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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular matrix
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Accession:GO:0031012 term browser browse the term
Definition:A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues.
Synonyms:exact_synonym: proteinaceous extracellular matrix
 narrow_synonym: matrisome
 alt_id: GO:0005578
 xref: NIF_Subcellular:nlx_subcell_20090513;   Wikipedia:Extracellular_matrix


show annotations for term's descendants           Sort by:
extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chr33:7,265,804...7,498,973
Ensembl chr33:7,266,685...7,418,106 		JBrowse link
G ACAN aggrecan located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 located_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr31:22,169,821...22,178,879
Ensembl chr31:22,170,381...22,178,945 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,279,983...2,504,630
Ensembl chr11:2,280,108...2,502,635 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:26,589,529...26,749,422
Ensembl chr20:26,588,654...26,748,604 		JBrowse link
G ADAMTSL2 ADAMTS like 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,925,738...49,958,870
Ensembl chr 9:49,925,755...49,958,300 		JBrowse link
G ADAMTSL4 ADAMTS like 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:59,736,628...59,747,689
Ensembl chr17:59,736,534...59,746,980 		JBrowse link
G ALPL alkaline phosphatase, biomineralization associated located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,559,791...77,614,102
Ensembl chr 2:77,559,791...77,614,820 		JBrowse link
G AMTN amelotin located_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,855,278...59,867,133
Ensembl chr13:59,852,490...59,867,516 		JBrowse link
G APOE apolipoprotein E located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440 		JBrowse link
G ASPN asporin located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,881,610...98,905,641
Ensembl chr 1:98,881,690...98,904,945 		JBrowse link
G BCAN brevican located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G BGN biglycan located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,330,371...121,334,634
Ensembl chr  X:121,330,259...121,334,634 		JBrowse link
G CCBE1 collagen and calcium binding EGF domains 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,597,389...16,819,888
Ensembl chr 1:16,597,334...16,819,894 		JBrowse link
G CCDC80 coiled-coil domain containing 80 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:17,105,086...17,141,380
Ensembl chr33:17,105,086...17,139,896 		JBrowse link
G COCH cochlin located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:10,215,101...10,230,017
Ensembl chr 8:10,214,536...10,233,550 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
G COL17A1 collagen type XVII alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:16,349,926...16,402,213
Ensembl chr28:16,350,564...16,402,056 		JBrowse link
G COL1A1 collagen type I alpha 1 chain is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927 		JBrowse link
G COL1A2 collagen type I alpha 2 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:19,883,731...19,919,527
Ensembl chr14:19,883,868...19,919,527 		JBrowse link
G COL26A1 collagen type XXVI alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,348,223...8,502,309
Ensembl chr 6:8,380,486...8,502,083 		JBrowse link
G COL2A1 collagen type II alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G COL5A1 collagen type V alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,706,852...50,856,691
Ensembl chr 9:50,770,277...50,854,728 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr31:39,301,718...39,319,895
Ensembl chr31:39,301,748...39,448,062 		JBrowse link
G COL6A2 collagen type VI alpha 2 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr31:39,433,174...39,448,051 JBrowse link
G COL6A3 collagen type VI alpha 3 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr25:47,971,439...48,052,673
Ensembl chr25:47,971,315...48,052,402 		JBrowse link
G COL6A6 collagen type VI alpha 6 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr23:27,759,707...27,900,971
Ensembl chr23:27,759,103...27,900,154 		JBrowse link
G CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:67,643,225...67,707,438
Ensembl chr 5:67,645,179...67,692,122 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,022,900...11,053,900
Ensembl chr32:11,045,508...11,053,252 		JBrowse link
G ECM2 extracellular matrix protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,832,107...98,865,084
Ensembl chr 1:98,832,677...98,864,700 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107 		JBrowse link
G EGFL6 EGF like domain multiple 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:9,944,648...10,062,699
Ensembl chr  X:9,995,846...10,062,266 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,391,657...70,574,629
