ONTOLOGY REPORT - ANNOTATIONS
Term: pancreas development
Accession: GO:0031016
browse the term
Definition: The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones.
Synonyms: xref: Wikipedia:Pancreas
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Acvr2b
activin A receptor type 2B
acts_upstream_of_or_within
ISO
MGI:108051 (MGI:3758991|PMID:17849440)
RGD
PMID:17849440
MGI:3758991
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Afp
alpha-fetoprotein
IEP
RGD
PMID:17880577
RGD:2292043
NCBI chr14:17,573,412...17,591,476
Ensembl chr14:17,573,412...17,591,480
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
MGI:1857891|MGI:2180721 (MGI:3574230|PMID:15739227), (MGI:3588915|PMID:16026781)
RGD
PMID:15739227 PMID:16026781
MGI:3574230 MGI:3588915
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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Apc
APC regulator of WNT signaling pathway
IEP
RGD
PMID:16688812
RGD:4110129
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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Cckar
cholecystokinin A receptor
IEP
RGD
PMID:10403848
RGD:2313336
NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747
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Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148569 (MGI:3607950|PMID:16192304)
Ensembl RGD
PMID:16192304
GO_REF:0000107 MGI:3607950
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
acts_upstream_of_or_within
ISO
MGI:2183829 (MGI:2179907|PMID:11997520)
RGD
PMID:11997520
MGI:2179907
NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (MGI:3056270|PMID:15329346)
RGD
PMID:15329346
MGI:3056270
NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
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Foxf1
forkhead box F1
involved_in
ISO
(PMID:19500772)
RGD
PMID:19500772
NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
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Gata6
GATA binding protein 6
acts_upstream_of_or_within
ISO
(MGI:3701716|PMID:16887115)
RGD
PMID:16887115
MGI:3701716
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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Gdf11
growth differentiation factor 11
acts_upstream_of_or_within
ISO
MGI:2449672 (MGI:3512831|PMID:15548585)
RGD
PMID:15548585
MGI:3512831
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2149672 (MGI:4355651|PMID:19619492)
RGD
PMID:19619492
MGI:4355651
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Hhex
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
MGI:2177762 (MGI:3703395|PMID:16364283)
RGD
PMID:16364283
MGI:3703395
NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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Hnf1b
HNF1 homeobox B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:2157527 (MGI:2155922|PMID:11773599)
RGD
PMID:11773599
MGI:2155922
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1934258|MGI:98297 (MGI:1858523|PMID:10821773), (MGI:1926239|PMID:11044404)
RGD
PMID:10821773 PMID:11044404
MGI:1858523 MGI:1926239
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Ildr2
immunoglobulin-like domain containing receptor 2
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3820395 (MGI:3804573|PMID:18654634) PMID:21873635
RGD
PMID:18654634 PMID:21873635
MGI:3804573 , RGD:13792537
NCBI chr13:78,518,770...78,580,627
Ensembl chr13:78,518,802...78,576,924
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Invs
inversin
acts_upstream_of_or_within
ISO
MGI:1856915 (MGI:1289927|PMID:9771707)
RGD
PMID:9771707
MGI:1289927
NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350
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Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182246 (MGI:85032|PMID:9000074)
RGD
PMID:9000074
MGI:85032
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
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Meis2
Meis homeobox 2
IEP
RGD
PMID:15660282
RGD:2304272
NCBI chr 3:102,742,905...102,944,833
Ensembl chr 3:102,742,900...102,949,696
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Met
MET proto-oncogene, receptor tyrosine kinase
involved_in
IEP IBA
PMID:21873635
RGD GO_Central
PMID:8954115 PMID:21873635
RGD:2317563 , RGD:13792537
NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
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Mnx1
motor neuron and pancreas homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182358 (MGI:1344214|PMID:10471501)
