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ONTOLOGY REPORT - ANNOTATIONS


Term:pre-miRNA processing
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Accession:GO:0031054 term browser browse the term
Definition:Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
Synonyms:exact_synonym: pre-microRNA processing


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pre-miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:1624291
RGD:1600115
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:1624291
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1624291
RGD:1600115
G Ago3 argonaute RISC catalytic component 3 JBrowse link 5 144,355,792 144,436,509 RGD:1624291
G Ago4 argonaute RISC component 4 JBrowse link 5 144,501,875 144,557,165 RGD:1624291
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
RGD:13792537
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
RGD:13792537
G Lin28a lin-28 homolog A JBrowse link 5 152,230,343 152,247,873 RGD:1624291
G Lin28b lin-28 homolog B JBrowse link 20 50,482,536 50,580,273 RGD:1624291
G Mrpl44 mitochondrial ribosomal protein L44 JBrowse link 9 85,542,763 85,547,814 RGD:13792537
G Prkra protein activator of interferon induced protein kinase EIF2AK2 JBrowse link 3 63,489,081 63,507,918 RGD:1600115
RGD:1624291
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link 7 144,121,688 144,126,860 RGD:1600115
RGD:1624291
G Tut4 terminal uridylyl transferase 4 JBrowse link 5 128,063,880 128,168,726 RGD:1624291
RGD:13792537
G Tut7 terminal uridylyl transferase 7 JBrowse link 17 5,225,854 5,279,674 RGD:1624291
RGD:13792537
negative regulation of pre-miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcdin3d BCDIN3 domain containing RNA methyltransferase JBrowse link 7 141,132,106 141,136,700 RGD:1624291
RGD:1600115
RGD:13792537
G Lin28b lin-28 homolog B JBrowse link 20 50,482,536 50,580,273 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      gene silencing 240
        gene silencing by RNA 141
          production of small RNA involved in gene silencing by RNA 53
            production of miRNAs involved in gene silencing by miRNA 50
              pre-miRNA processing 15
                negative regulation of pre-miRNA processing 2
                positive regulation of pre-miRNA processing 0
                regulation of pre-miRNA processing + 2
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      organic substance metabolic process 11495
        macromolecule metabolic process 9944
          regulation of macromolecule metabolic process 6375
            negative regulation of macromolecule metabolic process 2957
              negative regulation of gene expression 2076
                gene silencing 240
                  gene silencing by RNA 141
                    post-transcriptional gene silencing by RNA 121
                      gene silencing by miRNA 114
                        production of miRNAs involved in gene silencing by miRNA 50
                          pre-miRNA processing 15
                            negative regulation of pre-miRNA processing 2
                            positive regulation of pre-miRNA processing 0
                            regulation of pre-miRNA processing + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.