATA binding protein 1 enables ISO
ISS
(PMID:22235304)
GO_REF:0000024
RGD
UniProt
PMID:22235304 GO_REF:0000024 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Grhl1 grainyhead-like transcription factor 1 enables ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 6:41,207,325...41,257,516
Ensembl chr 6:41,207,348...41,254,301
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 enables ISO (PMID:21081122) RGD PMID:21081122 NCBI chr 5:147,774,160...147,806,338
Ensembl chr 5:147,774,160...147,806,160
JBrowse link
G H1f0 H1.0 linker histone enables ISO (PMID:15911621) RGD PMID:15911621 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H1f1 H1.1 linker histone, cluster member enables ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
JBrowse link
G H1f2 H1.2 linker histone, cluster member enables ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:41,391,106...41,392,611 JBrowse link
G H1f4 H1.4 linker histone, cluster member enables ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member enables ISO (PMID:15911621), (PMID:22956909) RGD PMID:15911621 PMID:22956909 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H2az1 H2A.Z variant histone 1 enables ISO (PMID:19834540), (PMID:23637611) RGD PMID:19834540 PMID:23637611 NCBI chr 2:226,355,769...226,357,878
Ensembl chr 2:226,355,708...226,358,485
JBrowse link
G H4f3 H1.3 linker histone, cluster member enables ISO (PMID:15911621) RGD PMID:15911621 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac3 histone deacetylase 3 enables ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO
IEA
(PMID:11003645)
GO_REF:0000107
RGD
Ensembl
PMID:11003645 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:21085490) RGD PMID:21085490 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Insm1 INSM transcriptional repressor 1 enables ISO (PMID:16569215), (PMID:18417529) RGD PMID:16569215 PMID:18417529 NCBI chr 3:133,639,790...133,642,963 JBrowse link
G Jmjd1c jumonji domain containing 1C enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
JBrowse link
G Kdm3a lysine demethylase 3A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Kdm3b lysine demethylase 3B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,380,859...26,436,701
Ensembl chr18:26,380,964...26,436,628
JBrowse link
G Kdm4d lysine demethylase 4D enables ISO (MGI:55267|PMID:6953429) RGD PMID:6953429 MGI:55267 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (MGI:3789777|PMID:18483221) RGD PMID:18483221 MGI:3789777 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm6a lysine demethylase 6A enables IBA
ISO
PMID:21873635
(MGI:5506833|PMID:23658530)
RGD PMID:23658530 PMID:21873635 MGI:5506833, RGD:13792537 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Kdm6b lysine demethylase 6B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
JBrowse link
G Lemd3 LEM domain containing 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:109,236,160...109,236,825
Ensembl chr 7:109,236,321...109,236,758
JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO
IEA
(PMID:19734898), (PMID:24071584)
GO_REF:0000104
RGD
UniProt
PMID:19734898 PMID:24071584 GO_REF:0000104 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone enables ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA RGD PMID:9038338 RGD:1601325 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Med1 mediator complex subunit 1 IDA RGD PMID:20702579 RGD:5128544 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Myod1 myogenic differentiation 1 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5508271|PMID:15706034), (MGI:5608518|PMID:25085416)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15706034 PMID:25085416 GO_REF:0000024 GO_REF:0000107 MGI:5508271 MGI:5608518 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin enables ISS
ISO
GO_REF:0000024
(MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234), (MGI:5608518|PMID:25085416)
UniProt
RGD
PMID:15706034 PMID:22847234 PMID:25085416 GO_REF:0000024 MGI:5508271 MGI:5526919 MGI:5608518 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Neurog3 neurogenin 3 enables ISO (MGI:3619850|PMID:16511571) RGD PMID:16511571 MGI:3619850 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
JBrowse link
G Nkap NFKB activating protein enables IEA
ISO
GO_REF:0000107
(MGI:4838711|PMID:20610818)
Ensembl
RGD
PMID:20610818 GO_REF:0000107 MGI:4838711 NCBI chr  X:116,373,031...116,392,677
Ensembl chr  X:116,372,839...116,394,945
JBrowse link
G Notch1 notch receptor 1 enables ISO (MGI:3718933|PMID:17658278) RGD PMID:17658278 MGI:3718933 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Per1 period circadian regulator 1 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5568183|PMID:24610784)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24610784 GO_REF:0000024 GO_REF:0000107 MGI:5568183 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Pitx2 paired-like homeodomain 2 enables ISO (MGI:4881620|PMID:21035439) RGD PMID:21035439 MGI:4881620 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables ISS
ISO
GO_REF:0000024
(MGI:3771455|PMID:17952069)
UniProt
RGD
PMID:17952069 GO_REF:0000024 MGI:3771455 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prdm14 PR/SET domain 14 enables ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO (PMID:19917671) RGD PMID:19917671 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables ISO (PMID:25411248) RGD PMID:25411248 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 enables ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Rxra retinoid X receptor alpha enables ISO (MGI:3771455|PMID:17952069) RGD PMID:17952069 MGI:3771455 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Sbno1 strawberry notch homolog 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:32,175,176...32,234,200
Ensembl chr12:32,185,485...32,230,158
JBrowse link
G Sbno2 strawberry notch homolog 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527
JBrowse link
G Smad3 SMAD family member 3 enables ISO (MGI:3696631|PMID:16224064) RGD PMID:16224064 MGI:3696631 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Srf serum response factor enables ISO (MGI:3796777|PMID:18458156) RGD PMID:18458156 MGI:3796777 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables ISS
ISO
GO_REF:0000024
(PMID:17344214)
UniProt
RGD
PMID:17344214 GO_REF:0000024 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables IBA
ISO
PMID:21873635
(MGI:3789777|PMID:18483221)
RGD PMID:18483221 PMID:21873635 MGI:3789777, RGD:13792537 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Thra thyroid hormone receptor alpha enables IEA