RGD
PMID:10471501
MGI:1344214
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
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Msln
mesothelin
IEP
RGD
PMID:18505465
RGD:2326046
NCBI chr10:14,771,946...14,781,382
Ensembl chr10:14,771,961...14,777,643
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Nkx3-2
NK3 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1931319 (MGI:3056270|PMID:15329346)
RGD
PMID:15329346
MGI:3056270
NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
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Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:1891408|MGI:2179340 (MGI:3710726|PMID:17400205)
RGD
PMID:17400205
MGI:3710726
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
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Onecut2
one cut homeobox 2
acts_upstream_of_or_within
ISO
MGI:1196423 (MGI:3710726|PMID:17400205)
RGD
PMID:17400205
MGI:3710726
NCBI chr18:57,831,647...57,881,287
Ensembl chr18:57,832,111...57,879,629
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Pax2
paired box 2
involved_in
ISO
(MGI:48612|PMID:1723950)
RGD
PMID:1723950
MGI:48612
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
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Pcsk1
proprotein convertase subtilisin/kexin type 1
IEP
RGD
PMID:17221210
RGD:2308896
NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434
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Pdx1
pancreatic and duodenal homeobox 1
acts_upstream_of_or_within
IEP ISO
MGI:2152755|MGI:2181362 (MGI:3612374|PMID:16418487), (MGI:80614|PMID:8625829)
RGD
PMID:8625829 PMID:16418487 PMID:18778483
MGI:3612374 MGI:80614 , RGD:2311165
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
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Pnliprp1
pancreatic lipase-related protein 1
IEP
RGD
PMID:8203536
RGD:728275
NCBI chr 1:257,867,885...257,883,514
Ensembl chr 1:257,867,885...257,883,514
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Prox1
prospero homeobox 1
involved_in
ISO
(PMID:11789987)
RGD
PMID:11789987
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Ptf1a
pancreas associated transcription factor 1a
acts_upstream_of_or_within involved_in
ISO
MGI:2387804|MGI:3771319 (MGI:3759692|PMID:17938243) (PMID:15543146)
RGD
PMID:15543146 PMID:17938243
MGI:3759692
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
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Rbm4
RNA binding motif protein 4
acts_upstream_of_or_within
ISO
MGI:5467987|MGI:5467988 (MGI:5466631|PMID:23129807)
RGD
PMID:23129807
MGI:5466631
NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
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Selenot
selenoprotein T
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:5544732 (MGI:5525944|PMID:23913443)
UniProt Ensembl RGD
PMID:23913443
GO_REF:0000024 GO_REF:0000107 MGI:5525944
NCBI chr 2:142,804,387...142,821,438
Ensembl chr 2:142,804,405...142,821,427
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934261|MGI:96533 (MGI:1858523|PMID:10821773), (MGI:1926239|PMID:11044404)
Ensembl RGD
PMID:10821773 PMID:11044404
GO_REF:0000107 MGI:1858523 MGI:1926239
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Smad2
SMAD family member 2
acts_upstream_of_or_within
ISO
MGI:87912 (MGI:3758991|PMID:17849440)
RGD
PMID:17849440
MGI:3758991
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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Tgfb2
transforming growth factor, beta 2
IEP
RGD
PMID:16479313
RGD:2302093
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Wfs1
wolframin ER transmembrane glycoprotein
IEP
RGD
PMID:19916172
RGD:8694406
NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602
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Prox1
prospero homeobox 1
acts_upstream_of_or_within
ISO
MGI:3609548 (MGI:5317511|PMID:22178591)
RGD
PMID:22178591
MGI:5317511
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Ccdc39
coiled-coil domain containing 39
involved_in
ISO
(PMID:22693285)
RGD
PMID:22693285
NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
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Ccdc40
coiled-coil domain containing 40
involved_in
ISO
(PMID:22693285)
RGD
PMID:22693285
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
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Dnaaf1
dynein, axonemal, assembly factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19944405)