Ensembl chr 4:70,392,330...70,575,225 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,071,502...21,078,888
Ensembl chr17:21,071,580...21,078,889 		JBrowse link
G EPYC epiphycan located_in IEA Ensembl GO_REF:0000107 NCBI chr15:31,670,926...31,708,667
Ensembl chr15:31,671,182...31,708,674 		JBrowse link
G F3 coagulation factor III, tissue factor located_in ISS UniProt GO_REF:0000024 NCBI chr 6:54,709,581...54,720,603
Ensembl chr 6:54,708,471...54,720,607 		JBrowse link
G FBLN1 fibulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:20,498,097...20,564,776
Ensembl chr10:20,498,567...20,627,836 		JBrowse link
G FBLN7 fibulin 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,525,866...36,574,671
Ensembl chr17:36,525,756...36,571,523 		JBrowse link
G FBN1 fibrillin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FGF1 fibroblast growth factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:37,467,431...37,554,770
Ensembl chr 2:37,470,985...37,554,619 		JBrowse link
G FN1 fibronectin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123 		JBrowse link
G GFOD2 glucose-fructose oxidoreductase domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:81,738,653...81,776,853
Ensembl chr 5:81,766,864...81,776,206 		JBrowse link
G GLG1 golgi glycoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,020,743...76,171,477
Ensembl chr 5:76,020,084...76,167,007 		JBrowse link
G GPC1 glypican 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:50,484,554...50,492,940
Ensembl chr25:50,482,071...50,515,877 		JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:23,999,148...24,077,935
Ensembl chr 3:23,998,545...24,074,580 		JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,340,493...41,346,607
Ensembl chr 7:41,341,883...41,344,117 		JBrowse link
G HPSE2 heparanase 2 (inactive) located_in IEA Ensembl GO_REF:0000107 NCBI chr28:11,584,440...12,215,732
Ensembl chr28:11,585,807...12,215,614 		JBrowse link
G IHH Indian hedgehog signaling molecule located_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,741,085...13,745,426
Ensembl chr28:13,742,322...13,745,119 		JBrowse link
G LAMA1 laminin subunit alpha 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LOX lysyl oxidase located_in IEA Ensembl GO_REF:0000107 NCBI chr11:12,023,645...12,040,015
Ensembl chr11:12,027,250...12,039,819 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:26,129,528...26,521,782
Ensembl chr17:26,130,781...26,521,779 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,124,109...113,152,283
Ensembl chr 1:113,124,109...113,150,442 		JBrowse link
G LUM lumican located_in IEA Ensembl GO_REF:0000107 NCBI chr15:31,792,872...31,800,444
Ensembl chr15:31,793,233...31,800,912 		JBrowse link
G MATN1 matrilin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:70,225,642...70,234,972 JBrowse link
G MATN3 matrilin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,037,175...15,054,451
Ensembl chr17:15,037,995...15,054,436 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:11,212,531...11,222,805
Ensembl chr32:11,212,531...11,222,805 		JBrowse link
G MFAP5 microfibril associated protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:37,028,518...37,042,657
Ensembl chr27:37,028,037...37,040,592 		JBrowse link
G MGP matrix Gla protein located_in IEA InterPro GO_REF:0000002 NCBI chr27:31,735,301...31,738,673
Ensembl chr27:31,734,660...31,738,673 		JBrowse link
G MMP1 matrix metallopeptidase 1 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648 		JBrowse link
G MMP11 matrix metallopeptidase 11 located_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr26:28,730,173...28,741,506
Ensembl chr26:28,727,332...28,741,415 		JBrowse link
G MMP12 matrix metallopeptidase 12 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:28,918,626...28,933,404
Ensembl chr 5:28,918,594...28,933,309 		JBrowse link
G MMP13 matrix metallopeptidase 13 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:28,793,568...28,864,832
Ensembl chr 5:28,850,522...28,864,121 		JBrowse link
G MMP14 matrix metallopeptidase 14 located_in IEA InterPro GO_REF:0000002 NCBI chr 8:3,183,419...3,193,079
Ensembl chr 8:3,183,606...3,194,122 		JBrowse link
G MMP15 matrix metallopeptidase 15 located_in IEA InterPro GO_REF:0000002 NCBI chr 2:58,501,783...58,512,507
Ensembl chr 2:58,504,848...58,512,371 		JBrowse link
G MMP16 matrix metallopeptidase 16 located_in IEA InterPro GO_REF:0000002 NCBI chr29:33,896,133...34,207,560
Ensembl chr29:33,917,907...34,207,466 		JBrowse link
G MMP17 matrix metallopeptidase 17 located_in IEA InterPro GO_REF:0000002 NCBI chr26:1,008,651...1,019,131
Ensembl chr26:1,009,109...1,018,662 		JBrowse link
G MMP19 matrix metallopeptidase 19 located_in IEA InterPro GO_REF:0000002 NCBI chr10:219,193...224,873
Ensembl chr10:219,618...224,778 		JBrowse link
