ONTOLOGY REPORT - ANNOTATIONS
Term: biomineral tissue development
Accession: GO:0031214
browse the term
Definition: Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation.
Synonyms: xref: Wikipedia:Biomineralization
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Alpl
alkaline phosphatase, biomineralization associated
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
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Ambn
ameloblastin
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:19,601,761...19,614,382
Ensembl chr14:19,601,702...19,614,393
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Amelx
amelogenin, X-linked
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr X:25,076,362...25,087,660
Ensembl chr X:25,076,362...25,087,660
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Amtn
amelotin
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
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Bglap
bone gamma-carboxyglutamate protein
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
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Ddr2
discoidin domain receptor tyrosine kinase 2
involved_in
ISO
(PMID:19900459)
RGD
PMID:19900459
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
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Dmp1
dentin matrix acidic phosphoprotein 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
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Dspp
dentin sialophosphoprotein
IEP
RGD
PMID:20425127
RGD:4110819
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
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Ecm1
extracellular matrix protein 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079|MGI:2385534 (PMID:22359666), (PMID:25260930)
RGD
PMID:22359666 PMID:25260930
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fam20a
FAM20A, golgi associated secretory pathway pseudokinase
involved_in
ISO
(PMID:25789606)
RGD
PMID:25789606
NCBI chr10:94,638,836...94,697,814
Ensembl chr10:94,642,850...94,697,672
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Fam20c
FAM20C, golgi associated secretory pathway kinase
involved_in
ISO
(PMID:22582013), (PMID:25789606)
RGD
PMID:22582013 PMID:25789606
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
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Ibsp
integrin-binding sialoprotein
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693
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Mepe
matrix extracellular phosphoglycoprotein
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183
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Odam
odontogenic, ameloblast associated
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:20,193,286...20,202,517
Ensembl chr14:20,193,302...20,202,517
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Otop1
otopetrin 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:72,505,036...72,532,497
Ensembl chr14:72,503,592...72,532,497
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Prh1
proline rich protein HaeIII subfamily 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:166,543,755...166,547,614
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Prr4
proline rich 4
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:166,605,104...166,608,903
Ensembl chr 4:166,543,755...166,607,586
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Slc20a1
solute carrier family 20 member 1
acts_upstream_of_or_within
ISO
(PMID:27812542)
RGD
PMID:27812542
NCBI chr 3:116,427,095...116,441,049
Ensembl chr 3:116,427,098...116,441,051
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Srgn
serglycin
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:30,442,810...30,479,549
Ensembl chr20:30,442,813...30,457,406
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Tfip11
tuftelin interacting protein 11
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr12:44,299,619...44,311,851
Ensembl chr12:44,299,622...44,311,855
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Alox15
arachidonate 15-lipoxygenase
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1857428 (PMID:14716014) GO_REF:0000107
UniProt RGD Ensembl
PMID:14716014
GO_REF:0000024 GO_REF:0000107
NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
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Alpl
alkaline phosphatase, biomineralization associated
involved_in
ISS ISO
GO_REF:0000024 MGI:2183411|MGI:87983|MGI:97370 (PMID:10620060), (PMID:11028439), (PMID:12082181), (PMID:14982838), (PMID:15920156), (PMID:20684022), (PMID:26457330), (PMID:9056646)
UniProt RGD
PMID:9056646 PMID:10620060 PMID:11028439 PMID:12082181 PMID:14982838 PMID:15920156 PMID:20684022 PMID:26457330 More...
GO_REF:0000024
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
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Ankh
ANKH inorganic pyrophosphate transport regulator
involved_in
IEA ISO
GO_REF:0000107 MGI:1856651|MGI:2385534 (PMID:12817751)
Ensembl RGD
PMID:12817751
GO_REF:0000107
NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187
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Asgr2
asialoglycoprotein receptor 2
IEP
RGD
PMID:19841953
RGD:2316850
NCBI chr10:54,821,407...54,834,624
Ensembl chr10:54,821,438...54,834,617
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Aspn
asporin
involved_in
ISO
(PMID:19589127)
RGD
PMID:19589127
NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041
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Atf4
