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ONTOLOGY REPORT - ANNOTATIONS


Term:translation initiation factor binding
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Accession:GO:0031369 term browser browse the term
Definition:Binding to a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation.



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translation initiation factor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07065139.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:107,202,400...107,204,535 JBrowse link
G AABR07065139.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:107,124,892...107,127,024 JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IPI RGD PMID:23737983 RGD:10755504 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 enables ISO (MGI:3695954|PMID:16931514) RGD PMID:16931514 MGI:3695954 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked enables ISO (PMID:22323517), (PMID:22872150) RGD PMID:22323517 PMID:22872150 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IDA RGD PMID:9446619 RGD:1581068 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon enables IDA
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:9446619 PMID:21873635 PMID:11500362 RGD:1581068, RGD:13792537, RGD:1581085 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493
JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F enables IBA
ISO
PMID:21873635
(MGI:5543727|PMID:24003236)
RGD PMID:24003236 PMID:21873635 MGI:5543727, RGD:13792537 NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204
JBrowse link
G Eif3m eukaryotic translation initiation factor 3, subunit M enables ISO (MGI:5543727|PMID:24003236) RGD PMID:24003236 MGI:5543727 NCBI chr 3:91,424,754...91,442,358
Ensembl chr 3:91,416,325...91,442,392
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IPI RGD PMID:11865047 RGD:1625627 NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
JBrowse link
G Fmr1 FMRP translational regulator 1 enables IEA
ISO
GO_REF:0000107
UniProtKB:P55010 (PMID:24658146)
Ensembl
RGD
PMID:24658146 GO_REF:0000107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Gch1 GTP cyclohydrolase 1 IPI RGD PMID:22479495 RGD:10755507 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
JBrowse link
G Gle1 GLE1 RNA export mediator enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379
JBrowse link
G Gle1-ps1 GLE1 RNA export mediator homolog (yeast), pseudogene 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:107,124,892...107,127,024 JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator enables ISO (PMID:24532714) RGD PMID:24532714 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Lin28a lin-28 homolog A enables ISO PR:Q8JZQ9 (MGI:3709663|PMID:17473174) RGD PMID:17473174 MGI:3709663 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G Polr2d RNA polymerase II subunit D enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,418,097...23,425,228
Ensembl chr18:23,418,097...23,425,228
JBrowse link
G Polr2g RNA polymerase II subunit G enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686
JBrowse link
G RGD1565693 similar to GLE1-like, RNA export mediator isoform 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:107,202,205...107,204,543
Ensembl chr 6:107,202,400...107,204,535
JBrowse link
G Rps19 ribosomal protein S19 enables IPI PMID:3384085 UniProt PMID:3384085 RGD:8554720 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps24 ribosomal protein S24 enables IPI PMID:3384085 UniProt PMID:3384085 RGD:8554720 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279
JBrowse link
G Rps3a ribosomal protein S3a enables IPI PMID:3384085 UniProt PMID:3384085 RGD:8554720 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055
JBrowse link
G Syt11 synaptotagmin 11 enables ISO UniProtKB:Q1JU68|UniProtKB:Q4G061 (MGI:5574516|PMID:24882364) RGD PMID:24882364 MGI:5574516 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Tbl2 transducin (beta)-like 2 enables ISO UniProtKB:P05198 (PMID:25393282) RGD PMID:25393282 NCBI chr12:21,517,600...21,532,114
Ensembl chr12:21,520,682...21,531,896
JBrowse link
G Trim32 tripartite motif-containing 32 enables ISS
ISO
GO_REF:0000024
PR:P10630 (MGI:3610252|PMID:16243356)
BHF-UCL
RGD
PMID:16243356 GO_REF:0000024 MGI:3610252 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Zpr1 ZPR1 zinc finger enables ISO
IBA
UniProtKB:P68104 (PMID:9852145)
UniProtKB:P68104 (MGI:5553250|PMID:9852145)
PMID:21873635
RGD PMID:9852145 PMID:21873635 MGI:5553250, RGD:13792537 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link
eukaryotic initiation factor 4E binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel1 angel homolog 1 enables IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23814182)
Ensembl
AgBase
RGD
PMID:23814182 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:106,349,125...106,386,202
Ensembl chr 6:106,349,126...106,386,209
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked enables ISO (PMID:17667941) RGD PMID:17667941 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 enables IPI
ISO
IBA
PR:P63037 (MGI:3604839|PMID:16142217)
PMID:21873635
(PMID:23814182)
RGD PMID:16142217 PMID:23814182 PMID:18952566 PMID:21873635 MGI:3604839, RGD:2307417, RGD:13792537 NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 enables IBA
ISO
PMID:21873635
(MGI:4820682|PMID:20347422)
RGD PMID:20347422 PMID:21873635 MGI:4820682, RGD:13792537 NCBI chr20:29,379,444...29,400,131
Ensembl chr20:29,382,668...29,399,946
JBrowse link
G Eif4ebp3 eukaryotic translation initiation factor 4E binding protein 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:28,263,089...28,268,033
Ensembl chr18:28,162,311...28,268,024
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 enables IPI
ISO
IEA
(PMID:23814182)
GO_REF:0000107
RGD
Ensembl
PMID:23814182 PMID:18952566 GO_REF:0000107, RGD:2307417 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:12554669) RGD PMID:12554669 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator enables ISO UniProtKB:P06730 (PMID:20430826) RGD PMID:20430826 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G LOC100912373 uncharacterized LOC100912373 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:28,330,167...28,355,691 JBrowse link
eukaryotic initiation factor 4G binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4e eukaryotic translation initiation factor 4E enables IPI
ISO
(PMID:23814182)
(PMID:18337562)
(PMID:18337562), (PMID:23814182)
RGD PMID:18337562 PMID:23814182 PMID:18952566 RGD:2307417 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
eukaryotic initiation factor eIF2 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5 eukaryotic translation initiation factor 5 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10805737 PMID:21873635 RGD:10755758, RGD:13792537 Ensembl chr 6:130,589,143...130,597,656 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO UniProtKB:Q9BY44 (PMID:18816594) RGD PMID:18816594 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Nck1 NCK adaptor protein 1 enables ISO UniProtKB:P20042|UniProtKB:Q99L45 (PMID:11959995)
UniProtKB:Q99L45 (MGI:5613483|PMID:11959995)
RGD PMID:11959995 MGI:5613483 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300
JBrowse link
G NEWGENE_619861 eukaryotic translation initiation factor 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:130,589,200...130,597,656
Ensembl chr 6:130,589,143...130,597,656
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  molecular_function 20203
    binding 17217
      protein binding 14511
        translation initiation factor binding 40
          eukaryotic initiation factor 4E binding 9
          eukaryotic initiation factor 4G binding 1
          eukaryotic initiation factor eIF2 binding 4
paths to the root