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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of cellular catabolic process
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Accession:GO:0031331 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
Synonyms:exact_synonym: positive regulation of cellular breakdown;   positive regulation of cellular catabolism;   positive regulation of cellular degradation;   up regulation of cellular catabolic process;   upregulation of cellular catabolic process
 narrow_synonym: activation of cellular catabolic process;   stimulation of cellular catabolic process


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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPEB3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 10 92,046,692 92,291,499 RGD:2290271
G DHX36 DEAH-box helicase 36 JBrowse link 3 154,272,546 154,324,497 RGD:2290271
G DND1 DND microRNA-mediated repression inhibitor 1 JBrowse link 5 140,670,794 140,673,576 RGD:2290271
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 4 82,352,498 82,373,996 RGD:2290271
G KHSRP KH-type splicing regulatory protein JBrowse link 19 6,413,102 6,424,811 RGD:2290271
G MOV10 Mov10 RISC complex RNA helicase JBrowse link 1 112,674,312 112,702,377 RGD:2290271
G PLEKHN1 pleckstrin homology domain containing N1 JBrowse link 1 965,820 975,865 RGD:2290271
G QKI QKI, KH domain containing RNA binding JBrowse link 6 163,414,486 163,578,592 RGD:9068941
G RBM24 RNA binding motif protein 24 JBrowse link 6 17,281,361 17,293,875 RGD:2290271
G RC3H1 ring finger and CCCH-type domains 1 JBrowse link 1 173,931,084 174,022,357 RGD:2290271
G TARDBP TAR DNA binding protein JBrowse link 1 11,012,654 11,030,528 RGD:2290271
G TRIM71 tripartite motif containing 71 JBrowse link 3 32,817,997 32,897,824 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 37,474,518 37,484,377 RGD:2290271
G ZC3H12D zinc finger CCCH-type containing 12D JBrowse link 6 149,446,795 149,485,014 RGD:2290271
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:2290271
G ZFP36L1 ZFP36 ring finger protein like 1 JBrowse link 14 68,787,655 68,796,243 RGD:2290271
G ZFP36L2 ZFP36 ring finger protein like 2 JBrowse link 2 43,222,402 43,226,606 RGD:2290271
induction by virus of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 15 39,934,115 40,035,591 RGD:2290271
G PHB2 prohibitin 2 JBrowse link 12 6,965,327 6,970,753 RGD:2290271
mRNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNOT6L CCR4-NOT transcription complex subunit 6 like JBrowse link 4 77,713,387 77,820,269 RGD:2290271
G FTO FTO alpha-ketoglutarate dependent dioxygenase JBrowse link 16 53,703,963 54,121,941 RGD:2290271
G GIGYF2 GRB10 interacting GYF protein 2 JBrowse link 2 232,697,331 232,860,605 RGD:2290271
G HNRNPR heterogeneous nuclear ribonucleoprotein R JBrowse link 1 23,304,688 23,344,316 RGD:2290271
G METTL14 methyltransferase like 14 JBrowse link 4 118,685,375 118,715,430 RGD:2290271
G METTL16 methyltransferase like 16 JBrowse link 17 2,416,049 2,511,901 RGD:2290271
G METTL3 methyltransferase like 3 JBrowse link 14 21,498,138 21,511,340 RGD:2290271
G MEX3D mex-3 RNA binding family member D JBrowse link 19 1,554,669 1,568,325 RGD:2290271
G PUM1 pumilio RNA binding family member 1 JBrowse link 1 30,931,506 31,065,717 RGD:2290271
G RBM24 RNA binding motif protein 24 JBrowse link 6 17,281,361 17,293,875 RGD:2290271
G RIDA reactive intermediate imine deaminase A homolog JBrowse link 8 98,102,344 98,117,171 RGD:2290271
G ROCK1 Rho associated coiled-coil containing protein kinase 1 JBrowse link 18 20,946,906 21,111,813 RGD:2290271
G ROCK2 Rho associated coiled-coil containing protein kinase 2 JBrowse link 2 11,179,759 11,345,437 RGD:2290271
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 JBrowse link 20 63,195,429 63,216,131 RGD:2290271
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 1 28,736,621 28,769,775 RGD:2290271
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 JBrowse link 8 63,168,553 63,212,788 RGD:2290271
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G METTL16 methyltransferase like 16 JBrowse link 17 2,416,049 2,511,901 RGD:2290271
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G VPS13C vacuolar protein sorting 13 homolog C JBrowse link 15 61,852,389 62,060,465 RGD:2290271
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HDAC6 histone deacetylase 6 JBrowse link X 48,801,398 48,824,982 RGD:2290271
G MFN2 mitofusin 2 JBrowse link 1 11,980,181 12,013,515 RGD:2290271
G OPTN optineurin JBrowse link 10 13,100,082 13,138,308 RGD:2290271
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:2290271
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 7 99,027,435 99,144,118 RGD:2290271
positive regulation by symbiont of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATG5 autophagy related 5 JBrowse link 6 106,184,476 106,325,820 RGD:2290271
G ATG7 autophagy related 7 JBrowse link 3 11,272,348 11,564,652 RGD:2290271
G IRGM immunity related GTPase M JBrowse link 5 150,846,521 150,902,402 RGD:2290271
G ULK1 unc-51 like autophagy activating kinase 1 JBrowse link 12 131,894,622 131,923,150 RGD:2290271
G ULK2 unc-51 like autophagy activating kinase 2 JBrowse link 17 19,770,828 19,867,936 RGD:2290271
positive regulation of aggrephagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BAG3 BAG cochaperone 3 JBrowse link 10 119,651,380 119,677,819 RGD:2290271
G HSPB8 heat shock protein family B (small) member 8 JBrowse link 12 119,178,931 119,194,746 RGD:2290271
G HTT huntingtin JBrowse link 4 3,074,681 3,243,960 RGD:2290271
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDC20 cell division cycle 20 JBrowse link 1 43,358,981 43,363,203 RGD:2290271
G CDC20B cell division cycle 20B JBrowse link 5 55,112,971 55,173,177 RGD:2290271
G FZR1 fizzy and cell division cycle 20 related 1 JBrowse link 19 3,506,263 3,538,334 RGD:2290271
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:2290271
G ENDOG endonuclease G JBrowse link 9 128,818,402 128,822,676 RGD:2290271
G HSF1 heat shock transcription factor 1 JBrowse link 8 144,291,603 144,314,720 RGD:2290271
G IGFBP3 insulin like growth factor binding protein 3 JBrowse link 7 45,912,245 45,921,272 RGD:9068941
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:2290271
G ST20 suppressor of tumorigenicity 20 JBrowse link 15 79,898,842 79,923,752 RGD:2290271
positive regulation of autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BECN1 beclin 1 JBrowse link 17 42,810,132 42,824,316 RGD:9068941
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 JBrowse link 1 109,114,106 109,206,781 RGD:2290271
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 JBrowse link 9 127,451,486 127,503,501 RGD:2290271
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha JBrowse link 10 22,534,837 22,714,578 RGD:2290271