activating transcription factor 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:15109498)
UniProt RGD
PMID:15109498
GO_REF:0000024
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
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Axin2
axin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3579503 (PMID:19623616)
Ensembl RGD
PMID:19623616
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
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Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101948|MGI:1922667 (PMID:15657444), (PMID:19213727)
Ensembl RGD
PMID:15657444 PMID:19213727
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Cer1
cerberus 1, DAN family BMP antagonist
involved_in
ISO
(PMID:19113921)
RGD
PMID:19113921
NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
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Clec3b
C-type lectin domain family 3, member B
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:7798325) GO_REF:0000033
UniProt RGD GO_Central
PMID:7798325
GO_REF:0000024 GO_REF:0000033
NCBI chr 8:122,810,120...122,815,837
Ensembl chr 8:122,810,149...122,815,835
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Col1a2
collagen type I alpha 2 chain
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856327 (PMID:22910579)
Ensembl RGD
PMID:22910579
GO_REF:0000107
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:19248115)
RGD
PMID:19248115
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Comp
cartilage oligomeric matrix protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:27151399)
Ensembl RGD
PMID:27151399
GO_REF:0000107
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
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Cst5
cystatin D
involved_in
ISO
MGI:3629665 (PMID:16680148)
RGD
PMID:16680148
NCBI chr 3:137,573,194...137,577,754
Ensembl chr 3:137,573,194...137,577,754
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Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
ISO IEA
(PMID:17023519) GO_REF:0000107
RGD Ensembl
PMID:17023519
GO_REF:0000107
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Dlk1
delta like non-canonical Notch ligand 1
acts_upstream_of_or_within
ISO
MGI:3526402 (PMID:21308776)
RGD
PMID:21308776
NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522
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Duox2
dual oxidase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3712359 (PMID:17440044)
Ensembl RGD
PMID:17440044
GO_REF:0000107
NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
acts_upstream_of_or_within
ISO
MGI:2183829 (PMID:11997520)
RGD
PMID:11997520
NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in acts_upstream_of
ISO
(PMID:28652107) MGI:2385534 (PMID:21930712) MGI:1856651|MGI:1857079|MGI:2183411|MGI:2385534|MGI:3785162|MGI:6402836|MGI:87983|MGI:97370 (PMID:12082181), (PMID:12817751), (PMID:15920156), (PMID:24770645), (PMID:25368121), (PMID:26763447), (PMID:31666661)
RGD
PMID:12082181 PMID:12817751 PMID:15920156 PMID:21930712 PMID:24770645 PMID:25368121 PMID:26763447 PMID:28652107 PMID:31666661 More...
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
acts_upstream_of_or_within
ISO
MGI:2183949 (PMID:17020410)
RGD
PMID:17020410
NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
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Fbxl15
F-box and leucine-rich repeat protein 15
involved_in
IMP
PMID:21572392
UniProt
PMID:21572392
RGD:8554771
NCBI chr 1:245,189,732...245,191,973
Ensembl chr 1:245,189,736...245,192,007
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3044427 (PMID:12756187)
RGD
PMID:12756187
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Fgfr3
fibroblast growth factor receptor 3
involved_in
ISO
(PMID:20582225)
RGD
PMID:20582225
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Fgr
FGR proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:3665439 (PMID:16964445)
RGD
PMID:16964445
NCBI chr 5:145,189,814...145,219,571
Ensembl chr 5:145,189,841...145,217,326
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Fkrp
fukutin related protein
acts_upstream_of_or_within
ISO
MGI:4834518 (PMID:27109613), (PMID:29571322)
RGD
PMID:27109613 PMID:29571322
NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
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Fosl2
FOS like 2, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15509771)
Ensembl RGD
PMID:15509771
GO_REF:0000107
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
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Gata1
GATA binding protein 1
acts_upstream_of
ISO
MGI:2177586 (PMID:15005853)
RGD
PMID:15005853
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
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Gla
galactosidase, alpha
NOT|acts_upstream_of_or_within
ISO
MGI:1861794 (PMID:16697974)
RGD
PMID:16697974
NCBI chr X:97,769,227...97,780,646
Ensembl chr X:97,768,996...97,780,664
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Gpc3
glypican 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2159355 (PMID:15936336)
Ensembl RGD
PMID:15936336
GO_REF:0000107
NCBI chr X:131,868,986...132,236,824
Ensembl chr X:131,868,990...132,236,798
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Gpnmb
glycoprotein nmb
IEP
RGD
PMID:11746512
RGD:632991
NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857719 (PMID:17181398)
Ensembl RGD
PMID:17181398
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Ibsp
integrin-binding sialoprotein
