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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of histone modification
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Accession:GO:0031058 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the covalent alteration of a histone.
Synonyms:exact_synonym: up regulation of histone modification;   upregulation of histone modification
 narrow_synonym: activation of histone modification;   stimulation of histone modification



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positive regulation of histone modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A IMP acetylation RGD PMID:20835911 RGD:8693751 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355
JBrowse link
positive regulation of histone acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO UniProtKB:P05067:PRO_0000000097|UniProtKB:P05067:PRO_0000000098 (PMID:19057576)
UniProtKB:P05067:PRO_0000000097|UniProtKB:P05067:PRO_0000000099 (PMID:19057576)
UniProtKB:P05067:PRO_0000000098|UniProtKB:P05067:PRO_0000000099 (PMID:19057576)
RGD PMID:19057576 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Arid5a AT-rich interaction domain 5A acts_upstream_of_or_within ISO (MGI:5317270|PMID:21346191) RGD PMID:21346191 MGI:5317270 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:16325578) RGD PMID:16325578 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IBA
(PMID:20820192)
(MGI:5009779|PMID:20820192)
PMID:21873635
RGD PMID:20820192 PMID:21873635 MGI:5009779, RGD:13792537 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Brd7 bromodomain containing 7 involved_in ISO (PMID:20228809) RGD PMID:20228809 NCBI chr19:18,708,792...18,737,500
Ensembl chr19:18,709,022...18,737,494
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:25263804 RGD:9588307 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within
ISO (PMID:19276356)
(MGI:3697020|PMID:17028180)
RGD PMID:17028180 PMID:19276356 MGI:3697020 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Glyr1 glyoxylate reductase 1 homolog involved_in ISO (PMID:29759984) RGD PMID:29759984 NCBI chr10:10,532,036...10,567,639
Ensembl chr10:10,532,154...10,567,637
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in ISO (MGI:5565664|PMID:24147056) RGD PMID:24147056 MGI:5565664 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:20018936) RGD PMID:20018936 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 acts_upstream_of_or_within ISO (MGI:3723398|PMID:17591696) RGD PMID:17591696 MGI:3723398 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO (MGI:4839449|PMID:16427017) RGD PMID:16427017 MGI:4839449 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4821506|PMID:20671152) RGD PMID:20671152 MGI:4821506 NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Rps6ka4 ribosomal protein S6 kinase A4 involved_in ISO (PMID:20018936) RGD PMID:20018936 NCBI chr 1:204,021,805...204,032,781
Ensembl chr 1:204,021,806...204,032,761
JBrowse link
G Rps6ka5 ribosomal protein S6 kinase A5 involved_in ISO (PMID:20018936) RGD PMID:20018936 NCBI chr 6:119,828,823...120,006,190
Ensembl chr 6:119,828,846...120,006,224
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:3770601|PMID:17905753) RGD PMID:17905753 MGI:3770601 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Tada2a transcriptional adaptor 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,966,502...69,014,149
Ensembl chr10:68,966,502...69,014,105
JBrowse link
G Tada2b transcriptional adaptor 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:74,279,286...74,290,758
Ensembl chr14:74,279,217...74,290,755
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:3584056 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 acts_upstream_of_or_within ISO (MGI:5902654|PMID:27798112) RGD PMID:27798112 MGI:5902654 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within ISO (MGI:5617128|PMID:25305081) RGD PMID:25305081 MGI:5617128 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO UniProtKB:Q9BZL6 (PMID:20497126) RGD PMID:20497126 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Prkd2 protein kinase D2 involved_in ISO UniProtKB:Q15139 (PMID:20497126) RGD PMID:20497126 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376
JBrowse link
G RGD735065 similar to GI:13385412-like protein splice form I involved_in ISO
IEA
IBA
ISS
(PMID:23460338)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23460338 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:7,322,483...7,362,054
Ensembl chr20:7,322,442...7,357,612
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
(PMID:20497126)
GO_REF:0000107
RGD
Ensembl
PMID:20497126 GO_REF:0000107 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
positive regulation of histone deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in ISO (MGI:3852313|PMID:12198165) RGD PMID:12198165 MGI:3852313 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2135607 (MGI:5493185|PMID:23160044) RGD PMID:23160044 MGI:5493185 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in ISO (MGI:4867787|PMID:21124965) RGD PMID:21124965 MGI:4867787 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Jdp2 Jun dimerization protein 2 acts_upstream_of_or_within ISO MGI:1343091 (MGI:3807603|PMID:17464331) RGD PMID:17464331 MGI:3807603 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Lpin1 lipin 1 acts_upstream_of_or_within ISO (MGI:4819323|PMID:20385772) RGD PMID:20385772 MGI:4819323 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) RGD PMID:19037247 MGI:3821398 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:18854353) RGD PMID:18854353 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:11259576) RGD PMID:11259576 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO (PMID:21221920) RGD PMID:21221920 NCBI chr10:101,165,777...101,198,503
