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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of histone deacetylation
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Accession:GO:0031065 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
Synonyms:exact_synonym: up regulation of histone deacetylation;   upregulation of histone deacetylation
 narrow_synonym: activation of histone deacetylation;   stimulation of histone deacetylation



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positive regulation of histone deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in ISO (MGI:3852313|PMID:12198165) RGD PMID:12198165 MGI:3852313 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2135607 (MGI:5493185|PMID:23160044) RGD PMID:23160044 MGI:5493185 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in ISO (MGI:4867787|PMID:21124965) RGD PMID:21124965 MGI:4867787 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Jdp2 Jun dimerization protein 2 acts_upstream_of_or_within ISO MGI:1343091 (MGI:3807603|PMID:17464331) RGD PMID:17464331 MGI:3807603 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Lpin1 lipin 1 acts_upstream_of_or_within ISO (MGI:4819323|PMID:20385772) RGD PMID:20385772 MGI:4819323 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) RGD PMID:19037247 MGI:3821398 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:18854353) RGD PMID:18854353 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:11259576) RGD PMID:11259576 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO (PMID:21221920) RGD PMID:21221920 NCBI chr10:101,165,777...101,198,503
Ensembl chr10:101,165,856...101,198,502
JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO (PMID:16691198) RGD PMID:16691198 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3852313|PMID:12198165) RGD PMID:12198165 MGI:3852313 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of_or_within ISO (MGI:3760208|PMID:17636037) RGD PMID:17636037 MGI:3760208 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445), (MGI:3584056|PMID:15990875) RGD PMID:15657445 PMID:15990875 MGI:3528807 MGI:3584056 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445) RGD PMID:15657445 MGI:3528807 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5446998|PMID:22730529) RGD PMID:22730529 MGI:5446998 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 acts_upstream_of_or_within ISO (MGI:5902654|PMID:27798112) RGD PMID:27798112 MGI:5902654 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within ISO (MGI:5617128|PMID:25305081) RGD PMID:25305081 MGI:5617128 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO UniProtKB:Q9BZL6 (PMID:20497126) RGD PMID:20497126 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Prkd2 protein kinase D2 involved_in ISO UniProtKB:Q15139 (PMID:20497126) RGD PMID:20497126 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376
JBrowse link
G RGD735065 similar to GI:13385412-like protein splice form I involved_in ISO
ISS
IBA
IEA
(PMID:23460338)
GO_REF:0000024
PMID:21873635
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:23460338 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:7,322,483...7,362,054
Ensembl chr20:7,322,442...7,357,612
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
(PMID:20497126)
GO_REF:0000107
RGD
Ensembl
PMID:20497126 GO_REF:0000107 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      primary metabolic process 10967
        protein metabolic process 6117
          protein modification process 3743
            histone modification 529
              histone deacetylation 108
                positive regulation of histone deacetylation 29
                  positive regulation of histone deacetylase activity 6
Path 2
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      organic substance metabolic process 11752
        macromolecule metabolic process 10095
          protein metabolic process 6117
            protein modification process 3743
              protein deacylation 142
                protein deacetylation 130
                  histone deacetylation 108
                    regulation of histone deacetylation 46
                      positive regulation of histone deacetylation 29
                        positive regulation of histone deacetylase activity 6
paths to the root