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ONTOLOGY REPORT - ANNOTATIONS


Term:metallo-sulfur cluster assembly
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Accession:GO:0031163 term browser browse the term
Definition:The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.
Synonyms:exact_synonym: metal-sulfur cluster assembly;   metallo-sulphur cluster assembly
 related_synonym: metallo-sulfur cluster biosynthesis


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[2Fe-2S] cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bola2 bolA family member 2 involved_in ISO (PMID:27519415) RGD PMID:27519415 NCBI chr 1:198,120,104...198,121,158
Ensembl chr 1:198,120,099...198,121,158
JBrowse link
G Glrx3 glutaredoxin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:27519415)
UniProt
RGD
PMID:27519415 GO_REF:0000024 NCBI chr 1:209,768,696...209,799,912
Ensembl chr 1:209,768,696...209,799,903
JBrowse link
G Glrx5 glutaredoxin 5 involved_in ISO UniProtKB:Q02784 (PMID:23615440) RGD PMID:23615440 NCBI chr 6:128,750,503...128,760,880
Ensembl chr 6:128,750,795...128,760,880
JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,878,267...51,888,645
Ensembl chr12:51,878,153...51,888,669
JBrowse link
G Nfs1 NFS1 cysteine desulfurase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:151,665,813...151,688,151
Ensembl chr 3:151,665,814...151,688,149
Ensembl chr 3:151,665,814...151,688,149
JBrowse link
iron incorporation into metallo-sulfur cluster term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxn frataxin involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:12785837)
Ensembl
RGD
PMID:12785837, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:242,123,975...242,152,834
Ensembl chr 1:242,123,975...242,152,834
JBrowse link
G Nfs1 NFS1 cysteine desulfurase involved_in ISO (PMID:16847322)
(MGI:3763294|PMID:16847322)
RGD PMID:16847322 MGI:3763294 NCBI chr 3:151,665,813...151,688,151
Ensembl chr 3:151,665,814...151,688,149
Ensembl chr 3:151,665,814...151,688,149
JBrowse link
iron-sulfur cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb7 ATP binding cassette subfamily B member 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6695684|PMID:30765471)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30765471 GO_REF:0000024 GO_REF:0000107 MGI:6695684 NCBI chr  X:75,150,511...75,291,950
Ensembl chr  X:75,150,608...75,291,938
JBrowse link
G Ciao1 cytosolic iron-sulfur assembly component 1 involved_in IEA
IBA
ISS
ISO
GO_REF:0000104
PMID:21873635
GO_REF:0000024
UniProtKB:Q05583 (PMID:17937914), (PMID:23891004)
UniProt
RGD
PMID:17937914 PMID:23891004, PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 3:119,671,778...119,677,324
Ensembl chr 3:119,671,779...119,678,092
JBrowse link
G Ciao2a cytosolic iron-sulfur assembly component 2A involved_in ISO (PMID:23891004) RGD PMID:23891004 NCBI chr 8:71,786,336...71,798,258
Ensembl chr 8:71,786,310...71,798,266
JBrowse link
G Ciao2b cytosolic iron-sulfur assembly component 2B involved_in IBA
ISO
PMID:21873635
(PMID:23891004)
RGD PMID:23891004, PMID:21873635 RGD:13792537 NCBI chr19:551,708...553,573
Ensembl chr19:551,708...553,573
JBrowse link
G Ciao3 cytosolic iron-sulfur assembly component 3 involved_in
acts_upstream_of_or_within
ISO
ISS
IBA
(PMID:18270200)
MGI:4946833 (MGI:4946832|PMID:21367862)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:18270200 PMID:21367862, PMID:21873635 GO_REF:0000024 MGI:4946832, RGD:13792537 NCBI chr10:15,143,732...15,152,706
Ensembl chr10:15,143,713...15,153,396
JBrowse link
G Ciapin1 cytokine induced apoptosis inhibitor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,596,923...10,612,414
Ensembl chr19:10,596,960...10,610,049
JBrowse link
G Fxn frataxin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000002
MGI:2176228|MGI:2177176 (MGI:3611157|PMID:16278235), (MGI:3770334|PMID:17597094)
(PMID:29491838)
InterPro
RGD