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:3796255 (PMID:25464126)
GO_Central Ensembl RGD
PMID:25464126
GO_REF:0000033 GO_REF:0000107
NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693
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Icmt
isoprenylcysteine carboxyl methyltransferase
acts_upstream_of_or_within
ISO
MGI:1890508 (PMID:23686339)
RGD
PMID:23686339
NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128
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Ifitm5
interferon induced transmembrane protein 5
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:24519609) (PMID:20838829) (PMID:18442316) GO_REF:0000033
RGD GO_Central
PMID:18442316 PMID:20838829 PMID:24519609
GO_REF:0000033
NCBI chr 1:196,045,836...196,052,554
Ensembl chr 1:196,045,666...196,047,232
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Klf10
KLF transcription factor 10
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3530069 (PMID:15657444)
Ensembl RGD
PMID:15657444
GO_REF:0000107
NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
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Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:19605502)
UniProt RGD
PMID:19605502
GO_REF:0000024
NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
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Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
MGI:3610732 (PMID:19458888)
RGD
PMID:19458888
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
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Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of
ISO
MGI:2180017 (PMID:11790802)
RGD
PMID:11790802
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
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Mepe
matrix extracellular phosphoglycoprotein
acts_upstream_of
ISO
MGI:2448895 (PMID:12421822)
RGD
PMID:12421822
NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183
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Minpp1
multiple inositol-polyphosphate phosphatase 1
NOT|involved_in
ISO
(PMID:10938126)
RGD
PMID:10938126
NCBI chr 1:230,354,483...230,379,730
Ensembl chr 1:230,354,438...230,379,730
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Mmp13
matrix metallopeptidase 13
involved_in
IEA ISO
GO_REF:0000107 (PMID:17987127)
Ensembl RGD
PMID:17987127
GO_REF:0000107
NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
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Mtss1
MTSS I-BAR domain containing 1
acts_upstream_of_or_within
ISO
MGI:5319219 (PMID:21406566)
RGD
PMID:21406566
NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968
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Nfe2
nuclear factor, erythroid 2
acts_upstream_of
ISO
MGI:1857224 (PMID:15005853)
RGD
PMID:15005853
NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
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Nfix
nuclear factor I X
involved_in
ISO
MGI:3714028 (PMID:17353270)
RGD
PMID:17353270
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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Phex
phosphate regulating endopeptidase X-linked
acts_upstream_of_or_within
ISO
MGI:1857312 (PMID:15843468)
RGD
PMID:15843468
NCBI chr X:37,607,553...37,856,183
Ensembl chr X:37,610,760...37,854,469
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Phospho1
phosphoethanolamine/phosphocholine phosphatase 1
involved_in
ISO
(PMID:17227223), (PMID:20684022), (PMID:26457330)
RGD
PMID:17227223 PMID:20684022 PMID:26457330
NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342
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Pkdcc
protein kinase domain containing, cytoplasmic
acts_upstream_of_or_within
ISO
MGI:5014347 (PMID:21553379)
RGD
PMID:21553379
NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
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Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:4941929 (PMID:23913870)
Ensembl RGD
PMID:23913870
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Ptgs2
prostaglandin-endoperoxide synthase 2
acts_upstream_of_or_within
IMP
PMID:18519738
MGI
PMID:18519738
RGD:8554572
NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
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Pth
parathyroid hormone
acts_upstream_of
ISO
MGI:1889069|MGI:2665181 (PMID:19968565)
RGD
PMID:19968565
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
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Pth1r
parathyroid hormone 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154519 (PMID:11606467), (PMID:9832460)
Ensembl RGD
PMID:9832460 PMID:11606467
GO_REF:0000107
NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729
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Pthlh
parathyroid hormone-like hormone
involved_in acts_upstream_of NOT|acts_upstream_of_or_within
IEA ISO
GO_REF:0000002 MGI:1889069|MGI:2665181 (PMID:19968565) MGI:2154515 (PMID:11606467)
InterPro RGD
PMID:11606467 PMID:19968565
GO_REF:0000002
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
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Ptn
pleiotrophin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12413943)
Ensembl RGD
PMID:12413943
GO_REF:0000107
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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Rogdi
rogdi atypical leucine zipper
acts_upstream_of_or_within
ISO
(PMID:38172607)
RGD
PMID:38172607
NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452
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Ror2
