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ONTOLOGY REPORT - ANNOTATIONS

Term:box C/D methylation guide snoRNP complex
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Accession:GO:0031428 term browser browse the term
Definition:A ribonucleoprotein complex containing a box C/D type RNA that is capable of ribose-2'-O-methylation of target RNAs. Box C/D type RNAs are widespread in eukaryotes and in Archaea, suggesting that an RNA-based guide mechanism for directing specific RNA 2'-O-ribose methylations was present in the common ancestor of Archaea and Eukarya.
Synonyms:exact_synonym: box C/D snoRNP ribose 2'-O methylase complex
 narrow_synonym: box C/D sRNP complex;   box C/D small nucleolar ribonucleoprotein complex;   box C/D snoRNP complex;   box C/D snoRNP ribose-2'-O-methyltransferase complex


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box C/D methylation guide snoRNP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000064122 part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:144,511,368...144,511,634 JBrowse link
G Fbl fibrillarin part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932 		JBrowse link
G Fbll1 fibrillarin-like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 IDA RGD PMID:10679015 RGD:633515 NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088 		JBrowse link
G Nop56 NOP56 ribonucleoprotein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:117,476,963...117,481,847
Ensembl chr 3:117,477,053...117,481,841 		JBrowse link
G Nop58 NOP58 ribonucleoprotein part_of ISO
IEA
IBA		 (PMID:33367824)
GO_REF:0000002
GO_REF:0000118
GO_REF:0000033		 RGD
InterPro
TreeGrafter
GO_Central		 PMID:33367824 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:61,120,939...61,144,810
Ensembl chr 9:61,120,929...61,144,810 		JBrowse link
G Rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein part_of ISO (PMID:9418896) RGD PMID:9418896 NCBI chr 8:107,116,411...107,126,123
Ensembl chr 8:107,117,471...107,126,123 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 part_of ISO
IBA		 (PMID:11081632)
(MGI:5882914|PMID:11842104)
GO_REF:0000033		 RGD
GO_Central		 PMID:11081632 PMID:11842104 GO_REF:0000033 MGI:5882914 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872 		JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      ribonucleoprotein complex 1355
        sno(s)RNA-containing ribonucleoprotein complex 31
          box C/D RNP complex 9
            box C/D methylation guide snoRNP complex 9
paths to the root