Ensembl RGD
PMID:19944405
GO_REF:0000107
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
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Nphp3
nephrocystin 3
involved_in
ISO
(PMID:20007846)
RGD
PMID:20007846
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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Zic3
Zic family member 3
involved_in
ISO
(PMID:9354794)
RGD
PMID:9354794
NCBI chr X:136,123,662...136,134,295
Ensembl chr X:136,124,026...136,134,746
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Anxa1
annexin A1
involved_in
IEP IBA
PMID:21873635
RGD GO_Central
PMID:7527053 PMID:21873635
RGD:2306957 , RGD:13792537
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
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Bak1
BCL2-antagonist/killer 1
IEP
RGD
PMID:11000281
RGD:2315710
NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
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Clu
clusterin
IMP
RGD
PMID:16411126
RGD:1582421
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:12086964)
UniProt RGD
PMID:12086964
GO_REF:0000024
NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
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Foxa2
forkhead box A2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2177337|MGI:2664968 (MGI:3530180|PMID:15680365) (PMID:12124776) GO_REF:0000107
RGD Ensembl
PMID:12124776 PMID:15680365
GO_REF:0000107 MGI:3530180
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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Gip
gastric inhibitory polypeptide
acts_upstream_of_or_within
ISO
(MGI:4940930|PMID:21270265)
RGD
PMID:21270265
MGI:4940930
NCBI chr10:80,968,410...80,976,506
Ensembl chr10:80,968,352...80,976,503
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Gipr
gastric inhibitory polypeptide receptor
acts_upstream_of_or_within
ISO
(MGI:4940930|PMID:21270265)
RGD
PMID:21270265
MGI:4940930
NCBI chr 1:78,804,287...78,814,462
Ensembl chr 1:78,805,593...78,814,462
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Hnf1b
HNF1 homeobox B
involved_in
ISS ISO
PMID:1677179 (PMID:16801329)
RGD
PMID:16801329 PMID:1677179
RGD:8554679
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Il6
interleukin 6
involved_in
ISO
(MGI:3807360|PMID:18719127)
RGD
PMID:18719127
MGI:3807360
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Il6r
interleukin 6 receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:18719127)
Ensembl RGD
PMID:18719127
GO_REF:0000107
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
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Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within
ISO
(MGI:3619850|PMID:16511571)
RGD
PMID:16511571
MGI:3619850
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Mnx1
motor neuron and pancreas homeobox 1
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2182358 (MGI:1344214|PMID:10471501) PMID:21873635
RGD
PMID:10471501 PMID:21873635
MGI:1344214 , RGD:13792537
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
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Myt1
myelin transcription factor 1
acts_upstream_of_or_within
ISO
(MGI:3763794|PMID:17928203)
RGD
PMID:17928203
MGI:3763794
NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
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Neurod1
neuronal differentiation 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:1096974|PMID:9308961), (MGI:1352314|PMID:10639171)
UniProt RGD
PMID:9308961 PMID:10639171
GO_REF:0000024 MGI:1096974 MGI:1352314
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (MGI:1270972|PMID:9584121)
RGD
PMID:9584121
MGI:1270972
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738|MGI:2386119 (MGI:3579924|PMID:15944193)
RGD
PMID:15944193
MGI:3579924
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
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Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (MGI:3579924|PMID:15944193)
RGD
PMID:15944193
MGI:3579924
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:1891408 (MGI:3710726|PMID:17400205)
RGD
PMID:17400205
MGI:3710726
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Onecut2
one cut homeobox 2
acts_upstream_of_or_within
ISO
MGI:1196423 (MGI:3710726|PMID:17400205)
RGD
PMID:17400205
MGI:3710726
NCBI chr18:57,831,647...57,881,287
Ensembl chr18:57,832,111...57,879,629
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Pde3b