receptor tyrosine kinase-like orphan receptor 2
IEP
RGD
PMID:23337931
RGD:11537369
NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
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Rspo2
R-spondin 2
acts_upstream_of_or_within
ISO
MGI:101948|MGI:88177 (PMID:19213727)
RGD
PMID:19213727
NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933
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Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2385534 (PMID:21930712)
Ensembl RGD
PMID:21930712
GO_REF:0000107
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
G
Sbds
Sbds, ribosome maturation factor
involved_in
ISO
(PMID:17920346)
RGD
PMID:17920346
NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649
G
Sbno2
strawberry notch homolog 2
acts_upstream_of_or_within
ISO
MGI:5551983 (PMID:23980096)
RGD
PMID:23980096
NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527
G
Slc24a3
solute carrier family 24 member 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:28602864)
Ensembl RGD
PMID:28602864
GO_REF:0000107
NCBI chr 3:132,552,119...133,051,192
Ensembl chr 3:132,551,595...133,051,192
G
Smpd3
sphingomyelin phosphodiesterase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856877 (PMID:21788370), (PMID:24585429)
Ensembl RGD
PMID:21788370 PMID:24585429
GO_REF:0000107
NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
G
Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO
MGI:2158693 (PMID:11371614)
RGD
PMID:11371614
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Spp1
secreted phosphoprotein 1
involved_in
ISO
MGI:1856651|MGI:2385534 (PMID:12817751)
RGD
PMID:12817751
NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
G
Tcf7l2
transcription factor 7 like 2
acts_upstream_of_or_within
ISO
MGI:101948 (PMID:19213727)
RGD
PMID:19213727
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:1921416 (PMID:27188440)
RGD
PMID:27188440
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:88177 (PMID:19213727)
RGD
PMID:19213727
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO
MGI:1888594 (PMID:23686339)
RGD
PMID:23686339
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
G
Ano6
anoctamin 6
acts_upstream_of_or_within
ISO
MGI:4127698 (PMID:22936354)
RGD
PMID:22936354
NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of
ISO
MGI:3840841 (PMID:21490954)
RGD
PMID:21490954
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
G
Ccdc154
coiled-coil domain containing 154
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:5702426 (PMID:20121924)
GO_Central RGD
PMID:20121924
GO_REF:0000033
NCBI chr10:14,177,271...14,187,378
Ensembl chr10:14,177,278...14,187,253
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079|MGI:2385534 (PMID:22359666), (PMID:25260930)
RGD
PMID:22359666 PMID:25260930
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Ift80
intraflagellar transport 80
acts_upstream_of_or_within
ISO
MGI:3689350|MGI:5818514 (PMID:26996322)
RGD
PMID:26996322
NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024
G
Igf1
insulin-like growth factor 1
involved_in
ISO IEA
(PMID:16433617) GO_REF:0000107
RGD Ensembl
PMID:16433617
GO_REF:0000107
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Lep
leptin
IDA
RGD
PMID:21353474
RGD:5128507
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
Phospho1
phosphoethanolamine/phosphocholine phosphatase 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:5049904 (PMID:21272676)
GO_Central RGD
PMID:21272676
GO_REF:0000033
NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342
G
Snx10
sorting nexin 10
acts_upstream_of_or_within
ISO
MGI:5690193 (PMID:25811986)
RGD
PMID:25811986
NCBI chr 4:80,612,648...80,677,005
Ensembl chr 4:80,612,669...80,676,996
G
Alpl
alkaline phosphatase, biomineralization associated
IEP
RGD
PMID:17043865
RGD:2316162
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
G
Ankh
ANKH inorganic pyrophosphate transport regulator
involved_in
IEA ISO
GO_REF:0000107 MGI:3608932|MGI:3785162 (PMID:31059863)
Ensembl RGD
PMID:31059863
GO_REF:0000107
NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1915401|MGI:2153568|MGI:3608932|MGI:3785162 (PMID:31059863)
RGD
PMID:31059863
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Fgfr1
Fibroblast growth factor receptor 1
involved_in
ISO
MGI:3608932|MGI:3785162 (PMID:31059863)
RGD
PMID:31059863
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Hacd1
3-hydroxyacyl-CoA dehydratase 1
involved_in
ISO
(PMID:25263524)
RGD
PMID:25263524
NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
G
Sp7
Sp7 transcription factor
involved_in
ISO
MGI:1915401|MGI:3608932|MGI:3785162|MGI:97370 (PMID:31059863)
RGD
PMID:31059863
NCBI chr 7:133,484,609...133,494,788
Ensembl chr 7:133,484,609...133,494,847
G
Wls
Wnt ligand secretion mediator
involved_in
ISO
MGI:2153568|MGI:97370 (PMID:31059863)
RGD
PMID:31059863
NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
G
Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
MGI:1856973 (PMID:23174213)
RGD
PMID:23174213
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Amelx
amelogenin, X-linked
involved_in
ISO IBA
(PMID:1916828) (PMID:26403673) GO_REF:0000033 (PMID:21653221)
RGD GO_Central
PMID:1916828 PMID:21653221 PMID:26403673
GO_REF:0000033
NCBI chr X:25,076,362...25,087,660
Ensembl chr X:25,076,362...25,087,660
G
Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:31942562
RGD:126928119
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
G
Cnnm4
cyclin and CBS domain divalent metal cation transport mediator 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:24339795)
