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ONTOLOGY REPORT - ANNOTATIONS


Term:metallo-sulfur cluster assembly
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Accession:GO:0031163 term browser browse the term
Definition:The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.
Synonyms:exact_synonym: metal-sulfur cluster assembly;   metallo-sulphur cluster assembly
 related_synonym: metallo-sulfur cluster biosynthesis



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[2Fe-2S] cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOLA2B bolA family member 2B involved_in ISO (PMID:27519415) UniProt PMID:27519415 NCBI chr 3:18,345,691...18,351,508 JBrowse link
G FXN frataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:222,412,485...222,433,224
Ensembl chr 1:222,412,509...222,454,776
JBrowse link
G GLRX3 glutaredoxin 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:139,072,554...139,108,063
Ensembl chr14:139,072,575...139,111,249
JBrowse link
G GLRX5 glutaredoxin 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:116,787,346...116,797,477
Ensembl chr 7:116,787,432...116,800,554
JBrowse link
G HSCB HscB mitochondrial iron-sulfur cluster cochaperone involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr14:45,967,460...45,980,632
Ensembl chr14:45,967,502...45,980,622
JBrowse link
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,216,103...42,222,570
Ensembl chr14:42,216,111...42,222,711
JBrowse link
G LOC100526209 ferredoxin-2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,121,300...69,129,643
Ensembl chr 2:69,121,300...69,124,299
Ensembl chr 2:69,121,300...69,124,299
Ensembl chr 2:69,121,300...69,124,299
JBrowse link
G LYRM4 LYR motif containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:3,034,846...3,193,123
Ensembl chr 7:3,070,470...3,192,922
JBrowse link
G NDUFAB1 NADH:ubiquinone oxidoreductase subunit AB1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,619,458...22,631,575
Ensembl chr 3:22,619,492...22,635,288
JBrowse link
G NFS1 NFS1 cysteine desulfurase involved_in IEA InterPro
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,644...39,029,185
JBrowse link
[4Fe-4S] cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FXN frataxin involved_in
acts_upstream_of
IEA
ISO
(PMID:29576242) Ensembl
UniProt
PMID:29576242 GO_REF:0000107 NCBI chr 1:222,412,485...222,433,224
Ensembl chr 1:222,412,509...222,454,776
JBrowse link
G ISCU iron-sulfur cluster assembly enzyme acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:29309586)
(PMID:16527810), (PMID:23940031), (PMID:29576242)
UniProt
Ensembl
PMID:16527810 PMID:23940031 PMID:29309586 PMID:29576242 GO_REF:0000107 NCBI chr14:42,216,103...42,222,570
Ensembl chr14:42,216,111...42,222,711
JBrowse link
G LOC100526209 ferredoxin-2, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,121,300...69,129,643
Ensembl chr 2:69,121,300...69,124,299
Ensembl chr 2:69,121,300...69,124,299
Ensembl chr 2:69,121,300...69,124,299
JBrowse link
G LYRM4 LYR motif containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:3,034,846...3,193,123
Ensembl chr 7:3,070,470...3,192,922
JBrowse link
G NFS1 NFS1 cysteine desulfurase acts_upstream_of
involved_in
ISO
IEA
(PMID:16527810) UniProt
Ensembl
PMID:16527810 GO_REF:0000107 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,644...39,029,185
JBrowse link
iron incorporation into metallo-sulfur cluster term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FXN frataxin involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:222,412,485...222,433,224
Ensembl chr 1:222,412,509...222,454,776
JBrowse link
G NFS1 NFS1 cysteine desulfurase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,644...39,029,185
JBrowse link
iron-sulfur cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB7 ATP binding cassette subfamily B member 7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:60,186,559...60,313,098
Ensembl chr  X:60,186,814...60,313,064
JBrowse link
G BOLA2B bolA family member 2B involved_in ISO (PMID:27519415) ComplexPortal PMID:27519415 NCBI chr 3:18,345,691...18,351,508 JBrowse link
G CIAO1 cytosolic iron-sulfur assembly component 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
InterPro
UniProt
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:46,960,880...46,967,003
Ensembl chr 3:46,960,881...46,966,635
JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:107,951,618...107,969,306
Ensembl chr 1:107,951,646...107,969,298
JBrowse link
G CIAO2B cytosolic iron-sulfur assembly component 2B involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:27,610,469...27,612,617