phosphodiesterase 3B
acts_upstream_of_or_within
ISO
(MGI:3040550|PMID:14736883)
RGD
PMID:14736883
MGI:3040550
NCBI chr 1:168,606,762...168,770,078
Ensembl chr 1:168,607,022...168,769,334
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Pdx1
pancreatic and duodenal homeobox 1
acts_upstream_of_or_within
ISO
MGI:2181360 (MGI:3771560|PMID:18155690)
RGD
PMID:18155690
MGI:3771560
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
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Rfx3
regulatory factor X3
involved_in
ISO
(MGI:3713191|PMID:17229940)
RGD
PMID:17229940
MGI:3713191
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
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Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
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Sox4
SRY-box transcription factor 4
acts_upstream_of_or_within
ISO
MGI:2182092 (MGI:3611650|PMID:16306355)
RGD
PMID:16306355
MGI:3611650
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385469 (MGI:3815251|PMID:18723011)
RGD
PMID:18723011
MGI:3815251
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Zfp800
zinc finger protein 800
acts_upstream_of_or_within
ISO
MGI:6716236 (MGI:6716121|PMID:33653874)
RGD
PMID:33653874
MGI:6716121
NCBI chr 4:56,798,326...56,849,766
Ensembl chr 4:56,826,997...56,849,791
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Cela1
chymotrypsin like elastase 1
acts_upstream_of_or_within
ISO
MGI:2148594 (MGI:3703452|PMID:17222338)
RGD
PMID:17222338
MGI:3703452
NCBI chr 7:131,773,161...131,786,300
Ensembl chr 7:131,742,002...131,786,285
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Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485 (MGI:2387729|PMID:12101187)
RGD
PMID:12101187
MGI:2387729
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
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Igf1r
insulin-like growth factor 1 receptor
acts_upstream_of_or_within
ISO
MGI:1926486 (MGI:2387729|PMID:12101187)
RGD
PMID:12101187
MGI:2387729
NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
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Igf2
insulin-like growth factor 2
acts_upstream_of_or_within
ISO
MGI:2677156 (MGI:2387729|PMID:12101187)
RGD
PMID:12101187
MGI:2387729
NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
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Insr
insulin receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857204 (MGI:2387729|PMID:12101187)
Ensembl RGD
PMID:12101187
GO_REF:0000107 MGI:2387729
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
G
Pdx1
pancreatic and duodenal homeobox 1
acts_upstream_of_or_within
ISO
MGI:2388676 (MGI:3610256|PMID:16126192)
RGD
PMID:16126192
MGI:3610256
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
G
Ptf1a
pancreas associated transcription factor 1a
involved_in
IDA
PMID:10768861
UniProt
PMID:10768861
RGD:8554373
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
G
Srp54a
signal recognition particle 54A
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 6:72,587,582...72,645,154
Ensembl chr 6:72,587,605...72,625,189
G
Wls
Wnt ligand secretion mediator
involved_in
ISO
(MGI:4834980|PMID:20614471)
RGD
PMID:20614471
MGI:4834980
NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
G
Xbp1
X-box binding protein 1
acts_upstream_of_or_within
ISO
MGI:2386788 (MGI:3768452|PMID:16362047)
RGD
PMID:16362047
MGI:3768452
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2149672 (MGI:1351379|PMID:10615124) GO_REF:0000107
RGD Ensembl
PMID:10615124
GO_REF:0000107 MGI:1351379
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(MGI:5437569|PMID:22764048)
RGD
PMID:22764048
MGI:5437569
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
G
Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:23178930
RGD:11567224
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
G
Cela1
chymotrypsin like elastase 1
acts_upstream_of_or_within
ISO
MGI:2148594 (MGI:3703452|PMID:17222338)
RGD
PMID:17222338
MGI:3703452
NCBI chr 7:131,773,161...131,786,300
Ensembl chr 7:131,742,002...131,786,285
G
Nr5a2
nuclear receptor subfamily 5, group A, member 2
acts_upstream_of_or_within
ISO
(MGI:5588050|PMID:25063451)
RGD
PMID:25063451
MGI:5588050
NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176256|MGI:2684317 (MGI:4833770|PMID:20185815)
Ensembl RGD
PMID:20185815
GO_REF:0000107 MGI:4833770
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