Ensembl RGD
PMID:24339795
GO_REF:0000107
NCBI chr 9:38,711,726...38,750,942
Ensembl chr 9:38,711,710...38,750,942
G
Fam20a
FAM20A, golgi associated secretory pathway pseudokinase
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:21549343), (PMID:21990045), (PMID:23468644) MGI:5432376 (PMID:22732358) GO_REF:0000033
RGD GO_Central
PMID:21549343 PMID:21990045 PMID:22732358 PMID:23468644
GO_REF:0000033
NCBI chr10:94,638,836...94,697,814
Ensembl chr10:94,642,850...94,697,672
G
Fam20c
FAM20C, golgi associated secretory pathway kinase
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:5432377 (PMID:22732358)
GO_Central RGD
PMID:22732358
GO_REF:0000033
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
G
Foxo1
forkhead box O1
IEP
RGD
PMID:25183529
RGD:10044263
NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
G
Itgb6
integrin subunit beta 6
acts_upstream_of_or_within
ISO
MGI:1926484 (PMID:23264742)
RGD
PMID:23264742
NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926381 (PMID:10742104)
Ensembl RGD
PMID:10742104
GO_REF:0000107
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
G
Nectin1
nectin cell adhesion molecule 1
acts_upstream_of_or_within
ISO
MGI:3814719 (PMID:18703497)
RGD
PMID:18703497
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
G
Ppara
peroxisome proliferator activated receptor alpha
acts_upstream_of_or_within
ISO
MGI:1857774 (PMID:19320717)
RGD
PMID:19320717
NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
G
Rogdi
rogdi atypical leucine zipper
acts_upstream_of_or_within
ISO
(PMID:38172607)
RGD
PMID:38172607
NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452
G
Stim1
stromal interaction molecule 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:24621671)
UniProt RGD
PMID:24621671
GO_REF:0000024
NCBI chr 1:156,656,246...156,818,777
Ensembl chr 1:156,656,013...156,818,363
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179136 (PMID:19233155)
UniProt RGD
PMID:19233155
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
MGI:1856973 (PMID:23174213)
RGD
PMID:23174213
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Wdr72
WD repeat domain 72
acts_upstream_of_or_within
ISO
MGI:4363147|MGI:5913851 (PMID:25008349), (PMID:26247047)
RGD
PMID:25008349 PMID:26247047
NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
G
Gas6
growth arrest specific 6
involved_in
ISO ISS
(PMID:20048160) GO_REF:0000024
RGD UniProt
PMID:20048160
GO_REF:0000024
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:22110751)
RGD
PMID:22110751
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(PMID:22110751)
RGD
PMID:22110751
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:23583836)
Ensembl RGD
PMID:23583836
GO_REF:0000107
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:23583836), (PMID:26491108)
RGD
PMID:23583836 PMID:26491108
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO
UniProtKB:M3TYT0 (PMID:26634652)
RGD
PMID:26634652
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
ISO
UniProtKB:I3LFH3 (PMID:26634652)
RGD
PMID:26634652
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
G
Sox9
SRY-box transcription factor 9
involved_in
ISS ISO
GO_REF:0000024 (PMID:20056916) (PMID:22110751)
UniProt RGD
PMID:20056916 PMID:22110751
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(PMID:26634652)
RGD
PMID:26634652
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
AABR07034632.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Ahsg
alpha-2-HS-glycoprotein
involved_in
IMP ISS ISO IBA
GO_REF:0000024 (PMID:12556469) GO_REF:0000033
UniProt RGD GO_Central
PMID:12556469 PMID:8702833
GO_REF:0000024 GO_REF:0000033, RGD:1626074
NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
G
Bcor
BCL6 co-repressor
involved_in
ISO
(PMID:19578371)
RGD
PMID:19578371
NCBI chr X:10,609,756...10,729,613
Ensembl chr X:10,687,732...10,729,613
G
Ccl3
C-C motif chemokine ligand 3
involved_in
ISO
(PMID:21403648)
RGD
PMID:21403648
NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
G
Ccr1
C-C motif chemokine receptor 1
involved_in
ISO
(PMID:21403648)
RGD
PMID:21403648
NCBI chr 8:123,556,286...123,561,841
G
Ccr1l1
chemokine (C-C motif) receptor 1-like 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:123,589,997...123,613,767
Ensembl chr 8:123,589,621...123,612,687
G
Ecm1
extracellular matrix protein 1
involved_in
ISO IEA ISS
(PMID:11165938) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:11165938
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22510396), (PMID:25479107), (PMID:30111653)
UniProt RGD
PMID:22510396 PMID:25479107 PMID:30111653
GO_REF:0000024
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Fgf23
fibroblast growth factor 23
involved_in
ISO
(PMID:18282132)
RGD
PMID:18282132
NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821
G
Gata1
GATA binding protein 1
acts_upstream_of_or_within
ISO
MGI:2177586 (PMID:15005853)
RGD
PMID:15005853
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:15539560)
RGD
PMID:15539560
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857719 (PMID:17181398)
Ensembl RGD
PMID:17181398
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of_or_within
ISO
MGI:2180017 (PMID:11790802)
RGD
PMID:11790802
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
G
Mepe
matrix extracellular phosphoglycoprotein
acts_upstream_of_or_within
ISO
MGI:2448895 (PMID:12421822), (PMID:15843468), (PMID:22766095)
RGD
PMID:12421822 PMID:15843468 PMID:22766095
NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183
G
Nfe2
nuclear factor, erythroid 2
acts_upstream_of_or_within
ISO
MGI:1857224 (PMID:15005853)
RGD
PMID:15005853
NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
G
Ptk2b
protein tyrosine kinase 2 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:17537919)
UniProt RGD
PMID:17537919
GO_REF:0000024
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2158693 (PMID:11371614)
RGD
PMID:11371614
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Srgn
serglycin
involved_in
ISO IBA ISS
(PMID:16870619) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:16870619
GO_REF:0000024 GO_REF:0000033
NCBI chr20:30,442,810...30,479,549
Ensembl chr20:30,442,813...30,457,406
G
Trpm4
transient receptor potential cation channel, subfamily M, member 4
IMP
RGD
PMID:23081848
RGD:10003033
NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:15539560)
RGD
PMID:15539560
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Pth
parathyroid hormone
involved_in
IMP
PMID:11604398
CAFA
PMID:11604398
RGD:12793028
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
G
Rflna
refilin A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1923816 (PMID:24436304)
GO_Central RGD
PMID:24436304
GO_REF:0000033
NCBI chr12:31,633,360...31,642,313
Ensembl chr12:31,633,361...31,642,317
G
Rflnb
refilin B
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1920371 (PMID:24436304)
GO_Central RGD
PMID:24436304
GO_REF:0000033
NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
G
Aspn
asporin
involved_in
ISO
(PMID:17522060)
RGD
PMID:17522060
NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041
G
Bcor
BCL6 co-repressor
involved_in
ISO
(PMID:19578371)
RGD
PMID:19578371
NCBI chr X:10,609,756...10,729,613
Ensembl chr X:10,687,732...10,729,613
G
Atp2b2
ATPase plasma membrane Ca2+ transporting 2
acts_upstream_of_or_within
ISO
MGI:1857876 (PMID:9668038)
RGD
PMID:9668038
NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
G
Oc90
otoconin 90
involved_in
ISO
(PMID:21655225), (PMID:24748133)
RGD
PMID:21655225 PMID:24748133
NCBI chr 7:97,635,890...97,669,303
Ensembl chr 7:97,635,890...97,669,416
G
Otol1
otolin 1
involved_in
ISO
(PMID:21655225), (PMID:24748133), (PMID:29076638)
RGD
PMID:21655225 PMID:24748133 PMID:29076638
NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO
(PMID:20577052)
RGD
PMID:20577052
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Amtn
amelotin
involved_in
ISO
(PMID:25407797)
RGD
PMID:25407797
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
G
Atf4
activating transcription factor 4
acts_upstream_of_or_within
ISO
MGI:2180373|MGI:3819270|MGI:5550363|MGI:5812282 (PMID:27812542)
RGD
PMID:27812542
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
G
Cebpb
CCAAT/enhancer binding protein beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:27812542) GO_REF:0000107
RGD Ensembl
PMID:27812542
GO_REF:0000107
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Fbxo5
F-box protein 5
involved_in
ISO
(PMID:29850565)
RGD
PMID:29850565
NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
G
Odaph
odontogenesis associated phosphoprotein
involved_in
ISS ISO
GO_REF:0000024 (PMID:22901946)
UniProt RGD
PMID:22901946
GO_REF:0000024
NCBI chr14:16,071,835...16,080,151
Ensembl chr14:16,073,058...16,080,129
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Acvr2a
activin A receptor type 2A
involved_in
IEA ISO
GO_REF:0000107 (PMID:18436533)
Ensembl RGD
PMID:18436533
GO_REF:0000107
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
G
Acvr2b
activin A receptor type 2B
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
G
Adgrv1
adhesion G protein-coupled receptor V1
involved_in
ISO
(PMID:22419726)
RGD
PMID:22419726
NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
G
Adrb2
adrenoceptor beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1859675 (PMID:15724149)
Ensembl RGD
PMID:15724149
GO_REF:0000107
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
G
Alox5
arachidonate 5-lipoxygenase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24906289) GO_REF:0000107
UniProt RGD Ensembl
PMID:24906289
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
G
Ano6
anoctamin 6
involved_in
ISO
(PMID:25589784)
RGD
PMID:25589784
NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589
G
Atp2b1
ATPase plasma membrane Ca2+ transporting 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26392310) GO_REF:0000107
UniProt RGD Ensembl
PMID:26392310
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
G
Atraid
all-trans retinoic acid-induced differentiation factor
involved_in
ISO
(PMID:21723284)
RGD
PMID:21723284
NCBI chr 6:25,315,236...25,319,821
G
Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:20675382) (PMID:18436533), (PMID:20576608)
UniProt RGD
PMID:18436533 PMID:20576608 PMID:20675382
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
IDA ISO ISS IEA
(PMID:14749725) GO_REF:0000024 (PMID:14749725), (PMID:18436533) GO_REF:0000107
RGD UniProt Ensembl
PMID:14749725 PMID:18436533 PMID:15352071
GO_REF:0000024 GO_REF:0000107, RGD:9068399
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr1b
bone morphogenetic protein receptor type 1B
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Ccn1
cellular communication network factor 1
involved_in
ISO IEA
(PMID:20675382) GO_REF:0000107
RGD Ensembl
PMID:20675382
GO_REF:0000107
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
G
Cd276
Cd276 molecule
acts_upstream_of_or_within
ISO
MGI:3033707 (PMID:15317945)
RGD