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta JBrowse link 17 38,765,691 38,799,905 RGD:2290271
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma JBrowse link 12 57,591,188 57,603,418 RGD:2290271
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 JBrowse link 2 135,052,281 135,176,667 RGD:2290271
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 JBrowse link 1 220,148,293 220,272,453 RGD:2290271
G RALB RAS like proto-oncogene B JBrowse link 2 120,252,850 120,294,711 RGD:2290271
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 JBrowse link 1 86,704,570 86,748,184 RGD:2290271
G ULK1 unc-51 like autophagy activating kinase 1 JBrowse link 12 131,894,622 131,923,150 RGD:2290271
positive regulation of autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADRB2 adrenoceptor beta 2 JBrowse link 5 148,826,611 148,828,623 RGD:2290271
G CALCOCO2 calcium binding and coiled-coil domain 2 JBrowse link 17 48,831,035 48,865,245 RGD:2290271
G CLEC16A C-type lectin domain containing 16A JBrowse link 16 10,944,488 11,193,272 RGD:2290271
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 JBrowse link 3 45,917,903 45,995,824 RGD:2290271
G IRGM immunity related GTPase M JBrowse link 5 150,846,521 150,902,402 RGD:2290271
G SMCR8 SMCR8-C9orf72 complex subunit JBrowse link 17 18,315,293 18,328,056 RGD:2290271
G UVRAG UV radiation resistance associated JBrowse link 11 75,815,189 76,144,232 RGD:2290271
positive regulation of autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC104389.5 novel transcript RGD:2290271
G AGER advanced glycosylation end-product specific receptor JBrowse link 6 32,180,968 32,184,380 RGD:9068941
G AMBRA1 autophagy and beclin 1 regulator 1 JBrowse link 11 46,396,412 46,594,055 RGD:2290271
G ATG16L1 autophagy related 16 like 1 JBrowse link 2 233,251,571 233,295,674 RGD:2290271
G ATG7 autophagy related 7 JBrowse link 3 11,272,348 11,564,652 RGD:9068941
G BAD BCL2 associated agonist of cell death JBrowse link 11 64,269,828 64,284,704 RGD:2290271
G BECN1 beclin 1 JBrowse link 17 42,810,132 42,824,316 RGD:9068941
G BNIP3 BCL2 interacting protein 3 JBrowse link 10 131,967,683 131,982,013 RGD:2290271
G DAPK1 death associated protein kinase 1 JBrowse link 9 87,497,228 87,708,634 RGD:2290271
G DCN decorin JBrowse link 12 91,140,484 91,182,817 RGD:2290271
G DHRSX dehydrogenase/reductase X-linked JBrowse link X
Y
2,219,506
2,219,506
2,500,976
2,500,976
RGD:2290271
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:2290271
G FOXO1 forkhead box O1 JBrowse link 13 40,555,667 40,666,641 RGD:2290271
G FOXO3 forkhead box O3 JBrowse link 6 108,559,825 108,684,774 RGD:2290271
G GSK3A glycogen synthase kinase 3 alpha JBrowse link 19 42,230,186 42,243,330 RGD:2290271
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:2290271
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:9068941
G HMGB1 high mobility group box 1 JBrowse link 13 30,456,704 30,617,597 RGD:2290271
G HMGB1P1 high mobility group box 1 pseudogene 1 JBrowse link 20 57,487,941 57,489,130 RGD:2290271
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:2290271
G IRGM immunity related GTPase M JBrowse link 5 150,846,521 150,902,402 RGD:2290271
G KAT5 lysine acetyltransferase 5 JBrowse link 11 65,712,018 65,719,604 RGD:2290271
G LRRK2 leucine rich repeat kinase 2 JBrowse link 12 40,224,890 40,369,285 RGD:2290271
G MAP2K1 mitogen-activated protein kinase kinase 1 JBrowse link 15 66,386,912 66,491,544 RGD:9068941
G MEFV MEFV innate immuity regulator, pyrin JBrowse link 16 3,242,027 3,256,776 RGD:2290271
G MID2 midline 2 JBrowse link X 107,825,735 107,931,637 RGD:2290271
G MTDH metadherin JBrowse link 8 97,643,972 97,730,260 RGD:2290271
G NPRL2 NPR2 like, GATOR1 complex subunit JBrowse link 3 50,347,330 50,350,821 RGD:2290271
G OPTN optineurin JBrowse link 10 13,100,082 13,138,308 RGD:2290271
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link 11 17,086,575 17,207,986 RGD:2290271
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta JBrowse link 3 138,652,698 138,834,928 RGD:2290271
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase JBrowse link X 48,913,182 48,919,024 RGD:2290271
G PLEKHF1 pleckstrin homology and FYVE domain containing 1 JBrowse link 19 29,665,422 29,675,477 RGD:2290271
G PLK2 polo like kinase 2 JBrowse link 5 58,453,982 58,460,139 RGD:2290271
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 5 40,759,379 40,798,195 RGD:2290271
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 1 56,645,314 56,715,335 RGD:2290271
G PRKD1 protein kinase D1 JBrowse link 14 29,576,479 29,927,847 RGD:2290271
G RNF152 ring finger protein 152 JBrowse link 18 61,808,067 61,894,420 RGD:2290271
G ROCK1 Rho associated coiled-coil containing protein kinase 1 JBrowse link 18 20,946,906 21,111,813 RGD:2290271
G SH3BP4 SH3 domain binding protein 4 JBrowse link 2 234,952,017 235,055,714 RGD:2290271
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 JBrowse link 1 86,704,570 86,748,184 RGD:2290271
G STK11 serine/threonine kinase 11 JBrowse link 19 1,205,778 1,228,431 RGD:2290271
G SVIP small VCP interacting protein JBrowse link 11 22,812,429 22,829,865 RGD:2290271
G TFEB transcription factor EB JBrowse link 6 41,683,978 41,736,223 RGD:2290271
G TICAM1 toll like receptor adaptor molecule 1 JBrowse link 19 4,815,932 4,831,712 RGD:2290271
G TLR9 toll like receptor 9 JBrowse link 3 52,221,080 52,226,163 RGD:9068941
G TMEM59 transmembrane protein 59 JBrowse link 1 54,026,681 54,053,573 RGD:2290271
G TP53INP1 tumor protein p53 inducible nuclear protein 1 JBrowse link 8 94,925,972 94,949,378 RGD:2290271
G TP53INP2 tumor protein p53 inducible nuclear protein 2 JBrowse link 20 34,704,344 34,713,439 RGD:2290271
G TPCN1 two pore segment channel 1 JBrowse link 12 113,221,429 113,298,589 RGD:2290271
G TRIM14 tripartite motif containing 14 JBrowse link 9 98,072,014 98,119,420 RGD:2290271
G TRIM21 tripartite motif containing 21 JBrowse link 11 4,384,897 4,393,702 RGD:2290271
G TRIM22 tripartite motif containing 22 JBrowse link 11 5,689,790 5,710,863 RGD:2290271
G TRIM27 tripartite motif containing 27 JBrowse link 6 28,903,002 28,923,985 RGD:2290271
G TRIM34 tripartite motif containing 34 JBrowse link 11 5,619,944 5,644,398 RGD:2290271
G TRIM38 tripartite motif containing 38 JBrowse link 6 25,962,723 25,991,231 RGD:2290271
G TRIM5 tripartite motif containing 5 JBrowse link 11 5,590,906 5,685,108 RGD:2290271
G TRIM6 tripartite motif containing 6 JBrowse link 11 5,596,111 5,612,952 RGD:2290271
G TRIM65 tripartite motif containing 65 JBrowse link 17 75,880,379 75,897,008 RGD:2290271
G TRIM68 tripartite motif containing 68 JBrowse link 11 4,598,672 4,608,231 RGD:2290271
G TRIM8 tripartite motif containing 8 JBrowse link 10 102,644,479 102,658,319 RGD:2290271