PMID:16278235 PMID:17597094 PMID:29491838 GO_REF:0000002 MGI:3611157 MGI:3770334 NCBI chr 1:242,123,975...242,152,834
Ensembl chr 1:242,123,975...242,152,834
JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in ISO (PMID:20668094) RGD PMID:20668094 NCBI chr12:51,878,267...51,888,645
Ensembl chr12:51,878,153...51,888,669
JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6094650|PMID:26702583)
(PMID:26702583)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26702583 GO_REF:0000024 GO_REF:0000107 MGI:6094650 NCBI chr18:27,731,072...27,749,235
Ensembl chr18:27,731,072...27,749,235
JBrowse link
G Iba57 iron-sulfur cluster assembly factor IBA57 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,506,124...45,514,909
Ensembl chr10:45,504,504...45,514,878
JBrowse link
G Isca1 iron-sulfur cluster assembly 1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr17:5,281,727...5,294,386
Ensembl chr17:5,281,727...5,294,384
JBrowse link
G Isca2 iron-sulfur cluster assembly 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,488,678...108,490,188
Ensembl chr 6:108,488,678...108,490,188
JBrowse link
G Iscu iron-sulfur cluster assembly enzyme involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr12:48,621,454...48,627,297
Ensembl chr12:48,621,454...48,627,297
JBrowse link
G Lyrm4 LYR motif containing 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:29,439,042...29,552,773
Ensembl chr17:29,438,980...29,552,790
JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in ISO
IBA
(PMID:22678361), (PMID:22678362)
PMID:21873635
RGD PMID:22678361 PMID:22678362, PMID:21873635 RGD:13792537 NCBI chr 1:261,191,646...261,229,070
Ensembl chr 1:261,191,646...261,229,046
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:2,466,698...2,474,928
Ensembl chr 3:2,466,544...2,474,913
JBrowse link
G Nfs1 NFS1 cysteine desulfurase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:151,665,813...151,688,151
Ensembl chr 3:151,665,814...151,688,149
Ensembl chr 3:151,665,814...151,688,149
JBrowse link
G Nfu1 NFU1 iron-sulfur cluster scaffold involved_in ISO
IBA
(PMID:12886008), (PMID:28906594)
PMID:21873635
RGD PMID:12886008 PMID:28906594, PMID:21873635 RGD:13792537 NCBI chr 4:118,814,284...118,834,955
Ensembl chr 4:118,814,284...118,834,955
JBrowse link
G Nubp1 nucleotide binding protein 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:18573874)
UniProt
RGD
PMID:18573874, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:5,333,378...5,343,949
Ensembl chr10:5,333,378...5,344,121
JBrowse link
G Nubp2 nucleotide binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,244,201...14,247,930
Ensembl chr10:14,244,203...14,247,886
JBrowse link
G Nubpl nucleotide binding protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:72,891,758...73,147,837
Ensembl chr 6:72,891,725...73,148,536
JBrowse link
G Tst thiosulfate sulfurtransferase NAS RGD PMID:2018478 RGD:729953 NCBI chr 7:119,616,323...119,623,072
Ensembl chr 7:119,616,324...119,623,072
JBrowse link
G Xdh xanthine dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3770334|PMID:17597094)
Ensembl
RGD
PMID:17597094 GO_REF:0000107 MGI:3770334 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
positive regulation of iron-sulfur cluster assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb7 ATP binding cassette subfamily B member 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17192393)
(MGI:3619656|PMID:16467350)
UniProt
Ensembl
RGD
PMID:16467350 PMID:17192393 GO_REF:0000024 GO_REF:0000107 MGI:3619656 NCBI chr  X:75,150,511...75,291,950
Ensembl chr  X:75,150,608...75,291,938
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component biogenesis 3287
          cellular component assembly 2986
            metallo-sulfur cluster assembly 26
              iron-sulfur cluster assembly + 26
              metal incorporation into metallo-sulfur cluster + 2
              sulfur incorporation into metallo-sulfur cluster 0
paths to the root