G
Pax6
paired box 6
involved_in
IEA IMP ISO
GO_REF:0000107 PMID:20592023 (MGI:4943812|PMID:20592023) (PMID:20592023)
Ensembl RGD
PMID:20592023 PMID:20592023
GO_REF:0000107 MGI:4943812 , RGD:8552352
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3701716|PMID:16887115)
Ensembl RGD
PMID:16887115
GO_REF:0000107 MGI:3701716
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2149672 (MGI:1351379|PMID:10615124)
Ensembl RGD
PMID:10615124
GO_REF:0000107 MGI:1351379
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Insm1
INSM transcriptional repressor 1
involved_in acts_upstream_of_or_within
ISO
(MGI:3619850|PMID:16511571)
RGD
PMID:16511571
MGI:3619850
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738 (MGI:3579924|PMID:15944193)
RGD
PMID:15944193
MGI:3579924
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (MGI:3579924|PMID:15944193)
RGD
PMID:15944193
MGI:3579924
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:2179340 (MGI:1859126|PMID:10825208)
RGD
PMID:10825208
MGI:1859126
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Pax6
paired box 6
IMP
RGD
PMID:20592023
RGD:8552352
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(MGI:4422104|PMID:20148032)
RGD
PMID:20148032
MGI:4422104
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293)
RGD
PMID:25186293
MGI:5618205
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (MGI:3768695|PMID:17988662)
RGD
PMID:17988662
MGI:3768695
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708|MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662)
RGD
PMID:17202186 PMID:17988662
MGI:3703458 MGI:3768695
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:2179340 (MGI:1859126|PMID:10825208)
RGD
PMID:10825208
MGI:1859126
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(MGI:4422104|PMID:20148032)
RGD
PMID:20148032
MGI:4422104
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(MGI:4422104|PMID:20148032)
RGD
PMID:20148032
MGI:4422104
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (MGI:3768695|PMID:17988662)
RGD
PMID:17988662
MGI:3768695
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708 (MGI:3768695|PMID:17988662)
RGD
PMID:17988662
MGI:3768695
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Bad
BCL2-associated agonist of cell death
involved_in
ISO ISS
(MGI:3778846|PMID:18223655) GO_REF:0000024
RGD UniProt
PMID:18223655
GO_REF:0000024 MGI:3778846
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
G
Rfx3
regulatory factor X3
involved_in
ISO
(MGI:4941444|PMID:20413507)
RGD
PMID:20413507
MGI:4941444
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
G
Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4819446|PMID:20562852)
UniProt RGD
PMID:20562852
GO_REF:0000024 MGI:4819446
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Clock
clock circadian regulator
involved_in
ISO IEA ISS
(MGI:4819446|PMID:20562852) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20562852
GO_REF:0000024 GO_REF:0000107 MGI:4819446
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
G
Rheb
Ras homolog, mTORC1 binding
involved_in
ISO
(PMID:19258434)
RGD
PMID:19258434
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO ISS IEA
(PMID:11865031) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:11865031
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO
(PMID:11865031)
RGD
PMID:11865031
NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO
(PMID:11865031)
RGD
PMID:11865031
NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
G
Cdh2
cadherin 2
involved_in
ISO ISS IEA
(MGI:6216737|PMID:26750727) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:26750727
GO_REF:0000024 GO_REF:0000107 MGI:6216737
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:20668294)
RGD
PMID:20668294
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISO ISS IEA
(MGI:5426345|PMID:22529374) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:22529374
GO_REF:0000024 GO_REF:0000107 MGI:5426345
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within
ISO
MGI:3656035 (MGI:3655758|PMID:16951258)
RGD
PMID:16951258
MGI:3655758
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Mir214
microRNA 214
acts_upstream_of_or_within
ISO
(MGI:3775688|PMID:17804764)
RGD
PMID:17804764
MGI:3775688
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
G
Mir375
microRNA 375
acts_upstream_of_or_within
ISO
(MGI:3775688|PMID:17804764)
RGD
PMID:17804764
MGI:3775688
NCBI chr 9:76,457,911...76,457,985
