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ONTOLOGY REPORT - ANNOTATIONS


Term:extrinsic component of organelle membrane
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Accession:GO:0031312 term browser browse the term
Definition:The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
Synonyms:narrow_synonym: extrinsic to organelle membrane


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extrinsic component of organelle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbp1a FKBP prolyl isomerase 1A ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:147,042,944...147,062,725
Ensembl chr 3:147,042,944...147,062,724
JBrowse link
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein ISO (PMID:22472443), (PMID:26542808), (PMID:26756312) RGD PMID:22472443, PMID:26542808, PMID:26756312 NCBI chr10:109,271,161...109,278,745
Ensembl chr10:109,271,172...109,278,510
JBrowse link
extrinsic component of autophagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (PMID:22885598) RGD PMID:22885598 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Wdfy3 WD repeat and FYVE domain containing 3 ISO (MGI:MGI:3051925|PMID:15292400) RGD PMID:15292400 MGI:MGI:3051925 NCBI chr14:9,169,409...9,384,835
Ensembl chr14:9,141,512...9,381,870
JBrowse link
extrinsic component of endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 IDA RGD PMID:1717467 RGD:61536 NCBI chr10:47,525,486...47,546,535
Ensembl chr10:47,525,493...47,546,345
JBrowse link
G Ccdc115 coiled-coil domain containing 115 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:37,774,876...37,778,839
Ensembl chr 9:37,775,311...37,779,967
JBrowse link
G Gba2 glucosylceramidase beta 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:5484792|PMID:23250757)
UniProt
RGD
PMID:23250757 GO_REF:0000024, MGI:MGI:5484792 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Mmp27 matrix metallopeptidase 27 ISO (PMID:24548619) RGD PMID:24548619 NCBI chr 8:5,790,019...5,799,938
Ensembl chr 8:5,790,034...5,800,342
JBrowse link
G Otulinl OTU deubiquitinase with linear linkage specificity like ISS
ISO
IEA
GO_REF:0000024
(PMID:31056421)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31056421 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:80,383,642...80,408,672
Ensembl chr 2:80,383,643...80,408,672
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:4849347|PMID:21030605) RGD PMID:21030605 MGI:MGI:4849347 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Tor1a torsin family 1, member A ISO
ISS
(PMID:17037984)
GO_REF:0000024
RGD
UniProt
PMID:17037984 GO_REF:0000024 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISS
ISO
GO_REF:0000024
(MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671)
UniProt
RGD
PMID:26000482, PMID:26255671 GO_REF:0000024, MGI:MGI:5706859, MGI:MGI:5751631 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
extrinsic component of endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISS
ISO
GO_REF:0000024
(PMID:8885232)
UniProt
RGD
PMID:8885232 GO_REF:0000024 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Snap91 synaptosome associated protein 91 ISO (MGI:MGI:5707086|PMID:26412491) RGD PMID:26412491 MGI:MGI:5707086 NCBI chr 8:94,447,558...94,564,772
Ensembl chr 8:94,447,550...94,564,525
JBrowse link
G Snx10 sorting nexin 10 ISO (PMID:17012226) RGD PMID:17012226 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
G Snx16 sorting nexin 16 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:12813048)
Ensembl
UniProt
RGD
PMID:12813048, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 2:93,518,796...93,541,056
Ensembl chr 2:93,518,806...93,540,328
JBrowse link
G Snx5 sorting nexin 5 ISO
ISS
(PMID:15561769)
GO_REF:0000024
RGD
UniProt
PMID:15561769 GO_REF:0000024 NCBI chr 3:138,378,032...138,397,944
Ensembl chr 3:138,378,202...138,397,870
JBrowse link
G Usp50 ubiquitin specific peptidase 50 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:119,225,055...119,247,442
Ensembl chr 3:119,224,943...119,247,449
JBrowse link
G Usp8 ubiquitin specific peptidase 8 ISO
IBA
(MGI:MGI:3620312|PMID:16120644)
PMID:21873635
RGD PMID:16120644, PMID:21873635 MGI:MGI:3620312, RGD:13792537 NCBI chr 3:119,173,818...119,222,499
Ensembl chr 3:119,173,818...119,222,484
JBrowse link
G Wdr81 WD repeat domain 81 ISS
ISO
GO_REF:0000024
(PMID:26783301), (PMID:27126989)
UniProt
RGD
PMID:26783301, PMID:27126989 GO_REF:0000024 NCBI chr10:62,273,817...62,287,213
Ensembl chr10:62,273,800...62,287,189
JBrowse link
G Wdr91 WD repeat domain 91 ISO
ISS
(PMID:26783301)
GO_REF:0000024
RGD
UniProt
PMID:26783301 GO_REF:0000024 NCBI chr 4:62,398,073...62,438,958
Ensembl chr 4:62,398,797...62,438,958
JBrowse link
extrinsic component of Golgi membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07059632.3 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:28,220,398...28,224,858 JBrowse link