G MMP2 matrix metallopeptidase 2 located_in IEA InterPro GO_REF:0000002 NCBI chr 2:60,471,092...60,492,991
Ensembl chr 2:60,471,257...60,494,113 		JBrowse link
G MMP20 matrix metallopeptidase 20 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:29,106,717...29,154,628
Ensembl chr 5:29,106,717...29,155,071 		JBrowse link
G MMP21 matrix metallopeptidase 21 located_in IEA InterPro GO_REF:0000002 NCBI chr28:34,936,976...34,944,110
Ensembl chr28:34,935,186...34,944,316 		JBrowse link
G MMP23 matrix metallopeptidase 23 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:56,693,751...56,697,284
Ensembl chr 5:56,694,966...56,697,284 		JBrowse link
G MMP24 matrix metallopeptidase 24 located_in IEA InterPro GO_REF:0000002 NCBI chr24:24,223,049...24,258,082
Ensembl chr24:24,232,833...24,255,725 		JBrowse link
G MMP25 matrix metallopeptidase 25 located_in IEA InterPro GO_REF:0000002 NCBI chr 6:38,128,585...38,139,882
Ensembl chr 6:38,130,092...38,140,007 		JBrowse link
G MMP26 matrix metallopeptidase 26 located_in IEA InterPro GO_REF:0000002 NCBI chr21:27,416,768...27,429,374
Ensembl chr21:27,423,965...27,428,624 		JBrowse link
G MMP27 matrix metallopeptidase 27 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:29,051,205...29,064,364
Ensembl chr 5:29,051,000...29,064,702 		JBrowse link
G MMP28 matrix metallopeptidase 28 located_in IEA InterPro GO_REF:0000002 NCBI chr 9:37,873,364...37,907,724
Ensembl chr 9:37,884,430...37,907,719 		JBrowse link
G MMP3 matrix metallopeptidase 3 (stromelysin 1, progelatinase) located_in IEA InterPro GO_REF:0000002 NCBI chr 5:28,949,631...28,957,915
Ensembl chr 5:28,949,631...28,958,222 		JBrowse link
G MMP7 matrix metallopeptidase 7 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:29,187,902...29,196,157
Ensembl chr 5:29,187,851...29,196,153 		JBrowse link
G MMP8 matrix metallopeptidase 8 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:29,036,381...29,047,180
Ensembl chr 5:29,035,820...29,046,808 		JBrowse link
G MMP9 matrix metallopeptidase 9 located_in IEA InterPro GO_REF:0000002 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293 		JBrowse link
G NAV2 neuron navigator 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813 		JBrowse link
G NDNF neuron derived neurotrophic factor located_in IEA Ensembl GO_REF:0000107 NCBI chr19:19,009,966...19,053,047
Ensembl chr19:19,036,372...19,049,937 		JBrowse link
G NEPN nephrocan located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:57,837,927...57,859,346 JBrowse link
G NID1 nidogen 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:3,935,218...4,018,133
Ensembl chr 4:3,935,223...4,017,300 		JBrowse link
G NPNT nephronectin located_in IEA Ensembl GO_REF:0000107 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275 		JBrowse link
G OLFML2A olfactomedin like 2A located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:58,190,984...58,221,623
Ensembl chr 9:58,193,765...58,221,546 		JBrowse link
G OLFML2B olfactomedin like 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr38:20,651,107...20,693,625
Ensembl chr38:20,658,158...20,693,250 		JBrowse link
G OMD osteomodulin located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,923,507...98,933,751
Ensembl chr 1:98,929,274...98,931,219 		JBrowse link
G OPTC opticin located_in
is_active_in		 ISS
IBA
IEA		 (PMID:21873635) UniProt
GO_Central
Ensembl		 PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr38:215,404...223,247
Ensembl chr38:215,404...223,247 		JBrowse link
G OTOG otogelin located_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,103,163...40,193,680
Ensembl chr21:40,106,826...40,192,475 		JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,385,313...25,392,278
Ensembl chr 9:25,385,396...25,392,242 		JBrowse link
G POSTN periostin located_in IEA Ensembl GO_REF:0000107 NCBI chr25:3,167,319...3,208,970
Ensembl chr25:3,167,359...3,208,411 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G PXDN peroxidasin located_in IEA Ensembl GO_REF:0000107 NCBI chr17:834,625...891,551
Ensembl chr17:836,434...875,117 		JBrowse link
G RELL2 RELT like 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,598,175...36,602,607
Ensembl chr 2:36,599,149...36,602,020 		JBrowse link
G RELN reelin located_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SEBOX SEBOX homeobox located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,614,770...42,616,412
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G SERAC1 serine active site containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:47,599,802...47,651,034
Ensembl chr 1:47,578,472...47,669,494 		JBrowse link
G SHH sonic hedgehog signaling molecule located_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SNED1 sushi, nidogen and EGF like domains 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:51,057,358...51,139,808