ISO
GO_REF:0000107
(MGI:3771455|PMID:17952069)
Ensembl
RGD
PMID:17952069 GO_REF:0000107 MGI:3771455 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thrb thyroid hormone receptor beta enables IEA
ISO
GO_REF:0000107
(MGI:3771455|PMID:17952069)
Ensembl
RGD
PMID:17952069 GO_REF:0000107 MGI:3771455 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
G Top1 DNA topoisomerase I IDA RGD PMID:1332866 RGD:1580856 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tox thymocyte selection-associated high mobility group box enables IBA
ISO
PMID:21873635
(MGI:5632052|PMID:25527292)
RGD PMID:25527292 PMID:21873635 MGI:5632052, RGD:13792537 NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
JBrowse link
G Tox2 TOX high mobility group box family member 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:151,853,294...151,980,086
Ensembl chr 3:151,853,294...151,980,749
JBrowse link
G Tox3 TOX high mobility group box family member 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:16,648,338...16,757,151
Ensembl chr19:16,648,342...16,757,148
JBrowse link
G Tox4 TOX high mobility group box family member 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,989,246...25,002,833
Ensembl chr15:24,988,853...25,002,833
JBrowse link
G Vax1 ventral anterior homeobox 1 enables ISO (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
JBrowse link
G Vax2 ventral anterior homeobox 2 enables IEA
ISO
GO_REF:0000107
(MGI:3578573|PMID:15905411)
Ensembl
RGD
PMID:15905411 GO_REF:0000107 MGI:3578573 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
JBrowse link
G Wbp2 WW domain binding protein 2 enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:23233354)
Ensembl
RGD
PMID:23233354 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
JBrowse link
G Wbp2nl WBP2 N-terminal like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,814,793...113,831,974
Ensembl chr 7:113,814,992...113,831,333
JBrowse link
G Xbp1 X-box binding protein 1 enables ISO
ISS
(PMID:25280941)
GO_REF:0000024
RGD
UniProt
PMID:25280941 GO_REF:0000024 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zic2 Zic family member 2 enables ISO (MGI:4833763|PMID:20676059) RGD PMID:20676059 MGI:4833763 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
JBrowse link
chromatin insulator sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC099444.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ctcf CCCTC-binding factor enables ISO
IEA
IBA
(PMID:17827499)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:17827499 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G LOC103694540 zinc finger Y-chromosomal protein 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Repin1 replication initiator 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:77,548,722...77,554,242
Ensembl chr 4:77,548,849...77,554,257
JBrowse link
G Zfp711 zinc finger protein 711 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:77,646,300...77,679,398
Ensembl chr  X:77,646,558...77,678,045
JBrowse link
G Zfx zinc finger protein X-linked enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:58,804,690...58,853,155
Ensembl chr  X:58,804,691...58,853,265
JBrowse link
nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053402.1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G AABR07053884.1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G AABR07057877.1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G H1f0 H1.0 linker histone enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H1f1 H1.1 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
JBrowse link
G H1f10 H1.10 linker histone enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
JBrowse link
G H1f2 H1.2 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,391,106...41,392,611 JBrowse link
G H1f4 H1.4 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H1f6 H1.6 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
JBrowse link
G H1f8 H1.8 linker histone enables IBA
ISO
ISS
PMID:21873635
(MGI:5559660|PMID:22868987)
GO_REF:0000024
RGD
CAFA
PMID:22868987 PMID:21873635 GO_REF:0000024 MGI:5559660, RGD:13792537 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H2az1 H2A.Z variant histone 1 enables ISO (PMID:19633671) RGD PMID:19633671 NCBI chr 2:226,355,769...226,357,878
Ensembl chr 2:226,355,708...226,358,485
JBrowse link
G H3f3a H3.3 histone A enables ISO (PMID:19633671) RGD PMID:19633671 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B enables ISO (PMID:19633671) RGD PMID:19633671 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G H4f3 H1.3 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
(PMID:17078040)
GO_REF:0000024
RGD
UniProt
PMID:17078040 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254
JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:146,192,126...146,195,580
Ensembl chr 5:146,192,126...146,195,521
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:84,022,493...84,059,329
Ensembl chr 8:84,022,495...84,062,976
JBrowse link
G Hmgn4 high mobility group nucleosomal binding domain 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:99,990,743...99,991,093
Ensembl chr 3:99,990,743...99,991,003
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:74,085,871...74,094,488 JBrowse link
G Hmgn5b high mobility group nucleosome binding domain 5B enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC100360316 hypothetical protein LOC100360316 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:30,633,338...30,634,512
Ensembl chr16:30,622,845...30,634,512
JBrowse link
G LOC100363319 high mobility group nucleosomal binding domain 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:83,520,046...83,520,312
Ensembl chr 7:83,520,046...83,520,312
JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:20008927)
(MGI:5619474|PMID:18936163)
RGD PMID:18936163 PMID:20008927 MGI:5619474 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:17435751) RGD PMID:17435751 NCBI chr 5:144,526,025...144,544,445
Ensembl chr 5:144,526,025...144,544,577
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19885
    binding 16956
      chromatin binding 667
        chromatin DNA binding 104
          chromatin insulator sequence binding 6
          nucleosomal DNA binding 27
Path 2
Term Annotations click to browse term
  molecular_function 19885
    binding 16956
      organic cyclic compound binding 5693
        nucleic acid binding 3553
          DNA binding 2205
            chromatin DNA binding 104
              chromatin insulator sequence binding 6
              nucleosomal DNA binding 27
paths to the root