PMID:15317945
NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:18434589
RGD:151665814
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Fam20c
FAM20C, golgi associated secretory pathway kinase
acts_upstream_of_or_within
ISO
(PMID:17369251), (PMID:22615579)
RGD
PMID:17369251 PMID:22615579
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
G
Fbn2
fibrillin 2
involved_in
ISO
(PMID:20855508)
RGD
PMID:20855508
NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:2135670 (PMID:20053668)
RGD
PMID:20053668
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Fzd9
frizzled class receptor 9
involved_in
ISS ISO
GO_REF:0000024 (PMID:21402791)
UniProt RGD
PMID:21402791
GO_REF:0000024
NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
G
Gpm6b
glycoprotein m6b
involved_in
ISS ISO
GO_REF:0000024 (PMID:21638316)
UniProt RGD
PMID:21638316
GO_REF:0000024
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
G
Isg15
ISG15 ubiquitin-like modifier
involved_in
ISO
(PMID:21402791)
RGD
PMID:21402791
NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435
G
Kl
Klotho
involved_in
ISO IEA
(PMID:12110410) GO_REF:0000107
RGD Ensembl
PMID:12110410
GO_REF:0000107
NCBI chr12:490,402...531,417
Ensembl chr12:490,399...530,080
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:21652706)
UniProt RGD
PMID:21652706
GO_REF:0000024
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Mia3
MIA SH3 domain ER export factor 3
acts_upstream_of_or_within
ISO
MGI:5007248 (PMID:21606205)
RGD
PMID:21606205
NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
G
Nell1
neural EGFL like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:21723284)
UniProt RGD
PMID:21723284
GO_REF:0000024
NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISO
UniProtKB:Q91ZD1 (PMID:21262216)
RGD
PMID:21262216
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Osr2
odd-skipped related transciption factor 2
involved_in
ISO
UniProtKB:Q9WVG7 (PMID:21262216)
RGD
PMID:21262216
NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
G
P2rx7
purinergic receptor P2X 7
acts_upstream_of_or_within
ISO
MGI:2386080 (PMID:12677010), (PMID:18519738)
RGD
PMID:12677010 PMID:18519738
NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
G
Pkdcc
protein kinase domain containing, cytoplasmic
involved_in
ISO
(PMID:19097194)
RGD
PMID:19097194
NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
G
Pla2g4a
phospholipase A2 group 4A
IEP
RGD
PMID:10807497
RGD:1642474
NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
G
Pth
parathyroid hormone
involved_in
IDA ISO
(PMID:17696759)
RGD
PMID:17696759 PMID:15758479 PMID:22445539
RGD:7207452 , RGD:7242906
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
G
Ptn
pleiotrophin
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19442624) GO_REF:0000107
UniProt RGD Ensembl
PMID:19442624
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Slc20a2
solute carrier family 20 member 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:30721528)
UniProt RGD
PMID:30721528
GO_REF:0000024
NCBI chr16:69,460,850...69,551,418
Ensembl chr16:69,460,462...69,521,711
G
Slc8a1
solute carrier family 8 member A1
involved_in
ISO IEA
(PMID:25589784) GO_REF:0000107
RGD Ensembl
PMID:25589784
GO_REF:0000107
NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
G
Smad3
SMAD family member 3
IDA
rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity
RGD
PMID:12096832
RGD:727387
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Tent5a
terminal nucleotidyltransferase 5A
involved_in
ISO
(PMID:33882302)
RGD
PMID:33882302
NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045
G
Tfap2a
transcription factor AP-2 alpha
involved_in
ISO ISS
(PMID:19578371) GO_REF:0000024
RGD UniProt
PMID:19578371
GO_REF:0000024
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Tmem119
transmembrane protein 119
involved_in
ISO IBA
(PMID:20025746) (PMID:20025746), (PMID:26207632) GO_REF:0000033
RGD GO_Central
PMID:20025746 PMID:26207632
GO_REF:0000033
NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:15728361)
RGD
PMID:15728361
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Wnt4
Wnt family member 4
involved_in
ISO IEA
(PMID:17720811) GO_REF:0000107
RGD Ensembl
PMID:17720811
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Actn3
actinin alpha 3
involved_in
ISO
(PMID:21784188)
RGD
PMID:21784188
NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
MGI:3840841 (PMID:21490954)
RGD
PMID:21490954
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO ISS
(PMID:16433617) GO_REF:0000024
RGD UniProt
PMID:16433617
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Amtn
amelotin
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:25407797) GO_REF:0000033 GO_REF:0000002
UniProt RGD GO_Central InterPro
PMID:25407797
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
G
Cftr
CF transmembrane conductance regulator
involved_in
IEA ISO
GO_REF:0000107 (PMID:26403673)
Ensembl RGD
PMID:26403673
GO_REF:0000107
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
G
Dspp
dentin sialophosphoprotein
acts_upstream_of_or_within
ISO
(PMID:16014627)
RGD
PMID:16014627
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
G
Enam
enamelin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3796583 (PMID:24603688)
GO_Central RGD
PMID:24603688
GO_REF:0000033
NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
G
Odaph
odontogenesis associated phosphoprotein
involved_in
ISO IBA IEA ISS
(PMID:22901946) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:22901946