G TRIML1 tripartite motif family like 1 JBrowse link 4 188,137,229 188,150,768 RGD:2290271
G TRIML2 tripartite motif family like 2 JBrowse link 4 188,091,255 188,109,603 RGD:2290271
G TSC2 TSC complex subunit 2 JBrowse link 16 2,047,804 2,089,491 RGD:9068941
G UFL1 UFM1 specific ligase 1 JBrowse link 6 96,521,806 96,555,276 RGD:2290271
G ULK1 unc-51 like autophagy activating kinase 1 JBrowse link 12 131,894,622 131,923,150 RGD:2290271
G XBP1 X-box binding protein 1 JBrowse link 22 28,794,560 28,800,572 RGD:2290271
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 37,474,518 37,484,377 RGD:2290271
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCL2L11 BCL2 like 11 JBrowse link 2 111,120,914 111,168,445 RGD:2290271
G BID BH3 interacting domain death agonist JBrowse link 22 17,734,138 17,774,665 RGD:9068941
G DDIT3 DNA damage inducible transcript 3 JBrowse link 12 57,516,588 57,520,517 RGD:9068941
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BNIP3 BCL2 interacting protein 3 JBrowse link 10 131,967,683 131,982,013 RGD:2290271
G CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 JBrowse link 12 121,237,692 121,298,308 RGD:2290271
G FBXO7 F-box protein 7 JBrowse link 22 32,474,682 32,498,831 RGD:2290271
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:2290271
G HTT huntingtin JBrowse link 4 3,074,681 3,243,960 RGD:2290271
G PARK7 Parkinsonism associated deglycase JBrowse link 1 7,961,654 7,985,505 RGD:2290271
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:2290271
positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP5IF1 ATP synthase inhibitory factor subunit 1 JBrowse link 1 28,236,091 28,238,105 RGD:2290271
G GBA glucosylceramidase beta JBrowse link 1 155,234,452 155,244,627 RGD:2290271
G HK2 hexokinase 2 JBrowse link 2 74,834,126 74,893,359 RGD:2290271
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 JBrowse link 1 20,499,448 20,508,483 RGD:2290271
G PINK1 PTEN induced kinase 1 JBrowse link 1 20,633,458 20,651,511 RGD:9068941
positive regulation of cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMER1 APC membrane recruitment protein 1 JBrowse link X 64,185,117 64,205,708 RGD:2290271
G DACT1 dishevelled binding antagonist of beta catenin 1 JBrowse link 14 58,634,061 58,648,321 RGD:2290271
G EZR ezrin JBrowse link 6 158,765,744 158,819,368 RGD:2290271
G FAF1 Fas associated factor 1 JBrowse link 1 50,437,028 50,960,267 RGD:2290271
G FBXL5 F-box and leucine rich repeat protein 5 JBrowse link 4 15,604,381 15,681,544 RGD:2290271
G HAMP hepcidin antimicrobial peptide JBrowse link 19 35,282,528 35,285,143 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 14 102,080,742 102,139,749 RGD:2290271
G MSN moesin JBrowse link X 65,588,382 65,741,931 RGD:2290271
G PTTG1IP PTTG1 interacting protein JBrowse link 21 44,849,585 44,873,903 RGD:2290271
G RDX radixin JBrowse link 11 110,174,880 110,296,712 RGD:2290271
G TNFAIP3 TNF alpha induced protein 3 JBrowse link 6 137,866,317 137,883,312 RGD:2290271
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 6 33,696,764 33,711,700 RGD:2290271
G VGLL4 vestigial like family member 4 JBrowse link 3 11,556,067 11,720,715 RGD:2290271
G VPS11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 11 119,067,792 119,081,972 RGD:2290271
G VPS35 VPS35 retromer complex component JBrowse link 16 46,656,132 46,689,194 RGD:2290271
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PLK3 polo like kinase 3 JBrowse link 1 44,799,952 44,805,995 RGD:2290271
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:2290271
positive regulation of DNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCAP31 B cell receptor associated protein 31 JBrowse link X 153,700,492 153,724,746 RGD:2290271
G CAV1 caveolin 1 JBrowse link 7 116,525,009 116,561,185 RGD:2290271
G HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 JBrowse link 16 56,932,142 56,944,864 RGD:2290271
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:2290271
G SGTA small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 19 2,754,714 2,783,317 RGD:2290271
G UBQLN1 ubiquilin 1 JBrowse link 9 83,659,968 83,707,979 RGD:2290271
G UBQLN2 ubiquilin 2 JBrowse link X 56,563,627 56,567,868 RGD:2290271
G XBP1 X-box binding protein 1 JBrowse link 22 28,794,560 28,800,572 RGD:2290271
positive regulation of ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATXN3 ataxin 3 JBrowse link 14 92,058,552 92,106,621 RGD:2290271
G BAG6 BAG cochaperone 6 JBrowse link 6 31,639,028 31,660,900 RGD:2290271
G RNF185 ring finger protein 185 JBrowse link 22 31,160,182 31,207,019 RGD:2290271
G RNFT1 ring finger protein, transmembrane 1 JBrowse link 17 59,952,240 59,964,740 RGD:2290271
G TMEM259 transmembrane protein 259 JBrowse link 19 1,009,651 1,021,142 RGD:2290271
G TMEM67 transmembrane protein 67 JBrowse link 8 93,754,844 93,832,653 RGD:9068941
G USP13 ubiquitin specific peptidase 13 JBrowse link 3 179,653,040 179,789,401 RGD:2290271
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCD1 ATP binding cassette subfamily D member 1 JBrowse link X 153,724,851 153,744,755 RGD:2290271
G ABCD2 ATP binding cassette subfamily D member 2 JBrowse link 12 39,530,965 39,651,333 RGD:2290271
G ACSL5 acyl-CoA synthetase long chain family member 5 JBrowse link 10 112,374,116 112,428,380 RGD:9068941
G AKT2 AKT serine/threonine kinase 2 JBrowse link 19 40,230,317 40,285,531 RGD:2290271
G CPT1A carnitine palmitoyltransferase 1A JBrowse link 11 68,754,620 68,844,410 RGD:2290271
G FABP1 fatty acid binding protein 1 JBrowse link 2 88,122,982 88,128,062 RGD:2290271
G IRS1 insulin receptor substrate 1 JBrowse link 2 226,731,317 226,798,790 RGD:2290271
G IRS2 insulin receptor substrate 2 JBrowse link 13 109,752,695 109,786,583 RGD:2290271
G PLIN5 perilipin 5 JBrowse link 19 4,522,531 4,535,224 RGD:2290271
G PPARA peroxisome proliferator activated receptor alpha JBrowse link 22 46,150,526 46,243,756 RGD:2290271
G TWIST1 twist family bHLH transcription factor 1 JBrowse link 7 19,113,047 19,117,636 RGD:2290271
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PRKCD protein kinase C delta JBrowse link 3 53,161,209 53,192,717 RGD:2290271
positive regulation of glycogen catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADRA1B adrenoceptor alpha 1B JBrowse link 5 159,916,482 159,989,205 RGD:9068941
G HMGB1 high mobility group box 1 JBrowse link 13 30,456,704 30,617,597 RGD:9068941
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 JBrowse link 16 30,748,299 30,761,176 RGD:2290271
positive regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APP amyloid beta precursor protein JBrowse link 21 25,880,550 26,171,128 RGD:2290271
G ARNT aryl hydrocarbon receptor nuclear translocator JBrowse link 1 150,809,713 150,876,737 RGD:2290271