Ensembl chr25:51,057,376...51,135,412 		JBrowse link
G TECTA tectorin alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:12,879,963...12,949,211
Ensembl chr 5:12,879,951...12,949,147 		JBrowse link
G TFIP11 tuftelin interacting protein 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr26:20,177,896...20,192,466
Ensembl chr26:20,177,904...20,192,469 		JBrowse link
G TGFB1 transforming growth factor beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TGFBI transforming growth factor beta induced located_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,932,038...23,971,983
Ensembl chr11:23,938,453...23,971,607 		JBrowse link
G TGM2 transglutaminase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:26,631,339...26,662,723
Ensembl chr24:26,628,009...26,663,840 		JBrowse link
G THBS1 thrombospondin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:6,770,212...6,786,875
Ensembl chr30:6,769,470...6,784,915 		JBrowse link
G THBS2 thrombospondin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,402,519...56,429,975
Ensembl chr 1:56,402,524...56,451,892 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,156,926...35,358,673
Ensembl chr30:35,156,981...35,353,767 		JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr  X:41,201,623...41,205,314
Ensembl chr  X:41,201,638...41,205,310 		JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:2,521,882...2,533,883
Ensembl chr 9:2,521,882...2,533,989 		JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:6,399,522...6,405,089
Ensembl chr20:6,399,522...6,405,089 		JBrowse link
G TNFRSF11B TNF receptor superfamily member 11b located_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,155,765...18,183,263
Ensembl chr13:18,156,367...18,183,444 		JBrowse link
G TNN tenascin N located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,246,481...24,342,686
Ensembl chr 7:24,230,930...24,308,520 		JBrowse link
G TNR tenascin R located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
G UCMA upper zone of growth plate and cartilage matrix associated located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:23,287,410...23,307,116
Ensembl chr 2:23,287,551...23,298,035 		JBrowse link
G VIT vitrin located_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,142,924...29,259,800
Ensembl chr17:29,143,069...29,243,406 		JBrowse link
G VTN vitronectin located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,617,860...42,620,825
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,578,256...56,583,552
Ensembl chr 5:56,578,297...56,582,502 		JBrowse link
G VWC2 von Willebrand factor C domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,248,612...1,350,965
Ensembl chr18:1,257,357...1,350,856 		JBrowse link
G VWF von Willebrand factor is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:38,834,812...38,972,614
Ensembl chr27:38,833,837...39,320,142 		JBrowse link
G WNT11 Wnt family member 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT3 Wnt family member 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT4 Wnt family member 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111 		JBrowse link
G WNT5A Wnt family member 5A located_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G WNT6 Wnt family member 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654 		JBrowse link
G ZP3 zona pellucida glycoprotein 3 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:7,586,212...7,594,610
Ensembl chr 6:7,585,970...7,594,610 		JBrowse link
basement membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G ACHE acetylcholinesterase located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,874,747...8,879,926
Ensembl chr 6:8,873,584...8,879,702 		JBrowse link
G ACTA2 actin alpha 2, smooth muscle ISO MMO:0000538 RGD PMID:30476341 RGD:151893502 NCBI chr26:38,700,434...38,714,915
Ensembl chr26:38,700,480...38,711,753 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr31:22,169,821...22,178,879
Ensembl chr31:22,170,381...22,178,945 		JBrowse link
G AGRN agrin located_in ISO
IEA		 RGD
Ensembl		 PMID:11470186 PMID:15711988 GO_REF:0000107 RGD:11556219 RGD:1578369 RGD:11556219 RGD:150520179 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745 		JBrowse link
G ALB albumin ISO RGD PMID:1723977 RGD:1625719 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709 		JBrowse link
G AMELX amelogenin X-linked located_in ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chr  X:7,822,513...7,828,692
Ensembl chr  X:7,822,859...7,830,351 		JBrowse link
G AMTN amelotin located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr13:59,855,278...59,867,133
Ensembl chr13:59,852,490...59,867,516 		JBrowse link
G ANXA2 annexin A2 located_in IEA UniProt
UniProt		 GO_REF:0000043 GO_REF:0000044 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281 		JBrowse link
G ATRN attractin is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:17,698,238...17,859,810
