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ONTOLOGY REPORT - ANNOTATIONS


Term:pseudopodium organization
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Accession:GO:0031268 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pseudopodium, a temporary protrusion or retractile process of a cell, associated with cellular movement.
Synonyms:exact_synonym: pseudopodium organisation
 related_synonym: pseudopodium organization and biogenesis



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pseudopodium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab25 RAB25, member RAS oncogene family involved_in ISO (PMID:17925226) RGD PMID:17925226 NCBI chr 2:174,000,323...174,006,422
Ensembl chr 2:174,000,323...174,006,422
JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366584|PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024 MGI:4366584 NCBI chr13:42,745,956...42,967,083
Ensembl chr13:42,745,947...42,967,058
JBrowse link
positive regulation of pseudopodium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17192415)
GO_REF:0000107
RGD
Ensembl
PMID:17192415 GO_REF:0000107 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:11242036) RGD PMID:11242036 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:11035016) RGD PMID:11035016 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdc42ep1 CDC42 effector protein 1 involved_in IBA
ISO
PMID:21873635
(PMID:11035016)
RGD PMID:11035016 PMID:21873635 RGD:13792537 NCBI chr 7:110,395,287...110,403,203
Ensembl chr 7:110,395,332...110,403,200
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 involved_in IBA
ISO
PMID:21873635
(PMID:11035016)
RGD PMID:11035016 PMID:21873635 RGD:13792537 NCBI chr 1:203,202,000...203,210,891
Ensembl chr 1:203,201,873...203,210,897
JBrowse link
G Cdc42ep3 CDC42 effector protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:15,710,894...15,731,366
Ensembl chr 6:15,708,730...15,732,721
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 involved_in IBA
ISO
PMID:21873635
(PMID:11035016)
RGD PMID:11035016 PMID:21873635 RGD:13792537 NCBI chr10:98,772,613...98,797,924
Ensembl chr10:98,772,495...98,797,695
JBrowse link
G Cdc42ep5 CDC42 effector protein 5 involved_in ISO
IBA
(PMID:11035016)
PMID:21873635
RGD PMID:11035016 PMID:21873635 RGD:13792537 NCBI chr 1:70,035,921...70,038,990 JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2673740|PMID:12821670)
UniProt
RGD
PMID:12821670 GO_REF:0000024 MGI:2673740 NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP postnatal testicular germ cells RGD PMID:9283007 RGD:2292525 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G LOC691418 hypothetical protein LOC691418 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,163,898...106,167,404
Ensembl chr 3:106,157,382...106,167,831
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:22114305) RGD PMID:22114305 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
pseudopodium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 involved_in IDA PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
pseudopodium retraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Septin7 septin 7 acts_upstream_of_or_within ISO (MGI:5306816|PMID:22232702) RGD PMID:22232702 MGI:5306816 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    cellular process 18252
      cellular component organization or biogenesis 6492
        cellular component organization 6250
          cell projection organization 1747
            plasma membrane bounded cell projection organization 1708
              pseudopodium organization 16
                pseudopodium assembly + 14
                pseudopodium retraction + 1
paths to the root