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) JBrowse link 14 73,955,329 74,019,326 RGD:2290271
G ESRRB estrogen related receptor beta JBrowse link 14 76,371,271 76,501,839 RGD:2290271
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 19 35,533,456 35,545,319 RGD:2290271
G GCK glucokinase JBrowse link 7 44,143,213 44,189,439 RGD:9068941
G GPD1 glycerol-3-phosphate dehydrogenase 1 JBrowse link 12 50,104,008 50,111,313 RGD:2290271
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:2290271
G HTR2A 5-hydroxytryptamine receptor 2A JBrowse link 13 46,831,546 46,898,082 RGD:2290271
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:2290271
G IGF1 insulin like growth factor 1 JBrowse link 12 102,395,860 102,481,839 RGD:2290271
G INS insulin JBrowse link 11 2,159,779 2,161,209 RGD:2290271
G INSR insulin receptor JBrowse link 19 7,112,257 7,294,414 RGD:2290271
G MIF macrophage migration inhibitory factor JBrowse link 22 23,894,383 23,895,223 RGD:9068941
G MLXIPL MLX interacting protein like JBrowse link 7 73,593,201 73,624,522 RGD:2290271
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:2290271
G P2RX7 purinergic receptor P2X 7 JBrowse link 12 121,132,819 121,188,032 RGD:2290271
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 JBrowse link X 54,932,961 55,000,052 RGD:2290271
G PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link 1 207,053,063 207,081,027 RGD:2290271
G PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 JBrowse link 10 6,144,918 6,254,648 RGD:2290271
G PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 JBrowse link 3 48,517,684 48,562,383 RGD:2290271
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 5 40,759,379 40,798,195 RGD:2290271
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 1 56,645,314 56,715,335 RGD:2290271
G PRXL2C peroxiredoxin like 2C JBrowse link 9 96,639,577 96,655,331 RGD:2290271
G PSEN1 presenilin 1 JBrowse link 14 73,136,436 73,223,691 RGD:2290271
G SLC4A4 solute carrier family 4 member 4 JBrowse link 4 71,062,646 71,572,083 RGD:2290271
G ZBTB20 zinc finger and BTB domain containing 20 JBrowse link 3 114,314,500 115,147,288 RGD:2290271
positive regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NNT nicotinamide nucleotide transhydrogenase JBrowse link 5 43,601,092 43,707,396 RGD:2290271
G SNCA synuclein alpha JBrowse link 4 89,724,099 89,838,324 RGD:2290271
positive regulation of lipophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADRB2 adrenoceptor beta 2 JBrowse link 5 148,826,611 148,828,623 RGD:2290271
G HTT huntingtin JBrowse link 4 3,074,681 3,243,960 RGD:2290271
G SESN2 sestrin 2 JBrowse link 1 28,259,452 28,282,491 RGD:2290271
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 JBrowse link 9 92,031,141 92,115,413 RGD:2290271
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 JBrowse link 14 77,505,997 77,616,663 RGD:2290271
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCA2 ATP binding cassette subfamily A member 2 JBrowse link 9 137,007,234 137,028,922 RGD:2290271
G APOE apolipoprotein E JBrowse link 19 44,905,796 44,909,395 RGD:2290271
G PCSK9 proprotein convertase subtilisin/kexin type 9 JBrowse link 1 55,039,548 55,064,853 RGD:2290271
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LDLR low density lipoprotein receptor JBrowse link 19 11,089,432 11,133,820 RGD:2290271
G LRP1 LDL receptor related protein 1 JBrowse link 12 57,128,401 57,213,377 RGD:2290271
G LRP2 LDL receptor related protein 2 JBrowse link 2 169,127,109 169,362,597 RGD:2290271
positive regulation of macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BNIP3 BCL2 interacting protein 3 JBrowse link 10 131,967,683 131,982,013 RGD:2290271
G BNIP3L BCL2 interacting protein 3 like JBrowse link 8 26,383,054 26,413,127 RGD:2290271
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link 9 27,546,546 27,573,866 RGD:2290271
G DCN decorin JBrowse link 12 91,140,484 91,182,817 RGD:2290271
G EPM2A EPM2A glucan phosphatase, laforin JBrowse link 6 145,382,540 145,736,023 RGD:2290271
G GNAI3 G protein subunit alpha i3 JBrowse link 1 109,548,615 109,600,195 RGD:2290271
G GPSM1 G protein signaling modulator 1 JBrowse link 9 136,327,539 136,359,605 RGD:2290271
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:2290271
G HMOX1 heme oxygenase 1 JBrowse link 22 35,381,096 35,394,207 RGD:2290271
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 154,541,238 154,565,046 RGD:2290271
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:2290271
G KDR kinase insert domain receptor JBrowse link 4 55,078,481 55,125,595 RGD:2290271
G LACRT lacritin JBrowse link 12 54,630,811 54,634,895 RGD:2290271
G LARP1 La ribonucleoprotein 1, translational regulator JBrowse link 5 154,682,979 154,817,605 RGD:2290271
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 JBrowse link 6 90,513,579 90,587,072 RGD:2290271
G PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link 11 117,144,284 117,178,173 RGD:2290271
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase JBrowse link X 48,913,182 48,919,024 RGD:2290271
G PINK1 PTEN induced kinase 1 JBrowse link 1 20,633,458 20,651,511 RGD:2290271
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 1 56,645,314 56,715,335 RGD:2290271
G RAB12 RAB12, member RAS oncogene family JBrowse link 18 8,609,428 8,639,383 RGD:2290271
G RUFY4 RUN and FYVE domain containing 4 JBrowse link 2 218,034,934 218,090,584 RGD:2290271
G SCOC short coiled-coil protein JBrowse link 4 140,257,308 140,385,728 RGD:2290271
G SESN1 sestrin 1 JBrowse link 6 108,984,309 109,094,846 RGD:2290271
G SESN2 sestrin 2 JBrowse link 1 28,259,452 28,282,491 RGD:2290271
G SESN3 sestrin 3 JBrowse link 11 95,165,513 95,232,536 RGD:2290271
G SIRT1 sirtuin 1 JBrowse link 10 67,884,656 67,918,390 RGD:2290271
G STING1 stimulator of interferon response cGAMP interactor 1 JBrowse link 5 139,475,533 139,482,758 RGD:2290271
G SUPT5H SPT5 homolog, DSIF elongation factor subunit JBrowse link 19 39,445,546 39,476,670 RGD:2290271
G TBK1 TANK binding kinase 1 JBrowse link 12 64,452,105 64,502,114 RGD:2290271
G TRIM13 tripartite motif containing 13 JBrowse link 13 49,997,042 50,018,467 RGD:2290271
G TSC1 TSC complex subunit 1 JBrowse link 9 132,891,349 132,945,269 RGD:2290271
G TSC2 TSC complex subunit 2 JBrowse link 16 2,047,804 2,089,491 RGD:2290271
G WAC WW domain containing adaptor with coiled-coil JBrowse link 10 28,532,772 28,623,112 RGD:2290271
positive regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAM8 ADAM metallopeptidase domain 8 JBrowse link 10 133,262,422 133,276,891 RGD:2290271
G ADAM9 ADAM metallopeptidase domain 9 JBrowse link 8 38,996,767 39,105,261 RGD:2290271
G ADRA2A adrenoceptor alpha 2A JBrowse link 10 111,077,029 111,080,907 RGD:2290271
G APOE apolipoprotein E JBrowse link 19 44,905,796 44,909,395 RGD:2290271
