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ONTOLOGY REPORT - ANNOTATIONS

Term:alkali metal ion binding
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Accession:GO:0031420 term browser browse the term
Definition:Binding to an alkali metal ion; alkali metals are those elements in group Ia of the periodic table, with the exception of hydrogen.


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lithium ion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPA1 inositol monophosphatase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr29:28,772,044...28,799,170
Ensembl chr29:28,771,853...28,799,077 		JBrowse link
G PDXK pyridoxal kinase enables ISO (PMID:9252787) UniProt PMID:9252787 NCBI chr31:37,686,002...37,710,059
Ensembl chr31:37,685,492...37,707,767 		JBrowse link
potassium ion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812 		JBrowse link
G ADPRH ADP-ribosylarginine hydrolase enables IEA Ensembl GO_REF:0000107 NCBI chr33:23,218,633...23,226,844
Ensembl chr33:23,218,101...23,224,667 		JBrowse link
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 enables ISO PMID:18075585
(PMID:18581035)
(PMID:18075585)		 RGD
BHF-UCL
AgBase		 PMID:16269407 PMID:18075585 PMID:18581035 RGD:10047180 RGD:1579784 NCBI chr17:53,828,482...53,847,043
Ensembl chr17:53,813,976...53,847,167 		JBrowse link
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chr38:22,023,176...22,080,656
Ensembl chr38:22,023,221...22,080,604 		JBrowse link
G ATP4A ATPase H+/K+ transporting subunit alpha enables ISS UniProt GO_REF:0000024 NCBI chr 1:117,103,937...117,116,779
Ensembl chr 1:117,103,620...117,116,778 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 enables ISO (PMID:26592762) DisProt PMID:26592762 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697 		JBrowse link
G DRG1 developmentally regulated GTP binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr26:24,327,714...24,350,782
Ensembl chr26:24,327,739...24,350,659 		JBrowse link
G HDAC4 histone deacetylase 4 enables ISO (PMID:18614528) BHF-UCL PMID:18614528 NCBI chr25:49,318,621...49,545,314
Ensembl chr25:49,317,349...49,453,478 		JBrowse link
G KCNA4 potassium voltage-gated channel subfamily A member 4 enables IEA InterPro GO_REF:0000002 NCBI chr21:50,114,251...50,120,070
Ensembl chr21:50,115,506...50,117,506 		JBrowse link
G KCNJ1 potassium inwardly rectifying channel subfamily J member 1 ISO RGD PMID:16906771 RGD:1625250 NCBI chr 5:5,783,242...5,813,961
Ensembl chr 5:5,809,118...5,812,794 		JBrowse link
G PARP6 poly(ADP-ribose) polymerase family member 6 enables IEA InterPro GO_REF:0000002 NCBI chr30:35,745,384...35,773,597 JBrowse link
G PDXK pyridoxal kinase enables ISO (PMID:17766369), (PMID:9252787) UniProt PMID:9252787 PMID:17766369 NCBI chr31:37,686,002...37,710,059
Ensembl chr31:37,685,492...37,707,767 		JBrowse link
G PKLR pyruvate kinase L/R enables IEA InterPro GO_REF:0000002 NCBI chr 7:42,263,899...42,272,770
Ensembl chr 7:42,263,761...42,272,755 		JBrowse link
G PKM pyruvate kinase M1/2 enables IEA InterPro GO_REF:0000002 NCBI chr30:35,712,853...35,737,643 JBrowse link
sodium ion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked enables ISO (MGI:5882880|PMID:20304108), (MGI:5882882|PMID:19086270) CAFA PMID:19086270 PMID:20304108 MGI:5882880 MGI:5882882 NCBI chr  X:7,822,513...7,828,692
Ensembl chr  X:7,822,859...7,830,351 		JBrowse link
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 enables ISO (PMID:18581035)
PMID:18075585		 RGD
AgBase
BHF-UCL		 PMID:16269407 PMID:18075585 PMID:18581035 RGD:10047180 RGD:1579784 NCBI chr17:53,828,482...53,847,043
Ensembl chr17:53,813,976...53,847,167 		JBrowse link
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chr38:22,023,176...22,080,656
Ensembl chr38:22,023,221...22,080,604 		JBrowse link
G CAPN3 calpain 3 enables IEA Ensembl GO_REF:0000107 NCBI chr30:9,329,190...9,384,622
Ensembl chr30:9,329,015...9,383,772 		JBrowse link
G PDXK pyridoxal kinase enables ISO (PMID:17766369), (PMID:9252787) UniProt PMID:9252787 PMID:17766369 NCBI chr31:37,686,002...37,710,059
Ensembl chr31:37,685,492...37,707,767 		JBrowse link
G SCN1A sodium voltage-gated channel alpha subunit 1 ISO RGD PMID:15664695 RGD:1599536 NCBI chr36:11,105,936...11,245,978
Ensembl chr36:11,108,050...11,183,496 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO RGD PMID:15664695 RGD:1599536 NCBI chr36:10,472,496...10,605,055
Ensembl chr36:10,472,361...10,602,685 		JBrowse link
G SCN3A sodium voltage-gated channel alpha subunit 3 ISO RGD PMID:15664695 RGD:1599536 NCBI chr36:10,300,091...10,405,361
Ensembl chr36:10,302,191...10,377,923 		JBrowse link
G SCN8A sodium voltage-gated channel alpha subunit 8 enables ISO
IEA		 RGD
Ensembl		 PMID:15664695 GO_REF:0000107 RGD:1599536 NCBI chr27:3,174,257...3,348,349
Ensembl chr27:3,176,013...3,296,482 		JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 ISO RGD PMID:15664695 RGD:1599536 NCBI chr36:11,287,358...11,382,897
Ensembl chr36:11,290,625...11,383,255 		JBrowse link
G SLC34A2 solute carrier family 34 member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:84,686,505...84,717,579
Ensembl chr 3:84,686,425...84,742,038 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736 		JBrowse link
G TDG thymine DNA glycosylase enables IEA Ensembl GO_REF:0000107 NCBI chr15:42,493,593...42,516,868
Ensembl chr15:42,493,737...42,515,448 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18797
    binding 16661
      small molecule binding 5665
        ion binding 5419
          cation binding 3604
            metal ion binding 3480
              alkali metal ion binding 25
                lithium ion binding 2
                potassium ion binding 14
                sodium ion binding 13
paths to the root