Ensembl chr24:17,702,282...17,859,737 		JBrowse link
G ATRNL1 attractin like 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:25,816,404...26,603,302
Ensembl chr28:25,768,697...26,601,819 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase colocalizes_with
located_in
part_of		 ISO
IEA		 (PMID:18664494)
(MGI:3810856|PMID:18664494)		 BHF-UCL
Ensembl
CACAO		 PMID:18664494 GO_REF:0000107 MGI:3810856 NCBI chr  X:35,939,117...36,296,438
Ensembl chr  X:35,940,647...36,297,014 		JBrowse link
G CCDC80 coiled-coil domain containing 80 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:17,105,086...17,141,380
Ensembl chr33:17,105,086...17,139,896 		JBrowse link
G CD151 CD151 molecule part_of
located_in		 ISO
IEA		 (PMID:23302890) CACAO
Ensembl		 PMID:23302890 GO_REF:0000107 NCBI chr18:45,195,875...45,200,066
Ensembl chr18:45,196,237...45,200,081 		JBrowse link
G COL15A1 collagen type XV alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,026,209...56,131,698
Ensembl chr11:56,025,269...56,130,861 		JBrowse link
G COL17A1 collagen type XVII alpha 1 chain located_in IEA UniProt
UniProt		 GO_REF:0000043 GO_REF:0000044 NCBI chr28:16,349,926...16,402,213
Ensembl chr28:16,350,564...16,402,056 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain located_in ISO (MGI:2450496|PMID:12588956), (MGI:3054601|PMID:15254016), (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211), (MGI:76276|PMID:7568013) MGI PMID:7568013 PMID:12588956 PMID:15254016 PMID:18757743 PMID:19651211 MGI:2450496 MGI:3054601 MGI:3807344 MGI:4397493 MGI:76276 NCBI chr31:38,915,872...38,957,484 JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr14:22,991,469...23,153,333
Ensembl chr14:22,993,286...23,153,305 		JBrowse link
G COL2A1 collagen type II alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain located_in IEA
ISO		 UniProt
Ensembl
RGD		 PMID:11470186 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 RGD:11556219 RGD:11556219 RGD:150520179 NCBI chr22:58,656,579...58,820,560
Ensembl chr22:58,697,175...58,773,297 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr25:39,975,547...40,106,833
Ensembl chr25:39,975,586...40,104,782 		JBrowse link
G COL4A4 collagen type IV alpha 4 chain located_in
is_active_in		 IEA
ISS
IBA		 (PMID:21873635) UniProt
Ensembl
UniProt
GO_Central		 PMID:21873635 GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr25:39,849,680...39,976,035
Ensembl chr25:39,854,388...39,976,189 		JBrowse link
G COL4A5 collagen type IV alpha 5 chain is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
GO_Central
UniProt
Ensembl
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:81,982,119...82,248,428
Ensembl chr  X:81,982,275...82,247,679 		JBrowse link
G COL4A6 collagen type IV alpha 6 chain located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:81,690,047...81,981,005
Ensembl chr  X:81,691,417...81,980,703 		JBrowse link
G COL5A1 collagen type V alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,706,852...50,856,691
Ensembl chr 9:50,770,277...50,854,728 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain located_in ISO (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211) MGI PMID:18757743 PMID:19651211 MGI:3807344 MGI:4397493 NCBI chr20:40,519,121...40,550,305
Ensembl chr20:40,519,378...40,552,935 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:32,763,782...32,847,456
Ensembl chr12:32,764,496...32,847,574 		JBrowse link
G COL9A3 collagen type IX alpha 3 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:46,653,400...46,669,183
Ensembl chr24:46,662,376...46,667,884 		JBrowse link
G DAG1 dystroglycan 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 ISO RGD PMID:18803302 RGD:10401659 NCBI chr10:56,632,801...56,694,872
Ensembl chr10:56,579,899...56,787,187 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in ISO (MGI:3709425|PMID:17324935) UniProt PMID:17324935 MGI:3709425 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107 		JBrowse link
G EFNA5 ephrin A5 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:4,272,138...4,546,527
Ensembl chr 3:4,272,518...4,542,049 		JBrowse link
G EGFL6 EGF like domain multiple 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:9,944,648...10,062,699
Ensembl chr  X:9,995,846...10,062,266 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 4:70,391,657...70,574,629
Ensembl chr 4:70,392,330...70,575,225 		JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 located_in ISO (MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:2178511 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939 		JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:48,589,408...48,594,852
Ensembl chr 9:48,570,891...48,594,452 		JBrowse link
G FBLN1 fibulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:20,498,097...20,564,776