G Gba2 glucosylceramidase beta 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:5484792|PMID:23250757)
UniProt
RGD
PMID:23250757 GO_REF:0000024, MGI:MGI:5484792 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Golga3 golgin A3 ISO (PMID:14522980) RGD PMID:14522980 NCBI chr12:52,510,509...52,558,606
Ensembl chr12:52,512,970...52,558,606
JBrowse link
G Hid1 HID1 domain containing ISO (PMID:21337012) RGD PMID:21337012 NCBI chr10:103,899,160...103,919,649
Ensembl chr10:103,899,150...103,919,605
JBrowse link
G Nucb1 nucleobindin 1 IDA RGD PMID:9647645 RGD:9831131 NCBI chr 1:101,480,160...101,511,029
Ensembl chr 1:101,480,145...101,500,850
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO
ISS
(MGI:MGI:5689086|PMID:23708524)
GO_REF:0000024
RGD
GO_Central
PMID:23708524 GO_REF:0000024, MGI:MGI:5689086 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
extrinsic component of mitochondrial inner membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp23 ATP23 metallopeptidase and ATP synthase assembly factor homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,183,625...70,198,655
Ensembl chr 7:70,183,625...70,198,655
JBrowse link
G Coq3 coenzyme Q3 methyltransferase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:36,024,673...36,056,664
Ensembl chr 5:36,024,649...36,056,669
JBrowse link
G Coq4 coenzyme Q4 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:8,349,386...8,357,719
Ensembl chr 3:8,349,185...8,357,871
JBrowse link
G Coq5 coenzyme Q5, methyltransferase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr12:47,078,753...47,095,438
Ensembl chr12:47,078,753...47,095,438
JBrowse link
G Coq6 coenzyme Q6 monooxygenase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:108,076,393...108,087,782
Ensembl chr 6:108,076,306...108,087,696
JBrowse link
G Coq7 coenzyme Q7, hydroxylase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:188,176,060...188,190,874
Ensembl chr 1:188,174,874...188,190,860
JBrowse link
G Coq8a coenzyme Q8A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:98,451,629...98,480,438
Ensembl chr13:98,451,637...98,480,419
JBrowse link
G Coq8b coenzyme Q8B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,043,487...84,067,066
Ensembl chr 1:84,044,551...84,067,066
JBrowse link
G Dusp18 dual specificity phosphatase 18 IDA RGD PMID:18385140 RGD:7241011 NCBI chr14:84,150,484...84,169,645
Ensembl chr14:84,150,908...84,157,528
JBrowse link
G Dusp21 dual specificity phosphatase 21 IDA RGD PMID:18385140 RGD:7241011 NCBI chr  X:4,956,699...4,957,555
Ensembl chr  X:4,956,699...4,957,529
JBrowse link
G Ndufaf5 NADH:ubiquinone oxidoreductase complex assembly factor 5 ISO (PMID:18940309) RGD PMID:18940309 NCBI chr 3:133,232,412...133,261,932
Ensembl chr 3:133,232,432...133,261,973
JBrowse link
G Noa1 nitric oxide associated 1 colocalizes_with ISO (PMID:19103604) RGD PMID:19103604 NCBI chr14:33,107,868...33,124,172
Ensembl chr14:33,108,024...33,124,171
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IDA RGD PMID:16778770 RGD:7800724 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Pam16 presequence translocase associated motor 16 ISO (PMID:20053669) RGD PMID:20053669 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936
JBrowse link
extrinsic component of mitochondrial outer membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phb prohibitin IDA RGD PMID:7843414 RGD:1601307 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 ISO (MGI:MGI:3760489|PMID:17724133) RGD PMID:17724133 MGI:MGI:3760489 NCBI chr10:65,742,343...65,766,050
Ensembl chr10:65,742,343...65,766,050
JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:3768356 RGD:9850281 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Sox10 SRY-box transcription factor 10 ISO (MGI:MGI:3849366|PMID:19304657) RGD PMID:19304657 MGI:MGI:3849366 NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523
JBrowse link
G Synj2 synaptojanin 2 IDA RGD PMID:10357812 RGD:69391 NCBI chr 1:46,835,922...46,932,544
Ensembl chr 1:46,835,971...46,932,529
JBrowse link
G Synj2_v1 synaptojanin 2, variant 1 IDA RGD PMID:10357812 RGD:69391
extrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator IDA PMID:9697858 SynGO PMID:9697858 RGD:13702263 NCBI chr15:15,275,489...15,690,575
Ensembl chr15:15,275,541...15,667,778
JBrowse link
G Kif1a kinesin family member 1A IDA PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Stxbp5 syntaxin binding protein 5 ISO (MGI:MGI:5916110|PMID:28746398) RGD PMID:28746398 MGI:MGI:5916110 NCBI chr 1:3,858,917...4,011,684
Ensembl chr 1:3,858,909...4,011,511
JBrowse link
extrinsic component of omegasome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 ISO
IBA
(PMID:21518905)
PMID:21873635