Ensembl chr10:101,165,856...101,198,502
JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO (PMID:16691198) RGD PMID:16691198 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3852313|PMID:12198165) RGD PMID:12198165 MGI:3852313 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of_or_within ISO (MGI:3760208|PMID:17636037) RGD PMID:17636037 MGI:3760208 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445), (MGI:3584056|PMID:15990875) RGD PMID:15657445 PMID:15990875 MGI:3528807 MGI:3584056 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445) RGD PMID:15657445 MGI:3528807 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5446998|PMID:22730529) RGD PMID:22730529 MGI:5446998 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
positive regulation of histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:24526689) RGD PMID:24526689 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
positive regulation of histone H2B ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin-dependent kinase 9 involved_in ISO (PMID:19575011)
(MGI:5616315|PMID:19575011)
RGD PMID:19575011 MGI:5616315 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Rnf20 ring finger protein 20 involved_in ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 5:63,976,063...64,001,754
Ensembl chr 5:63,976,045...64,001,754
JBrowse link
G Rnf40 ring finger protein 40 involved_in ISO (PMID:19575011)
(MGI:5616315|PMID:19575011)
RGD PMID:19575011 MGI:5616315 NCBI chr 1:182,202,475...182,217,899
Ensembl chr 1:182,202,600...182,217,241
JBrowse link
positive regulation of histone H3-K14 acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:3046385|PMID:15087456) RGD PMID:15087456 MGI:3046385 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Kat2b lysine acetyltransferase 2B IMP RGD PMID:20094059 RGD:7364756 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 acts_upstream_of_or_within ISO (MGI:3723398|PMID:17591696) RGD PMID:17591696 MGI:3723398 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:5308479|PMID:22110608) RGD PMID:22110608 MGI:5308479 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Wbp2 WW domain binding protein 2 involved_in ISO
IEA
(PMID:23233354)
GO_REF:0000107
RGD
Ensembl
PMID:23233354 GO_REF:0000107 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
JBrowse link
positive regulation of histone H3-K27 acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lif LIF, interleukin 6 family cytokine involved_in ISO
IEA
(PMID:22783022)
GO_REF:0000107
RGD
Ensembl
PMID:22783022 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
positive regulation of histone H3-K27 methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eed embryonic ectoderm development acts_upstream_of_or_within ISO (MGI:4844067|PMID:17997413) RGD PMID:17997413 MGI:4844067 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in ISO (MGI:4429983|PMID:20144788), (MGI:4946172|PMID:21059868) RGD PMID:20144788 PMID:21059868 MGI:4429983 MGI:4946172 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24474760)
Ensembl
UniProt
RGD
PMID:24474760 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Phf1 PHD finger protein 1 involved_in ISO (PMID:23273982) RGD PMID:23273982 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Phf19 PHD finger protein 19 involved_in ISO (PMID:23104054)
(MGI:5318799|PMID:22438827), (MGI:5487476|PMID:23104054)
RGD PMID:22438827 PMID:23104054 MGI:5318799 MGI:5487476 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
positive regulation of histone H3-K27 trimethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO MGI:3840841 (MGI:3840399|PMID:19270745) RGD PMID:19270745 MGI:3840399 NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (MGI:5913752|PMID:20699224) RGD PMID:20699224 MGI:5913752 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833
JBrowse link
G Lcor ligand dependent nuclear receptor corepressor involved_in ISO (MGI:6159308|PMID:29628311) RGD PMID:29628311 MGI:6159308 NCBI chr 1:240,298,565...240,405,627
Ensembl chr 1:240,298,563...240,402,448
JBrowse link
positive regulation of histone H3-K36 trimethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:21555454) RGD PMID:21555454 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 involved_in ISO (PMID:21555454) RGD PMID:21555454 NCBI chr16:66,354,030...66,466,202
Ensembl chr16:66,358,973...66,465,423
JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISO (PMID:24634223) RGD PMID:24634223 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
positive regulation of histone H3-K4 methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 acts_upstream_of_or_within ISO (PMID:25519132) RGD PMID:25519132 NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA
ISO
GO_REF:0000107
(MGI:5009779|PMID:20820192)
(PMID:20820192)
Ensembl
RGD
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
(MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107 MGI:5428344 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:16024656)
(MGI:3849235|PMID:19345177)
RGD PMID:16024656 PMID:19345177 MGI:3849235 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISO (PMID:18413740) RGD PMID:18413740 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta involved_in ISO (PMID:18413740) RGD PMID:18413740 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Gcg glucagon involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1344416|MGI:1918367|MGI:2155884 (MGI:5529403|PMID:24051374)