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr14:16,071,835...16,080,151
Ensembl chr14:16,073,058...16,080,129
G
Slc4a2
solute carrier family 4 member 2
involved_in
ISO
(PMID:26403673)
RGD
PMID:26403673
NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
G
Tfap2a
transcription factor AP-2 alpha
involved_in
ISO ISS
(PMID:19578371) GO_REF:0000024
RGD UniProt
PMID:19578371
GO_REF:0000024
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Wnt6
Wnt family member 6
involved_in
ISO
(PMID:20113781)
RGD
PMID:20113781
NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
G
Ankh
ANKH inorganic pyrophosphate transport regulator
involved_in acts_upstream_of_or_within
TAS ISO IEA ISS
(PMID:10894769), (PMID:32639996) MGI:1856651 (PMID:10894769), (PMID:7276519) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:7276519 PMID:10894769 PMID:32639996 PMID:12861042
GO_REF:0000024 GO_REF:0000107, RGD:634632
NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187
G
Bglap
bone gamma-carboxyglutamate protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
G
Bmp2k
BMP-2 inducible kinase
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11500515)
GO_Central RGD
PMID:11500515
GO_REF:0000033
NCBI chr14:12,481,194...12,579,411
Ensembl chr14:12,484,729...12,579,134
G
Comp
cartilage oligomeric matrix protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21350216)
Ensembl RGD
PMID:21350216
GO_REF:0000107
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
G
Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
ISO IEA
(PMID:9415400) GO_REF:0000107
RGD Ensembl
PMID:9415400
GO_REF:0000107
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
G
Ddr2
discoidin domain receptor tyrosine kinase 2
involved_in
ISO
(PMID:20564243)
RGD
PMID:20564243
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
G
Dmp1
dentin matrix acidic phosphoprotein 1
TAS
RGD
PMID:8509401
RGD:728616
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
G
Ecm1
extracellular matrix protein 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:20138147)
GO_Central RGD
PMID:20138147
GO_REF:0000033
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Fgf23
fibroblast growth factor 23
acts_upstream_of_or_within
ISO
MGI:3512143 (PMID:15579309)
RGD
PMID:15579309
NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821
G
Gja1
gap junction protein, alpha 1
acts_upstream_of_or_within
ISO
MGI:2445468|MGI:3776013 (PMID:21346198)
RGD
PMID:21346198
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
G
Matn1
matrilin 1
acts_upstream_of_or_within
ISO
MGI:2153042|MGI:3663272 (PMID:16877353)
RGD
PMID:16877353
NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
G
Mgp
matrix Gla protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
G
Nbr1
NBR1, autophagy cargo receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:20616007)
Ensembl RGD
PMID:20616007
GO_REF:0000107
NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
G
Notum
NOTUM, palmitoleoyl-protein carboxylesterase
acts_upstream_of_or_within
ISO
(PMID:30622831)
RGD
PMID:30622831
NCBI chr10:105,933,245...105,940,327
Ensembl chr10:105,933,249...105,940,315
G
Omd
osteomodulin
NAS
RGD
PMID:10607915
RGD:633418
NCBI chr17:15,060,217...15,068,441
Ensembl chr17:15,060,217...15,068,441
G
S1pr1
sphingosine-1-phosphate receptor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:19204730)
UniProt RGD
PMID:19204730
GO_REF:0000024
NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
G
Sgms2
sphingomyelin synthase 2
involved_in
ISO IEA ISS
(PMID:30779713) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:30779713
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
G
Suv39h1
SUV39H1 histone lysine methyltransferase
acts_upstream_of_or_within
ISO
MGI:1890508 (PMID:23695662)
RGD
PMID:23695662
NCBI chr X:14,421,028...14,433,993
Ensembl chr X:14,421,109...14,433,982
G
Suv39h1-ps1
SUV39H1 histone lysine methyltransferase, pseudogene 1
acts_upstream_of_or_within
ISO
MGI:1890508 (PMID:23695662)
RGD
PMID:23695662
NCBI chr X:141,792,589...141,795,257
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:19597909)
RGD
PMID:19597909
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Txlng
taxilin gamma
involved_in
ISO
(PMID:15911876), (PMID:19016261)
RGD
PMID:15911876 PMID:19016261
NCBI chr X:31,864,111...31,912,931
Ensembl chr X:31,864,111...31,912,926
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO
MGI:1099440 (PMID:23695662)
RGD
PMID:23695662
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (PMID:20102707)
RGD
PMID:20102707
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Dmp1
dentin matrix acidic phosphoprotein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16014627)
Ensembl RGD
PMID:16014627
GO_REF:0000107
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of
ISO
MGI:7505608 (PMID:30243146), (PMID:31336344)
RGD
PMID:30243146 PMID:31336344
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Amelx
amelogenin, X-linked
involved_in
ISO
(PMID:1483698) (PMID:11406633)
RGD
PMID:1483698 PMID:11406633
NCBI chr X:25,076,362...25,087,660
Ensembl chr X:25,076,362...25,087,660
G
Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:17118335)
RGD
PMID:17118335
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:5607149 (PMID:29533727)
RGD
PMID:29533727
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Tspear
thrombospondin-type laminin G domain and EAR repeats
involved_in
ISO
(PMID:27736875)
RGD
PMID:27736875
NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all