RGD PMID:21518905, PMID:21873635 RGD:13792537 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (PMID:22885598) RGD PMID:22885598 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 ISO (PMID:19898463) RGD PMID:19898463 NCBI chr 6:107,031,411...107,080,590
Ensembl chr 6:107,031,412...107,080,524
JBrowse link
extrinsic component of phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 ISO
IBA
(PMID:21518905)
PMID:21873635
RGD PMID:21518905, PMID:21873635 RGD:13792537 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (PMID:22885598) RGD PMID:22885598 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 IDA
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635 RGD:12050105, RGD:13792537 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
extrinsic component of postsynaptic endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psd pleckstrin and Sec7 domain containing ISO
IEA
(MGI:MGI:5562465|PMID:24261326)
GO_REF:0000107
RGD
Ensembl
PMID:24261326 GO_REF:0000107, MGI:MGI:5562465 NCBI chr 1:266,059,331...266,074,774
Ensembl chr 1:266,059,331...266,074,181
JBrowse link
G Snx1 sorting nexin 1 ISO (MGI:MGI:5562465|PMID:24261326) RGD PMID:24261326 MGI:MGI:5562465 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Bin1 bridging integrator 1 IDA PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr18:25,163,575...25,222,139
Ensembl chr18:25,163,561...25,222,135
JBrowse link
G Cltc clathrin heavy chain IDA PMID:1325974 SynGO PMID:1325974 RGD:13702292 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Doc2a double C2 domain alpha IDA PMID:9115738 SynGO PMID:9115738 RGD:1357915 NCBI chr 1:198,282,828...198,288,611
Ensembl chr 1:198,284,473...198,288,113
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha IDA
IMP
PMID:11580898 SynGO PMID:11580898, PMID:11580898 RGD:13702369, RGD:13702369 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Syn1 synapsin I EXP
IDA
PMID:23622064 SynGO PMID:23622064, PMID:23622064 RGD:13702180, RGD:13702180 NCBI chr  X:1,321,315...1,379,202
Ensembl chr  X:1,321,315...1,379,198
JBrowse link
G Syn2 synapsin II IDA
IMP
PMID:2118908 SynGO PMID:2118908, PMID:2118908 RGD:13702354, RGD:13702354 NCBI chr 4:147,037,179...147,195,096
Ensembl chr 4:147,037,179...147,195,096
JBrowse link
G Syn3 synapsin III EXP
IDA
PMID:23622064
PMID:9539796
SynGO PMID:23622064, PMID:9539796, PMID:23622064 RGD:13702180, RGD:13702156, RGD:13702180 NCBI chr 7:23,403,896...23,808,602
Ensembl chr 7:23,403,891...23,808,602
JBrowse link
extrinsic component of vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vac14 VAC14 component of PIKFYVE complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:40,927,007...41,029,206
Ensembl chr19:40,927,007...41,029,206
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      extrinsic component of membrane 330
        extrinsic component of organelle membrane 63
          extrinsic component of Golgi membrane 5
          extrinsic component of dense core granule membrane + 3
          extrinsic component of endoplasmic reticulum membrane 8
          extrinsic component of endosome membrane + 12
          extrinsic component of intraperoxisomal membrane 0
          extrinsic component of mitochondrial inner membrane + 14
          extrinsic component of mitochondrial outer membrane 6
          extrinsic component of nuclear outer membrane 0
          extrinsic component of omegasome membrane 3
          extrinsic component of phagophore assembly site membrane 2
          extrinsic component of plastid membrane + 0
          extrinsic component of spine apparatus membrane 0
          extrinsic component of synaptic vesicle membrane 8
          extrinsic component of vacuolar membrane + 4
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13258
        membrane-bounded organelle 11449
          organelle membrane 2878
            extrinsic component of organelle membrane 63
              extrinsic component of Golgi membrane 5
              extrinsic component of dense core granule membrane + 3
              extrinsic component of endoplasmic reticulum membrane 8
              extrinsic component of endosome membrane + 12
              extrinsic component of intraperoxisomal membrane 0
              extrinsic component of mitochondrial inner membrane + 14
              extrinsic component of mitochondrial outer membrane 6
              extrinsic component of nuclear outer membrane 0
              extrinsic component of omegasome membrane 3
              extrinsic component of phagophore assembly site membrane 2
              extrinsic component of plastid membrane + 0
              extrinsic component of spine apparatus membrane 0
              extrinsic component of synaptic vesicle membrane 8
              extrinsic component of vacuolar membrane + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.