Ensembl chr10:20,498,567...20,627,836 		JBrowse link
G FBN1 fibrillin 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FGF9 fibroblast growth factor 9 ISO ovarian granulosa cells and follicles; seminiferous tubules RGD PMID:17494997 RGD:2289861 NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550 		JBrowse link
G FN1 fibronectin 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:14656002 GO_REF:0000107 RGD:1578551 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr32:2,558,442...2,993,199
Ensembl chr32:2,558,354...2,991,063 		JBrowse link
G FREM1 FRAS1 related extracellular matrix 1 located_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:35,174,390...35,338,983
Ensembl chr11:35,176,934...35,310,335 		JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:2,097,264...2,264,049
Ensembl chr25:2,102,849...2,264,456 		JBrowse link
G FREM3 FRAS1 related extracellular matrix 3 located_in ISO (MGI:3697950|PMID:17251066), (MGI:3721022|PMID:17462874), (MGI:3766685|PMID:17596926) BHF-UCL PMID:17251066 PMID:17462874 PMID:17596926 MGI:3697950 MGI:3721022 MGI:3766685
G GSTO1 glutathione S-transferase omega 1 ISO RGD PMID:11311527 RGD:5490519 NCBI chr28:16,569,421...16,579,239
Ensembl chr28:16,569,066...16,619,880 		JBrowse link
G HMCN1 hemicentin 1 located_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:18,798,802...19,254,847
Ensembl chr 7:18,798,796...19,253,786 		JBrowse link
G HMCN2 hemicentin 2 located_in IEA UniProt GO_REF:0000117 NCBI chr 9:53,486,151...53,633,340
Ensembl chr 9:53,485,760...53,633,808 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 is_active_in
located_in		 IBA
IEA
ISO		 (PMID:21873635) GO_Central
UniProt
RGD
UniProt		 PMID:11470186 PMID:21873635 GO_REF:0000043 GO_REF:0000044 RGD:11556219 RGD:11556219 RGD:150520179 NCBI chr 2:77,263,534...77,366,558
Ensembl chr 2:77,301,858...77,367,724 		JBrowse link
G ITGA6 integrin subunit alpha 6 located_in ISO (MGI:1202096|PMID:9524190) MGI PMID:9524190 MGI:1202096 NCBI chr36:16,777,363...16,858,725
Ensembl chr36:16,776,863...16,855,449 		JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:9202984 PMID:18596883 RGD:1581320 RGD:2325689 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961 		JBrowse link
G ITGB4 integrin subunit beta 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,825,148...4,855,266
Ensembl chr 9:4,825,292...4,855,820 		JBrowse link
G LAMA1 laminin subunit alpha 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LAMA2 laminin subunit alpha 2 located_in ISO
IEA		 RGD
Ensembl
UniProt
UniProt		 PMID:11271373 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 RGD:1600203 NCBI chr 1:67,645,461...68,096,506
Ensembl chr 1:67,611,122...68,095,914 		JBrowse link
G LAMA3 laminin subunit alpha 3 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:64,405,719...64,654,910
Ensembl chr 7:64,406,082...64,655,268 		JBrowse link
G LAMA4 laminin subunit alpha 4 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:68,535,614...68,639,115
Ensembl chr12:68,535,860...68,678,762 		JBrowse link
G LAMA5 laminin subunit alpha 5 located_in
is_active_in		 ISO (PMID:14557481)
(MGI:1097278|PMID:9299121), (MGI:1101275|PMID:9396756), (MGI:1278097|PMID:9735344), (MGI:2150219|PMID:11507772), (MGI:2181263|PMID:12051813), (MGI:2182206|PMID:8707838), (MGI:2662649|PMID:12743034), (MGI:2670559|PMID:12921739), (MGI:2678847|PMID:14568553), (MGI:3579951|PMID:15895400), (MGI:3664526|PMID:16886065), (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211), (MGI:5427748|PMID:22665518)
(MGI:1352792|PMID:10651091)		 UniProt
MGI		 PMID:8707838 PMID:9299121 PMID:9396756 PMID:9735344 PMID:10651091 More... MGI:1097278 MGI:1101275 MGI:1278097 MGI:1352792 MGI:2150219 MGI:2181263 MGI:2182206 MGI:2662649 MGI:2670559 MGI:2678847 MGI:3579951 MGI:3664526 MGI:3807344 MGI:4397493 MGI:5427748 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LAMB1 laminin subunit beta 1 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMB2 laminin subunit beta 2 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
G LAMB3 laminin subunit beta 3 located_in ISO (MGI:1095193|PMID:9264260), (MGI:3807344|PMID:18757743), (MGI:65651|PMID:8012114) MGI PMID:8012114 PMID:9264260 PMID:18757743 MGI:1095193 MGI:3807344 MGI:65651 NCBI chr 7:8,272,326...8,313,322
Ensembl chr 7:8,272,736...8,310,474 		JBrowse link
G LAMB4 laminin subunit beta 4 located_in IEA UniProt
UniProt		 GO_REF:0000044 NCBI chr18:12,517,124...12,609,253
Ensembl chr18:12,509,774...12,608,862 		JBrowse link
G LAMC1 laminin subunit gamma 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:16,406,421...16,528,372
Ensembl chr 7:16,404,495...16,526,000 		JBrowse link
G LAMC2 laminin subunit gamma 2 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
UniProt
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 NCBI chr 7:16,543,541...16,625,304
Ensembl chr 7:16,569,086...16,624,085 		JBrowse link