Ensembl chr 9:76,457,911...76,457,985
G
Mir503
microRNA 503
acts_upstream_of_or_within
ISO
(MGI:3775688|PMID:17804764)
RGD
PMID:17804764
MGI:3775688
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
G
Mir541
microRNA 541
acts_upstream_of_or_within
ISO
(MGI:3775688|PMID:17804764)
RGD
PMID:17804764
MGI:3775688
NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3761395|PMID:17456846)
RGD
PMID:17202186 PMID:17456846
MGI:3703458 MGI:3761395
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx6-1
NK6 homeobox 1
IEP
RGD
PMID:9603781
RGD:2326025
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Pdpk1
3-phosphoinositide dependent protein kinase-1
involved_in
ISO
(MGI:4365695|PMID:19635472)
RGD
PMID:19635472
MGI:4365695
NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
G
Sidt2
SID1 transmembrane family, member 2
acts_upstream_of_or_within
ISO
MGI:5532825 (MGI:5529865|PMID:23776622)
RGD
PMID:23776622
MGI:5529865
NCBI chr 8:46,232,379...46,248,913
Ensembl chr 8:46,232,383...46,248,700
G
Smo
smoothened, frizzled class receptor
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2176256|MGI:2684317 (MGI:4833770|PMID:20185815) GO_REF:0000107
RGD Ensembl
PMID:20185815
GO_REF:0000107 MGI:4833770
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO
MGI:1857617 (MGI:3663526|PMID:16246260)
RGD
PMID:16246260
MGI:3663526
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3701716|PMID:16887115)
Ensembl RGD
PMID:16887115
GO_REF:0000107 MGI:3701716
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Insm1
INSM transcriptional repressor 1
involved_in acts_upstream_of_or_within
ISO
(MGI:3619850|PMID:16511571)
RGD
PMID:16511571
MGI:3619850
NCBI chr 3:133,639,790...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Men1
menin 1
IMP
RGD
PMID:24157940
RGD:9589069
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(MGI:5437569|PMID:22764048)
RGD
PMID:22764048
MGI:5437569
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of
ISO
MGI:1932100 (MGI:2686854|PMID:14729487)
RGD
PMID:14729487
MGI:2686854
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386119 (MGI:3579924|PMID:15944193)
RGD
PMID:15944193
MGI:3579924
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:2179340 (MGI:1859126|PMID:10825208)
RGD
PMID:10825208
MGI:1859126
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Pax4
paired box 4
acts_upstream_of
ISO
MGI:2182122 (MGI:2686854|PMID:14729487)
RGD
PMID:14729487
MGI:2686854
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
G
Pax6
paired box 6
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:1934347 (MGI:5437569|PMID:22764048) GO_REF:0000107
RGD Ensembl
PMID:22764048 PMID:22403172
GO_REF:0000107 MGI:5437569 , RGD:8552355
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pdx1
pancreatic and duodenal homeobox 1
involved_in acts_upstream_of_or_within
ISO IBA IMP
(PMID:12124776), (PMID:24567802) PMID:21873635 MGI:2181362 (MGI:3612374|PMID:16418487) PMID:21108535
RGD
PMID:12124776 PMID:16418487 PMID:24567802 PMID:21873635 PMID:21108535
MGI:3612374 , RGD:13792537 , RGD:8553608
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
G
Reg1a
regenerating family member 1 alpha
involved_in
ISO
MGI:2446480 (MGI:3615755|PMID:16405968)
RGD
PMID:16405968
MGI:3615755
NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(MGI:4422104|PMID:20148032)
RGD
PMID:20148032
MGI:4422104
NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293)
RGD
PMID:25186293
MGI:5618205
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Zbed6
zinc finger, BED-type containing 6
involved_in
ISO
(MGI:5511070|PMID:24043816)
RGD
PMID:24043816
MGI:5511070
NCBI chr13:45,107,489...45,113,141
Ensembl chr13:45,071,718...45,114,009
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662)
RGD
PMID:17202186 PMID:17988662
MGI:3703458 MGI:3768695
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Bhlha15
basic helix-loop-helix family, member a15
acts_upstream_of_or_within
ISO
MGI:2182768 (MGI:3611530|PMID:16423820)
RGD
PMID:16423820
MGI:3611530
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
G
Gdf11
growth differentiation factor 11
acts_upstream_of_or_within
ISO
MGI:2449672 (MGI:3512831|PMID:15548585)
RGD
PMID:15548585
MGI:3512831
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
G
Rfx3
regulatory factor X3
involved_in
ISO
(MGI:4941444|PMID:20413507)
RGD
PMID:20413507
MGI:4941444
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all