G APP amyloid beta precursor protein JBrowse link 21 25,880,550 26,171,128 RGD:2290271
G FURIN furin, paired basic amino acid cleaving enzyme JBrowse link 15 90,868,588 90,883,457 RGD:2290271
G GPLD1 glycosylphosphatidylinositol specific phospholipase D1 JBrowse link 6 24,423,969 24,495,232 RGD:2290271
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:2290271
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:2290271
G NRDC nardilysin convertase JBrowse link 1 51,789,192 51,878,937 RGD:2290271
G PACSIN3 protein kinase C and casein kinase substrate in neurons 3 JBrowse link 11 47,177,521 47,186,446 RGD:2290271
G RGMA repulsive guidance molecule BMP co-receptor a JBrowse link 15 93,035,271 93,089,211 RGD:2290271
G SH3D19 SH3 domain containing 19 JBrowse link 4 151,120,281 151,325,665 RGD:2290271
G SNX33 sorting nexin 33 JBrowse link 15 75,647,912 75,662,301 RGD:2290271
G SNX9 sorting nexin 9 JBrowse link 6 157,716,046 157,945,077 RGD:2290271
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:2290271
G TNFRSF1B TNF receptor superfamily member 1B JBrowse link 1 12,166,948 12,209,222 RGD:2290271
positive regulation of miRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LIN28B lin-28 homolog B JBrowse link 6 104,936,999 105,083,332 RGD:2290271
G PNPT1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 2 55,634,061 55,693,853 RGD:2290271
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 37,474,518 37,484,377 RGD:2290271
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRSF1 G-rich RNA sequence binding factor 1 JBrowse link 4 70,815,783 70,843,274 RGD:2290271
G PNPT1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 2 55,634,061 55,693,853 RGD:2290271
G SUPV3L1 Suv3 like RNA helicase JBrowse link 10 69,180,234 69,209,093 RGD:2290271
positive regulation of mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:9068941
G VPS13D vacuolar protein sorting 13 homolog D JBrowse link 1 12,230,030 12,512,047 RGD:2290271
positive regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDC37 cell division cycle 37, HSP90 cochaperone JBrowse link 19 10,391,128 10,403,568 RGD:2290271
G HDAC6 histone deacetylase 6 JBrowse link X 48,801,398 48,824,982 RGD:9068941
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 53,532,096 53,686,723 RGD:2290271
G PINK1 PTEN induced kinase 1 JBrowse link 1 20,633,458 20,651,511 RGD:2290271
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:2290271
G TOMM7 translocase of outer mitochondrial membrane 7 JBrowse link 7 22,812,974 22,822,849 RGD:2290271
positive regulation of mRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNOT1 CCR4-NOT transcription complex subunit 1 JBrowse link 16 58,519,951 58,629,826 RGD:2290271
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 8 17,221,981 17,246,909 RGD:2290271
G CNOT8 CCR4-NOT transcription complex subunit 8 JBrowse link 5 154,857,952 154,876,792 RGD:2290271
G GTPBP1 GTP binding protein 1 JBrowse link 22 38,704,561 38,738,265 RGD:2290271
G HNRNPR heterogeneous nuclear ribonucleoprotein R JBrowse link 1 23,304,688 23,344,316 RGD:9068941
G KHSRP KH-type splicing regulatory protein JBrowse link 19 6,413,102 6,424,811 RGD:2290271
G MOV10 Mov10 RISC complex RNA helicase JBrowse link 1 112,674,312 112,702,377 RGD:2290271
G PNPT1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 2 55,634,061 55,693,853 RGD:2290271
G PRR5L proline rich 5 like JBrowse link 11 36,296,288 36,465,204 RGD:2290271
G RC3H1 ring finger and CCCH-type domains 1 JBrowse link 1 173,931,084 174,022,357 RGD:2290271
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 19 18,831,405 18,868,230 RGD:2290271
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 37,474,518 37,484,377 RGD:2290271
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 JBrowse link 7 139,043,515 139,109,720 RGD:2290271
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:9068941
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO2 argonaute RISC catalytic component 2 JBrowse link 8 140,520,156 140,642,406 RGD:2290271
G CNOT1 CCR4-NOT transcription complex subunit 1 JBrowse link 16 58,519,951 58,629,826 RGD:2290271
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 8 17,221,981 17,246,909 RGD:2290271
G CPEB3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 10 92,046,692 92,291,499 RGD:2290271
G DHX36 DEAH-box helicase 36 JBrowse link 3 154,272,546 154,324,497 RGD:2290271
G NANOS1 nanos C2HC-type zinc finger 1 JBrowse link 10 119,029,714 119,033,730 RGD:2290271
G NANOS2 nanos C2HC-type zinc finger 2 JBrowse link 19 45,913,214 45,914,778 RGD:2290271
G NANOS3 nanos C2HC-type zinc finger 3 JBrowse link 19 13,862,036 13,880,757 RGD:2290271
G PABPC1 poly(A) binding protein cytoplasmic 1 JBrowse link 8 100,702,916 100,722,088 RGD:2290271
G TNRC6B trinucleotide repeat containing adaptor 6B JBrowse link 22 40,044,817 40,335,808 RGD:2290271
G TNRC6C trinucleotide repeat containing adaptor 6C JBrowse link 17 77,958,853 78,108,835 RGD:2290271
G TOB1 transducer of ERBB2, 1 JBrowse link 17 50,862,223 50,867,978 RGD:2290271
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:2290271
G ZFP36L1 ZFP36 ring finger protein like 1 JBrowse link 14 68,787,655 68,796,243 RGD:2290271
G ZFP36L2 ZFP36 ring finger protein like 2 JBrowse link 2 43,222,402 43,226,606 RGD:2290271
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO2 argonaute RISC catalytic component 2 JBrowse link 8 140,520,156 140,642,406 RGD:2290271
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 203,305,519 203,309,602 RGD:2290271
G CNOT1 CCR4-NOT transcription complex subunit 1 JBrowse link 16 58,519,951 58,629,826 RGD:2290271
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 8 17,221,981 17,246,909 RGD:2290271
G CPEB3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 10 92,046,692 92,291,499 RGD:2290271
G PABPC1 poly(A) binding protein cytoplasmic 1 JBrowse link 8 100,702,916 100,722,088 RGD:2290271
G POLR2G RNA polymerase II subunit G JBrowse link 11 62,761,580 62,766,710 RGD:2290271
G TNRC6A trinucleotide repeat containing adaptor 6A JBrowse link 16 24,610,205 24,826,223 RGD:2290271
G TNRC6B trinucleotide repeat containing adaptor 6B JBrowse link 22 40,044,817 40,335,808 RGD:2290271
G TNRC6C trinucleotide repeat containing adaptor 6C JBrowse link 17 77,958,853 78,108,835 RGD:2290271
G TOB1 transducer of ERBB2, 1 JBrowse link 17 50,862,223 50,867,978 RGD:2290271
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:2290271
positive regulation of phospholipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APOC2 apolipoprotein C2 JBrowse link 19 44,946,051 44,949,565 RGD:2290271
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BAG2 BAG cochaperone 2 JBrowse link 6 57,172,326 57,189,833 RGD:2290271
G DAB2IP DAB2 interacting protein JBrowse link 9 121,566,883 121,785,530 RGD:2290271