G LAMC3 laminin subunit gamma 3 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 9:52,970,313...53,028,817
Ensembl chr 9:52,970,306...53,028,821 		JBrowse link
G LOC100687983 annexin A2-like located_in IEA UniProt
UniProt		 GO_REF:0000043 GO_REF:0000044 NCBI chr 1:94,255,132...94,263,097 JBrowse link
G LOC477072 serotransferrin ISO RGD PMID:1723977 RGD:1625719 NCBI chr23:30,658,250...30,683,816
Ensembl chr23:30,595,704...30,683,845 		JBrowse link
G LOC607874 cystatin-C-like ISO RGD PMID:15872057 RGD:2306505 NCBI chr23:49,562...53,618 JBrowse link
G LOXL1 lysyl oxidase like 1 ISO RGD PMID:22382377 RGD:7394733 NCBI chr30:37,191,201...37,204,163
Ensembl chr30:37,183,128...37,204,058 		JBrowse link
G LOXL2 lysyl oxidase like 2 located_in ISO PMID:21835952 UniProt PMID:21835952 RGD:8553848 NCBI chr25:34,095,858...34,186,775
Ensembl chr25:34,126,335...34,185,969 		JBrowse link
G MATN2 matrilin 2 located_in ISO (MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:3850905 NCBI chr13:149,108...296,005
Ensembl chr13:149,095...295,994 		JBrowse link
G MEGF9 multiple EGF like domains 9 located_in ISO (MGI:3699792|PMID:16981854) MGI PMID:16981854 MGI:3699792 NCBI chr11:73,716,395...73,793,072 JBrowse link
G MMRN2 multimerin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,577,072...34,604,521
Ensembl chr 4:34,589,597...34,605,576 		JBrowse link
G NID1 nidogen 1 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:3,935,218...4,018,133
Ensembl chr 4:3,935,223...4,017,300 		JBrowse link
G NID2 nidogen 2 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt
UniProt		 PMID:21873635 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:28,240,427...28,300,729
Ensembl chr 8:28,102,780...28,300,507 		JBrowse link
G NPNT nephronectin located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275 		JBrowse link
G NTN1 netrin 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899 		JBrowse link
G NTN3 netrin 3 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:38,558,942...38,561,437
Ensembl chr 6:38,558,150...38,561,323 		JBrowse link
G NTN4 netrin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:35,527,491...35,650,170
Ensembl chr15:35,528,133...35,649,566 		JBrowse link
G NTN5 netrin 5 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:107,651,495...107,653,904
Ensembl chr 1:107,647,674...107,655,020 		JBrowse link
G P3H1 prolyl 3-hydroxylase 1 located_in ISO PMID:10455179 MGI PMID:10455179 RGD:633221 NCBI chr15:603,436...621,839
Ensembl chr15:603,329...621,568 		JBrowse link
G P3H2 prolyl 3-hydroxylase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,035,124...22,185,146
Ensembl chr34:22,023,068...22,185,026 		JBrowse link
G PAPLN papilin, proteoglycan like sulfated glycoprotein located_in ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chr 8:46,587,197...46,620,381
Ensembl chr 8:46,592,854...46,618,612 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:9990431 RGD:10044215 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G PXDN peroxidasin located_in IEA Ensembl GO_REF:0000107 NCBI chr17:834,625...891,551
Ensembl chr17:836,434...875,117 		JBrowse link
G RELL2 RELT like 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:36,598,175...36,602,607
Ensembl chr 2:36,599,149...36,602,020 		JBrowse link
G RPSA ribosomal protein SA ISO RGD PMID:11553521 RGD:2299067 NCBI chr23:9,070,953...9,077,058
Ensembl chr23:9,070,953...9,077,057 		JBrowse link
G RUNX1 RUNX family transcription factor 1 located_in ISO (MGI:3692798|PMID:17011173) MGI PMID:17011173 MGI:3692798 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839 		JBrowse link
G SERPINF1 serpin family F member 1 ISO RGD PMID:15616035 RGD:1359799 NCBI chr 9:45,891,368...45,902,768
Ensembl chr 9:45,891,410...45,902,765 		JBrowse link
G SMC3 structural maintenance of chromosomes 3 ISO RGD PMID:9015313 RGD:61563 NCBI chr28:21,889,690...21,928,367
Ensembl chr28:21,889,662...21,928,034 		JBrowse link
G SMOC1 SPARC related modular calcium binding 1 located_in
is_active_in		 ISO
IBA		 (MGI:3807344|PMID:18757743)
(PMID:21873635)		 MGI
GO_Central		 PMID:18757743 PMID:21873635 MGI:3807344 NCBI chr 8:43,608,511...43,763,262
Ensembl chr 8:43,607,634...43,763,274 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 located_in
is_active_in		 ISO
IBA		 (MGI:3807344|PMID:18757743)
(PMID:21873635)		 MGI
GO_Central		 PMID:18757743 PMID:21873635 MGI:3807344 NCBI chr 1:55,826,354...55,986,053
Ensembl chr 1:55,825,666...55,986,052 		JBrowse link
G SPARC secreted protein acidic and cysteine rich located_in IEA UniProt
UniProt		 GO_REF:0000043 GO_REF:0000044 NCBI chr 4:57,659,541...57,682,147
Ensembl chr 4:57,659,650...57,681,711 		JBrowse link