Ensembl chr 6:27,610,470...27,612,592
JBrowse link
G CIAO3 cytosolic iron-sulfur assembly component 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:4946832|PMID:21367862)
GO_Central
Ensembl
GO_Central
MGI
PMID:21367862 PMID:21873635 GO_REF:0000107 MGI:4946832 NCBI chr 3:41,042,672...41,050,013
Ensembl chr 3:41,042,702...41,050,012
JBrowse link
G CIAPIN1 cytokine induced apoptosis inhibitor 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
UniProt
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 6:19,356,065...19,373,085
Ensembl chr 6:19,356,069...19,373,060
JBrowse link
G FXN frataxin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3770334|PMID:17597094)
(MGI:3611157|PMID:16278235)
InterPro
MGI
InterPro
Ensembl
PMID:16278235 PMID:17597094 GO_REF:0000002 GO_REF:0000107 MGI:3611157 MGI:3770334 NCBI chr 1:222,412,485...222,433,224
Ensembl chr 1:222,412,509...222,454,776
JBrowse link
G GLRX3 glutaredoxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:139,072,554...139,108,063
Ensembl chr14:139,072,575...139,111,249
JBrowse link
G HSCB HscB mitochondrial iron-sulfur cluster cochaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,967,460...45,980,632
Ensembl chr14:45,967,502...45,980,622
JBrowse link
G HSPA9 heat shock protein family A (Hsp70) member 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:140,515,239...140,532,164
Ensembl chr 2:140,515,253...140,531,857
JBrowse link
G IBA57 iron-sulfur cluster assembly factor IBA57 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:51,276,352...51,287,572
Ensembl chr 2:51,276,335...51,293,544
JBrowse link
G ISCA1 iron-sulfur cluster assembly 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr10:29,066,135...29,082,704
Ensembl chr10:29,066,178...29,080,757
JBrowse link
G ISCA2 iron-sulfur cluster assembly 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 7:97,740,479...97,746,491
Ensembl chr 7:97,740,491...97,743,911
JBrowse link
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr14:42,216,103...42,222,570
Ensembl chr14:42,216,111...42,222,711
JBrowse link
G LOC100513185 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr16:70,893,220...70,893,762 JBrowse link
G LYRM4 LYR motif containing 4 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:3,034,846...3,193,123
Ensembl chr 7:3,070,470...3,192,922
JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
UniProt
UniProt
PMID:21873635 GO_REF:0000104 GO_REF:0000107 NCBI chr14:108,853,038...108,886,587
Ensembl chr14:108,853,025...108,886,579
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 involved_in IEA UniProt
UniProt
GO_REF:0000104
G NFS1 NFS1 cysteine desulfurase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000117 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,644...39,029,185
JBrowse link
G NFU1 NFU1 iron-sulfur cluster scaffold involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:72,983,075...73,013,227
Ensembl chr 3:72,983,136...73,024,663
JBrowse link
G NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
Ensembl
InterPro
GO_Central
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:32,311,774...32,340,120
Ensembl chr 3:32,311,779...32,340,034
JBrowse link
G NUBP2 NUBP iron-sulfur cluster assembly factor 2, cytosolic involved_in IEA
IBA
(PMID:21873635) UniProt
UniProt
InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:40,178,417...40,184,646
Ensembl chr 3:40,178,417...40,186,551
JBrowse link
G NUBPL NUBP iron-sulfur cluster assembly factor, mitochondrial involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:67,785,652...68,028,561
Ensembl chr 7:67,784,639...68,028,552
JBrowse link
G XDH xanthine dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3770334|PMID:17597094) Ensembl
Ensembl
MGI
PMID:17597094 GO_REF:0000107 MGI:3770334 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169
JBrowse link
positive regulation of iron-sulfur cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB7 ATP binding cassette subfamily B member 7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:60,186,559...60,313,098
Ensembl chr  X:60,186,814...60,313,064
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17427
    cellular process 16433
      cellular component organization or biogenesis 6391
        cellular component biogenesis 3176
          cellular component assembly 2927
            metallo-sulfur cluster assembly 28
              iron-sulfur cluster assembly + 28
              metal incorporation into metallo-sulfur cluster + 2
              sulfur incorporation into metallo-sulfur cluster 0
paths to the root