G DDRGK1 DDRGK domain containing 1 JBrowse link 20 3,190,350 3,204,682 RGD:2290271
G ECSCR endothelial cell surface expressed chemotaxis and apoptosis regulator JBrowse link 5 139,448,560 139,462,743 RGD:2290271
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:2290271
G FMR1 FMRP translational regulator 1 JBrowse link X 147,911,919 147,951,127 RGD:2290271
G KCNE2 potassium voltage-gated channel subfamily E regulatory subunit 2 JBrowse link 21 34,364,006 34,371,381 RGD:2290271
G NUPR1 nuclear protein 1, transcriptional regulator JBrowse link 16 28,532,708 28,538,974 RGD:2290271
G OSBPL7 oxysterol binding protein like 7 JBrowse link 17 47,807,367 47,821,822 RGD:2290271
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:2290271
G PSMC1 proteasome 26S subunit, ATPase 1 JBrowse link 14 90,256,553 90,275,429 RGD:2290271
G PSMC2 proteasome 26S subunit, ATPase 2 JBrowse link 7 103,344,405 103,369,395 RGD:2290271
G PSMC4 proteasome 26S subunit, ATPase 4 JBrowse link 19 39,971,005 39,981,764 RGD:2290271
G RNF40 ring finger protein 40 JBrowse link 16 30,761,612 30,800,231 RGD:2290271
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 JBrowse link 12 88,142,307 88,199,887 RGD:2290271
G TREM2 triggering receptor expressed on myeloid cells 2 JBrowse link 6 41,158,508 41,163,116 RGD:2290271
G XBP1 X-box binding protein 1 JBrowse link 22 28,794,560 28,800,572 RGD:9068941
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:2290271
G ANKIB1 ankyrin repeat and IBR domain containing 1 JBrowse link 7 92,245,974 92,401,383 RGD:2290271
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 JBrowse link 15 72,474,330 72,602,987 RGD:2290271
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 3 48,918,821 48,986,382 RGD:2290271
G ATG7 autophagy related 7 JBrowse link 3 11,272,348 11,564,652 RGD:9068941
G AURKA aurora kinase A JBrowse link 20 56,369,389 56,392,337 RGD:2290271
G AXIN1 axin 1 JBrowse link 16 287,440 355,226 RGD:9068941
G BAG2 BAG cochaperone 2 JBrowse link 6 57,172,326 57,189,833 RGD:2290271
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 4 121,824,329 121,870,497 RGD:2290271
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 16 88,874,858 88,977,207 RGD:2290271
G CEBPA CCAAT enhancer binding protein alpha JBrowse link 19 33,299,934 33,302,564 RGD:2290271
G CHFR checkpoint with forkhead and ring finger domains JBrowse link 12 132,832,356 132,887,618 RGD:2290271
G CLU clusterin JBrowse link 8 27,596,917 27,614,700 RGD:2290271
G COP1 COP1 E3 ubiquitin ligase JBrowse link 1 175,944,826 176,209,087 RGD:2290271
G CSNK1A1 casein kinase 1 alpha 1 JBrowse link 5 149,492,982 149,551,439 RGD:2290271
G CSNK1D casein kinase 1 delta JBrowse link 17 82,239,019 82,273,750 RGD:2290271
G CSNK1E casein kinase 1 epsilon JBrowse link 22 38,290,691 38,318,084 RGD:2290271
G DAB2 DAB adaptor protein 2 JBrowse link 5 39,371,674 39,425,233 RGD:2290271
G DDA1 DET1 and DDB1 associated 1 JBrowse link 19 17,309,563 17,323,301 RGD:2290271
G DDRGK1 DDRGK domain containing 1 JBrowse link 20 3,190,350 3,204,682 RGD:2290271
G DET1 DET1 partner of COP1 E3 ubiquitin ligase JBrowse link 15 88,501,919 88,546,703 RGD:2290271
G DNAJB2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 2 219,279,366 219,286,895 RGD:2290271
G DVL1 dishevelled segment polarity protein 1 JBrowse link 1 1,335,278 1,349,418 RGD:2290271
G FAM122A family with sequence similarity 122A JBrowse link 9 68,780,065 68,785,566 RGD:2290271
G FBXO22 F-box protein 22 JBrowse link 15 75,903,859 75,942,511 RGD:2290271
G GBA glucosylceramidase beta JBrowse link 1 155,234,452 155,244,627 RGD:2290271
G GCLC glutamate-cysteine ligase catalytic subunit JBrowse link 6 53,497,341 53,545,101 RGD:2290271
G GSK3A glycogen synthase kinase 3 alpha JBrowse link 19 42,230,186 42,243,330 RGD:2290271
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:2290271
G HSPA1A heat shock protein family A (Hsp70) member 1A JBrowse link 6 31,815,543 31,817,942 RGD:2290271
G HSPA1B heat shock protein family A (Hsp70) member 1B JBrowse link 6 31,827,738 31,830,254 RGD:2290271
G HSPBP1 HSPA (Hsp70) binding protein 1 JBrowse link 19 55,262,223 55,280,423 RGD:2290271
G IL33 interleukin 33 JBrowse link 9 6,214,591 6,257,983 RGD:2290271
G KEAP1 kelch like ECH associated protein 1 JBrowse link 19 10,486,125 10,503,356 RGD:2290271
G KLHL40 kelch like family member 40 JBrowse link 3 42,685,537 42,692,544 RGD:2290271
G LRRK2 leucine rich repeat kinase 2 JBrowse link 12 40,224,890 40,369,285 RGD:2290271
G MDM2 MDM2 proto-oncogene JBrowse link 12 68,808,149 68,850,686 RGD:2290271
G NKD2 NKD inhibitor of WNT signaling pathway 2 JBrowse link 5 1,008,802 1,038,943 RGD:2290271
G NOP53 NOP53 ribosome biogenesis factor JBrowse link 19 47,745,546 47,757,058 RGD:2290271
G NUB1 negative regulator of ubiquitin like proteins 1 JBrowse link 7 151,341,699 151,378,461 RGD:2290271
G PIAS1 protein inhibitor of activated STAT 1 JBrowse link 15 68,054,315 68,193,847 RGD:2290271
G PLK1 polo like kinase 1 JBrowse link 16 23,678,889 23,690,367 RGD:2290271
G PLK2 polo like kinase 2 JBrowse link 5 58,453,982 58,460,139 RGD:2290271
G PRICKLE1 prickle planar cell polarity protein 1 JBrowse link 12 42,456,757 42,589,755 RGD:2290271
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:2290271
G PSEN1 presenilin 1 JBrowse link 14 73,136,436 73,223,691 RGD:2290271
G PSEN2 presenilin 2 JBrowse link 1 226,870,572 226,903,829 RGD:9068941
G PSMD10 proteasome 26S subunit, non-ATPase 10 JBrowse link X 108,084,205 108,091,644 RGD:2290271
G RACK1 receptor for activated C kinase 1 JBrowse link 5 181,236,897 181,243,906 RGD:2290271
G RAD23A RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 12,945,814 12,953,643 RGD:2290271
G RBX1 ring-box 1 JBrowse link 22 40,951,378 40,973,309 RGD:2290271
G RCHY1 ring finger and CHY zinc finger domain containing 1 JBrowse link 4 75,479,037 75,515,057 RGD:2290271
G RFPL1 ret finger protein like 1 JBrowse link 22 29,403,031 29,442,490 RGD:2290271
G RNF14 ring finger protein 14 JBrowse link 5 141,966,807 141,990,292 RGD:2290271
G RNF144A ring finger protein 144A JBrowse link 2 6,917,412 7,076,886 RGD:2290271
G RNF144B ring finger protein 144B JBrowse link 6 18,387,329 18,468,870 RGD:2290271
G RNF180 ring finger protein 180 JBrowse link 5 64,165,311 64,372,879 RGD:2290271
G RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase JBrowse link 8 100,257,059 100,336,204 RGD:2290271
G RNF19B ring finger protein 19B JBrowse link 1 32,932,498 32,965,266 RGD:2290271
G RNF217 ring finger protein 217 JBrowse link 6 124,962,406 125,092,634 RGD:2290271
G SH3RF2 SH3 domain containing ring finger 2 JBrowse link 5 145,936,570 146,081,773 RGD:2290271
G SIRT2 sirtuin 2 JBrowse link 19 38,878,555 38,899,862 RGD:2290271