Ensembl
RGD
PMID:24051374 GO_REF:0000107 MGI:5529403 NCBI chr 3:47,113,914...47,122,929
Ensembl chr 3:47,113,914...47,122,929
JBrowse link
G Hcfc1 host cell factor C1 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638
JBrowse link
G Kansl1 KAT8 regulatory NSL complex subunit 1 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr10:89,237,667...89,368,735
Ensembl chr10:89,237,667...89,366,951
JBrowse link
G Kansl2 KAT8 regulatory NSL complex subunit 2 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr 7:129,669,031...129,685,828
Ensembl chr 7:129,669,031...129,685,725
JBrowse link
G Kansl3 KAT8 regulatory NSL complex subunit 3 involved_in ISO
IEA
(PMID:24244196)
GO_REF:0000107
RGD
Ensembl
PMID:24244196 GO_REF:0000107 NCBI chr 9:38,562,170...38,605,757
Ensembl chr 9:38,562,177...38,605,692
JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (MGI:5607228|PMID:21113167) RGD PMID:21113167 MGI:5607228 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685
JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Nelfa negative elongation factor complex member A IMP RGD PMID:21623364 RGD:9693718 NCBI chr14:76,808,920...76,832,998
Ensembl chr14:76,808,870...76,832,994
JBrowse link
G Nelfe negative elongation factor complex member E IMP RGD PMID:21623364 RGD:9693718 NCBI chr20:3,976,512...3,982,389
Ensembl chr20:3,976,518...3,982,355
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO
IEA
(PMID:24244196)
GO_REF:0000107
RGD
Ensembl
PMID:24244196 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4354659|PMID:19583951), (MGI:4821506|PMID:20671152) RGD PMID:19583951 PMID:20671152 MGI:4354659 MGI:4821506 NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Phf20 PHD finger protein 20 involved_in ISO (PMID:24244196) RGD PMID:24244196 NCBI chr 3:144,710,253...144,816,696
Ensembl chr 3:144,710,353...144,814,439
JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) involved_in ISO (MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:3849235 NCBI chr 3:106,659,363...106,718,970
Ensembl chr 3:106,659,308...106,718,970
JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISO
IEA
ISS
(PMID:16024656)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16024656 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:55,103,542...55,120,837
Ensembl chr 8:55,103,545...55,120,813
JBrowse link
G Smad4 SMAD family member 4 involved_in ISO
IEA
(MGI:3769957|PMID:16330325)
GO_REF:0000107
RGD
Ensembl
PMID:16330325 GO_REF:0000107 MGI:3769957 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:19818711) RGD PMID:19818711 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Wdr5 WD repeat domain 5 involved_in ISO (PMID:24244196), (PMID:26324722) RGD PMID:24244196 PMID:26324722 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671
JBrowse link
positive regulation of histone H3-K79 methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:16024656) RGD PMID:16024656 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16024656)
UniProt
Ensembl
RGD
PMID:16024656 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:55,103,542...55,120,837
Ensembl chr 8:55,103,545...55,120,813
JBrowse link
positive regulation of histone H3-K9 acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
(PMID:20820192)
GO_REF:0000107
(MGI:5009779|PMID:20820192)
RGD
Ensembl
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:3046385|PMID:15087456) RGD PMID:15087456 MGI:3046385 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Kat2b lysine acetyltransferase 2B IMP RGD PMID:20094059 RGD:7364756 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 acts_upstream_of_or_within ISO (MGI:3723398|PMID:17591696) RGD PMID:17591696 MGI:3723398 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:5308479|PMID:22110608) RGD PMID:22110608 MGI:5308479 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3769957|PMID:16330325)
Ensembl
RGD
PMID:16330325 GO_REF:0000107 MGI:3769957 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:19729656) RGD PMID:19729656 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
JBrowse link
positive regulation of histone H3-K9 dimethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrtc2 DMRT-like family C2 acts_upstream_of_or_within ISO MGI:3711104 (MGI:3710435|PMID:17447844) RGD PMID:17447844 MGI:3710435 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
JBrowse link
G Prdm12 PR/SET domain 12 involved_in ISO
IBA
(PMID:26005867)
PMID:21873635
RGD PMID:26005867 PMID:21873635 RGD:13792537 NCBI chr 3:14,928,651...14,943,341
Ensembl chr 3:14,928,628...14,943,331
JBrowse link
positive regulation of histone H3-K9 methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in IEA
ISO
GO_REF:0000107
(MGI:5009779|PMID:20820192)
Ensembl
RGD
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Gfi1b growth factor independent 1B transcriptional repressor involved_in ISO (MGI:5284774|PMID:17707228) RGD PMID:17707228 MGI:5284774 NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942
JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in ISO (MGI:4441247|PMID:19010785) RGD PMID:19010785 MGI:4441247 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Prdm12 PR/SET domain 12 acts_upstream_of_or_within ISO (MGI:5774920|PMID:26005867)
(PMID:26005867)
RGD PMID:26005867 MGI:5774920 NCBI chr 3:14,928,651...14,943,341
Ensembl chr 3:14,928,628...14,943,331
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (MGI:5584328|PMID:24735877) RGD PMID:24735877 MGI:5584328 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
