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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of heterochromatin assembly
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Accession:GO:0031452 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin formation.
Synonyms:exact_synonym: down regulation of heterochromatin formation;   downregulation of heterochromatin formation;   negative regulation of heterochromatin formation
 narrow_synonym: inhibition of heterochromatin formation



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negative regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:21496894) RGD PMID:21496894 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285126|PMID:21496894)
UniProt
RGD
PMID:21496894 GO_REF:0000024 MGI:5285126 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO (PMID:21496894) RGD PMID:21496894 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 involved_in ISO (PMID:20129925) RGD PMID:20129925 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO (PMID:20208542) RGD PMID:20208542 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      positive regulation of metabolic process 3949
        positive regulation of macromolecule metabolic process 3624
          positive regulation of gene expression 1262
            negative regulation of heterochromatin assembly 5
              negative regulation of DNA methylation-dependent heterochromatin assembly 3
              negative regulation of heterochromatin assembly by small RNA 0
              negative regulation of ribosomal DNA heterochromatin assembly 2
              negative regulation of silent mating-type cassette heterochromatin assembly 0
Path 2
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      cellular component organization or biogenesis 6620
        cellular component organization 6378
          organelle organization 3888
            chromosome organization 964
              chromatin organization 530
                regulation of gene expression, epigenetic 194
                  negative regulation of gene expression, epigenetic 118
                    heterochromatin assembly 112
                      regulation of heterochromatin assembly 24
                        negative regulation of heterochromatin assembly 5
                          negative regulation of DNA methylation-dependent heterochromatin assembly 3
                          negative regulation of heterochromatin assembly by small RNA 0
                          negative regulation of ribosomal DNA heterochromatin assembly 2
                          negative regulation of silent mating-type cassette heterochromatin assembly 0
paths to the root