G SMAD7 SMAD family member 7 JBrowse link 18 48,919,853 48,950,711 RGD:2290271
G SOCS4 suppressor of cytokine signaling 4 JBrowse link 14 55,027,131 55,049,489 RGD:2290271
G SOCS5 suppressor of cytokine signaling 5 JBrowse link 2 46,698,960 46,763,129 RGD:2290271
G STUB1 STIP1 homology and U-box containing protein 1 JBrowse link 16 680,410 682,801 RGD:2290271
G SUMO1 small ubiquitin like modifier 1 JBrowse link 2 202,206,171 202,238,597 RGD:2290271
G SUMO2 small ubiquitin like modifier 2 JBrowse link 17 75,165,586 75,182,959 RGD:2290271
G TAF1 TATA-box binding protein associated factor 1 JBrowse link X 71,366,220 71,530,525 RGD:2290271
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough JBrowse link 22 38,290,691 38,398,915 RGD:2290271
G TRIB1 tribbles pseudokinase 1 JBrowse link 8 125,430,290 125,438,405 RGD:2290271
G TRIB2 tribbles pseudokinase 2 JBrowse link 2 12,716,872 12,742,734 RGD:2290271
G TRIB3 tribbles pseudokinase 3 JBrowse link 20 380,629 397,559 RGD:2290271
G UBE2V2 ubiquitin conjugating enzyme E2 V2 JBrowse link 8 47,997,527 48,064,708 RGD:9068941
G USP5 ubiquitin specific peptidase 5 JBrowse link 12 6,852,150 6,866,632 RGD:2290271
G VCP valosin containing protein JBrowse link 9 35,056,064 35,072,668 RGD:2290271
G ZER1 zyg-11 related cell cycle regulator JBrowse link 9 128,729,786 128,772,486 RGD:2290271
G ZFAND2A zinc finger AN1-type containing 2A JBrowse link 7 1,148,850 1,160,196 RGD:2290271
G ZYG11B zyg-11 family member B, cell cycle regulator JBrowse link 1 52,726,453 52,827,336 RGD:2290271
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PLK3 polo like kinase 3 JBrowse link 1 44,799,952 44,805,995 RGD:2290271
G SIRT2 sirtuin 2 JBrowse link 19 38,878,555 38,899,862 RGD:2290271
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CD81 CD81 molecule JBrowse link 11 2,376,177 2,397,419 RGD:2290271
G RNF128 ring finger protein 128 JBrowse link X 106,693,838 106,797,016 RGD:2290271
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP5IF1 ATP synthase inhibitory factor subunit 1 JBrowse link 1 28,236,091 28,238,105 RGD:2290271
G CTSC cathepsin C JBrowse link 11 88,293,592 88,337,736 RGD:2290271
G GBA glucosylceramidase beta JBrowse link 1 155,234,452 155,244,627 RGD:2290271
G RGN regucalcin JBrowse link X 47,078,355 47,093,314 RGD:2290271
positive regulation of receptor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DTX3L deltex E3 ubiquitin ligase 3L JBrowse link 3 122,564,338 122,575,203 RGD:2290271
G GIT1 GIT ArfGAP 1 JBrowse link 17 29,573,475 29,589,648 RGD:9068941
G HAMP hepcidin antimicrobial peptide JBrowse link 19 35,282,528 35,285,143 RGD:2290271
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 34,363,273 34,511,773 RGD:2290271
G PTPN1 protein tyrosine phosphatase non-receptor type 1 JBrowse link 20 50,510,321 50,585,241 RGD:2290271
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCAP31 B cell receptor associated protein 31 JBrowse link X 153,700,492 153,724,746 RGD:2290271
G EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 3 5,187,707 5,219,963 RGD:2290271
G EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 20 35,115,364 35,147,336 RGD:2290271
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 JBrowse link 17 79,730,919 79,742,926 RGD:2290271
G PRKCD protein kinase C delta JBrowse link 3 53,161,209 53,192,717 RGD:2290271
positive regulation of transcription factor catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FBXW8 F-box and WD repeat domain containing 8 JBrowse link 12 116,910,949 117,032,498 RGD:2290271
G MAPK8 mitogen-activated protein kinase 8 JBrowse link 10 48,306,639 48,439,360 RGD:9068941
G MAPK9 mitogen-activated protein kinase 9 JBrowse link 5 180,233,143 180,292,083 RGD:2290271
G SIRT6 sirtuin 6 JBrowse link 19 4,174,109 4,182,563 RGD:2290271
positive regulation of triglyceride catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AADAC arylacetamide deacetylase JBrowse link 3 151,814,008 151,828,488 RGD:2290271
G ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase JBrowse link 3 43,690,870 43,734,371 RGD:2290271
G APOA1 apolipoprotein A1 JBrowse link 11 116,835,751 116,837,950 RGD:2290271
G APOA4 apolipoprotein A4 JBrowse link 11 116,820,700 116,823,304 RGD:2290271
G APOA5 apolipoprotein A5 JBrowse link 11 116,789,367 116,792,420 RGD:2290271
G APOC2 apolipoprotein C2 JBrowse link 19 44,946,051 44,949,565 RGD:2290271
G APOH apolipoprotein H JBrowse link 17 66,212,033 66,229,415 RGD:9068941
G DAGLB diacylglycerol lipase beta JBrowse link 7 6,409,116 6,448,012 RGD:2290271
G FGF21 fibroblast growth factor 21 JBrowse link 19 48,755,524 48,758,330 RGD:2290271
G LDLR low density lipoprotein receptor JBrowse link 19 11,089,432 11,133,820 RGD:9068941
G PNPLA2 patatin like phospholipase domain containing 2 JBrowse link 11 818,890 825,573 RGD:2290271
G SIRT1 sirtuin 1 JBrowse link 10 67,884,656 67,918,390 RGD:9068941
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGBL4 ATP/GTP binding protein like 4 JBrowse link 1 48,520,157 50,023,954 RGD:2290271
G AGTPBP1 ATP/GTP binding protein 1 JBrowse link 9 85,546,539 85,742,029 RGD:2290271
G AXIN1 axin 1 JBrowse link 16 287,440 355,226 RGD:2290271
G CAV3 caveolin 3 JBrowse link 3 8,733,802 8,746,758 RGD:2290271
G CCDC22 coiled-coil domain containing 22 JBrowse link X 49,235,470 49,250,526 RGD:2290271
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 JBrowse link 17 47,967,904 47,981,786 RGD:2290271
G CLU clusterin JBrowse link 8 27,596,917 27,614,700 RGD:2290271
G DISC1 DISC1 scaffold protein JBrowse link 1 231,626,790 232,041,272 RGD:2290271
G EGF epidermal growth factor JBrowse link 4 109,912,883 110,013,766 RGD:2290271
G FBXO22 F-box protein 22 JBrowse link 15 75,903,859 75,942,511 RGD:9068941
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:2290271
G MAGEF1 MAGE family member F1 JBrowse link 3 184,710,364 184,712,064 RGD:2290271
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:2290271
G PTK2 protein tyrosine kinase 2 JBrowse link 8 140,657,900 141,002,079 RGD:2290271
G PTK2B protein tyrosine kinase 2 beta JBrowse link 8 27,311,478 27,459,391 RGD:2290271
G PYHIN1 pyrin and HIN domain family member 1 JBrowse link 1 158,931,547 158,990,909 RGD:2290271
G RNF139 ring finger protein 139 JBrowse link 8 124,474,880 124,488,618 RGD:2290271
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 7 99,027,435 99,144,118 RGD:2290271
G SUMO3 small ubiquitin like modifier 3 JBrowse link 21 44,805,617 44,818,129 RGD:9068941
G TRIM67 tripartite motif containing 67 JBrowse link 1 231,162,391 231,221,565 RGD:2290271
positive regulation of xenophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 JBrowse link 9 127,451,486 127,503,501 RGD:2290271
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:2290271