positive regulation of histone H3-K9 trimethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrtc2 DMRT-like family C2 acts_upstream_of_or_within ISO MGI:3711104 (MGI:3710435|PMID:17447844) RGD PMID:17447844 MGI:3710435 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
JBrowse link
G Lmna lamin A/C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5913114|PMID:23695662)
Ensembl
RGD
PMID:23695662 GO_REF:0000107 MGI:5913114 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in ISO (MGI:5811980|PMID:25722434) RGD PMID:25722434 MGI:5811980 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:2445449 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:2445449 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr  X:141,793,695...141,795,558 JBrowse link
positive regulation of histone H4 acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:16325578) RGD PMID:16325578 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:21856198) RGD PMID:21856198 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:174,635,559...174,640,738
Ensembl chr 2:174,635,995...174,640,733
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
positive regulation of histone H4-K16 acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 acts_upstream_of_or_within ISO (PMID:25519132) RGD PMID:25519132 NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
(PMID:20820192)
GO_REF:0000107
(MGI:5009779|PMID:20820192)
RGD
Ensembl
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
positive regulation of histone H4-K20 methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in IEA
ISO
GO_REF:0000107
(MGI:5009779|PMID:20820192)
(PMID:20820192)
Ensembl
RGD
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
positive regulation of histone methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in ISO (MGI:4462332|PMID:20168299) RGD PMID:20168299 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Chtop chromatin target of PRMT1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25284789)
UniProt
RGD
PMID:25284789 GO_REF:0000024 NCBI chr 2:175,981,266...175,992,854
Ensembl chr 2:175,981,271...175,992,748
JBrowse link
G Fam47a family with sequence similarity 47, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:42,762,231...42,763,887
Ensembl chr  X:42,762,229...42,763,883
JBrowse link
G Fam47e family with sequence similarity 47, member E involved_in ISO (PMID:33376131) RGD PMID:33376131 NCBI chr14:15,485,537...15,521,599
Ensembl chr14:15,485,127...15,521,775
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO MGI:5810650 (MGI:5700289|PMID:22770845) RGD PMID:22770845 MGI:5700289 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G LOC102552474 protein FAM47E-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,775,705...13,777,481
Ensembl chr  X:13,776,114...13,777,409
JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:3608952 (MGI:3607663|PMID:16195383) RGD PMID:16195383 MGI:3607663 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:22046413) RGD PMID:22046413 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1914617 (MGI:5447149|PMID:22862948) RGD PMID:22862948 MGI:5447149 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Paxbp1 PAX3 and PAX7 binding protein 1 acts_upstream_of_or_within ISO MGI:97491 (MGI:5447149|PMID:22862948) RGD PMID:22862948 MGI:5447149 NCBI chr11:30,272,037...30,301,504
Ensembl chr11:30,272,037...30,301,648
JBrowse link
G Rnf20 ring finger protein 20 acts_upstream_of_or_within ISO (MGI:5319125|PMID:22252316) RGD PMID:22252316 MGI:5319125 NCBI chr 5:63,976,063...64,001,754
Ensembl chr 5:63,976,045...64,001,754
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:4462332|PMID:20168299) RGD PMID:20168299 MGI:4462332 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:18485871) RGD PMID:18485871 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO (PMID:25284789) RGD PMID:25284789 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:25280941) RGD PMID:25280941 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of histone ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:5615026 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      primary metabolic process 10967
        protein metabolic process 6117
          protein modification process 3743
            histone modification 529
              positive regulation of histone modification 118
                positive regulation of histone acetylation + 32
                positive regulation of histone deacetylation + 29
                positive regulation of histone demethylase activity (H3-K4 specific) 0
                positive regulation of histone deubiquitination 1
                positive regulation of histone methylation + 61
                positive regulation of histone ubiquitination + 6
Path 2
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      organic substance metabolic process 11752
        macromolecule metabolic process 10095
          protein metabolic process 6117
            protein modification process 3743
              histone modification 529
                regulation of histone modification 195
                  positive regulation of histone modification 118
                    positive regulation of histone acetylation + 32
                    positive regulation of histone deacetylation + 29
                    positive regulation of histone demethylase activity (H3-K4 specific) 0
                    positive regulation of histone deubiquitination 1
                    positive regulation of histone methylation + 61
                    positive regulation of histone ubiquitination + 6
paths to the root