G NOD1 nucleotide binding oligomerization domain containing 1 JBrowse link 7 30,424,527 30,478,866 RGD:2290271
G NOD2 nucleotide binding oligomerization domain containing 2 JBrowse link 16 50,693,587 50,733,077 RGD:9068941
G OPTN optineurin JBrowse link 10 13,100,082 13,138,308 RGD:2290271
G RIPK2 receptor interacting serine/threonine kinase 2 JBrowse link 8 89,757,816 89,791,064 RGD:2290271
G TBK1 TANK binding kinase 1 JBrowse link 12 64,452,105 64,502,114 RGD:2290271
G TLR2 toll like receptor 2 JBrowse link 4 153,684,080 153,710,643 RGD:9068941
RNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DXO decapping exoribonuclease JBrowse link 6 31,969,811 31,972,290 RGD:2290271
G LIN28B lin-28 homolog B JBrowse link 6 104,936,999 105,083,332 RGD:2290271
G TNFRSF1B TNF receptor superfamily member 1B JBrowse link 1 12,166,948 12,209,222 RGD:2290271
G ZFP36 ZFP36 ring finger protein JBrowse link 19 39,406,847 39,409,407 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18536
    metabolic process 12194
      catabolic process 2831
        positive regulation of catabolic process 493
          positive regulation of cellular catabolic process 418
            RNA destabilization + 36
            positive regulation of DNA catabolic process + 7
            positive regulation of acetate catabolic process + 0
            positive regulation of autophagy + 143
            positive regulation of cell wall polysaccharide catabolic process + 0
            positive regulation of cellobiose catabolic process 0
            positive regulation of cellular alcohol catabolic process 0
            positive regulation of cellular amide catabolic process + 0
            positive regulation of cellular amine catabolic process + 0
            positive regulation of cellular protein catabolic process + 159
            positive regulation of cellulose catabolic process 0
            positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
            positive regulation of elastin catabolic process 0
            positive regulation of fatty acid beta-oxidation + 11
            positive regulation of ferulate catabolic process 0
            positive regulation of gamma-aminobutyric acid catabolic process 0
            positive regulation of glucocorticoid catabolic process 0
            positive regulation of glucosylceramide catabolic process 1
            positive regulation of glycogen catabolic process 3
            positive regulation of glycolytic process + 27
            positive regulation of hydrogen peroxide catabolic process 2
            positive regulation of juvenile hormone catabolic process 0
            positive regulation of mRNA catabolic process + 51
            positive regulation of membrane protein ectodomain proteolysis 17
            positive regulation of miRNA catabolic process 3
            positive regulation of mitochondrial RNA catabolic process + 3
            positive regulation of nucleotide catabolic process + 0
            positive regulation of ornithine catabolic process 0
            positive regulation of phospholipid catabolic process + 3
            positive regulation of prostaglandin catabolic process 0
            positive regulation of receptor catabolic process + 8
            positive regulation of starch catabolic process + 0
            positive regulation of syringal lignin catabolic process 0
            positive regulation of tRNA catabolic process + 0
            positive regulation of tetrapyrrole catabolic process + 0
            positive regulation of toluene catabolic process 0
            positive regulation of trehalose catabolic process 0
            positive regulation of triglyceride catabolic process 12
Path 2
Term Annotations click to browse term
  biological_process 18536
    biological regulation 13170
      regulation of biological process 12526
        regulation of metabolic process 7482
          regulation of catabolic process 1098
            positive regulation of catabolic process 493
              positive regulation of cellular catabolic process 418
                RNA destabilization + 36
                positive regulation of DNA catabolic process + 7
                positive regulation of acetate catabolic process + 0
                positive regulation of autophagy + 143
                positive regulation of cell wall polysaccharide catabolic process + 0
                positive regulation of cellobiose catabolic process 0
                positive regulation of cellular alcohol catabolic process 0
                positive regulation of cellular amide catabolic process + 0
                positive regulation of cellular amine catabolic process + 0
                positive regulation of cellular protein catabolic process + 159
                positive regulation of cellulose catabolic process 0
                positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
                positive regulation of elastin catabolic process 0
                positive regulation of fatty acid beta-oxidation + 11
                positive regulation of ferulate catabolic process 0
                positive regulation of gamma-aminobutyric acid catabolic process 0
                positive regulation of glucocorticoid catabolic process 0
                positive regulation of glucosylceramide catabolic process 1
                positive regulation of glycogen catabolic process 3
                positive regulation of glycolytic process + 27
                positive regulation of hydrogen peroxide catabolic process 2
                positive regulation of juvenile hormone catabolic process 0
                positive regulation of mRNA catabolic process + 51
                positive regulation of membrane protein ectodomain proteolysis 17
                positive regulation of miRNA catabolic process 3
                positive regulation of mitochondrial RNA catabolic process + 3
                positive regulation of nucleotide catabolic process + 0
                positive regulation of ornithine catabolic process 0
                positive regulation of phospholipid catabolic process + 3
                positive regulation of prostaglandin catabolic process 0
                positive regulation of receptor catabolic process + 8
                positive regulation of starch catabolic process + 0
                positive regulation of syringal lignin catabolic process 0
                positive regulation of tRNA catabolic process + 0
                positive regulation of tetrapyrrole catabolic process + 0
                positive regulation of toluene catabolic process 0
                positive regulation of trehalose catabolic process 0
                positive regulation of triglyceride catabolic process 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.