G SPN sialophorin located_in ISO (MGI:66056|PMID:7514104) MGI PMID:7514104 MGI:66056 NCBI chr 6:17,770,303...17,774,946 JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:16479080 RGD:2302094 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGFBI transforming growth factor beta induced ISO RGD PMID:12911551 RGD:1304421 NCBI chr11:23,932,038...23,971,983
Ensembl chr11:23,938,453...23,971,607 		JBrowse link
G THBS2 thrombospondin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,402,519...56,429,975
Ensembl chr 1:56,402,524...56,451,892 		JBrowse link
G THBS4 thrombospondin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:26,945,001...26,982,224
Ensembl chr 3:26,945,081...26,988,597 		JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 located_in ISO
IEA		 RGD
Ensembl
Ensembl		 PMID:9579471 GO_REF:0000107 RGD:2290365 NCBI chr  X:41,201,623...41,205,314
Ensembl chr  X:41,201,638...41,205,310 		JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 located_in ISO (MGI:2675517|PMID:12950084) MGI PMID:12950084 MGI:2675517 NCBI chr 9:2,521,882...2,533,883
Ensembl chr 9:2,521,882...2,533,989 		JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:30,627,154...30,681,520
Ensembl chr10:30,627,154...30,694,288 		JBrowse link
G TINAG tubulointerstitial nephritis antigen located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:21,787,042...21,879,867
Ensembl chr12:21,786,669...21,879,091 		JBrowse link
G TMEFF1 transmembrane protein with EGF like and two follistatin like domains 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:57,331,085...57,453,023
Ensembl chr11:57,331,079...57,452,399 		JBrowse link
G TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:2,414,208...2,635,283
Ensembl chr37:2,414,440...2,635,431 		JBrowse link
G TNC tenascin C located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G USH2A usherin is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr38:11,063,221...11,750,444
Ensembl chr38:11,063,817...11,750,444 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:11940521 RGD:628330 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
G VTN vitronectin ISO RGD PMID:11728964 RGD:10003096 NCBI chr 9:42,617,860...42,620,825
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:56,578,256...56,583,552
Ensembl chr 5:56,578,297...56,582,502 		JBrowse link
G VWA2 von Willebrand factor A domain containing 2 located_in
is_active_in		 IEA
IBA		 (PMID:21873635) InterPro
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr28:25,089,499...25,136,879
Ensembl chr28:25,089,499...25,136,893 		JBrowse link
G VWC2 von Willebrand factor C domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,248,612...1,350,965
Ensembl chr18:1,257,357...1,350,856 		JBrowse link
collagen type I trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain part_of
located_in		 IBA
IEA
ISO		 (PMID:21873635)
(PMID:26848503), (PMID:28281531)		 GO_Central
GO_Central
Ensembl
ComplexPortal		 PMID:21873635 PMID:26848503 PMID:28281531 GO_REF:0000107 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927 		JBrowse link
G COL1A2 collagen type I alpha 2 chain located_in
part_of		 ISO
IBA
IEA		 (PMID:26848503)
(PMID:21873635)		 ComplexPortal
GO_Central
Ensembl
GO_Central		 PMID:21873635 PMID:26848503 GO_REF:0000107 NCBI chr14:19,883,731...19,919,527
Ensembl chr14:19,883,868...19,919,527 		JBrowse link
collagen type II trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
collagen type III trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain part_of IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765 		JBrowse link
collagen type IV trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A1 collagen type IV alpha 1 chain part_of IEA Ensembl GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr22:58,656,579...58,820,560
Ensembl chr22:58,697,175...58,773,297 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain part_of IEA Ensembl GO_REF:0000107 NCBI chr25:39,975,547...40,106,833
Ensembl chr25:39,975,586...40,104,782 		JBrowse link
G COL4A4 collagen type IV alpha 4 chain part_of IBA
IEA
ISS		 (PMID:21873635) GO_Central
Ensembl
UniProt		 PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr25:39,849,680...39,976,035
Ensembl chr25:39,854,388...39,976,189 		JBrowse link
G COL4A5 collagen type IV alpha 5 chain part_of IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr  X:81,982,119...82,248,428
Ensembl chr  X:81,982,275...82,247,679 		JBrowse link
G COL4A6 collagen type IV alpha 6 chain part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr  X:81,690,047...81,981,005
Ensembl chr  X:81,691,417...81,980,703 		JBrowse link
G LOC609026 C1q and TNF related 9 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:14,735,370...14,748,054 JBrowse link
G OTOL1 otolin 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr34:27,405,456...27,454,726
Ensembl chr34:27,413,694...27,455,023 		JBrowse link
collagen type V trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL16A1 collagen type XVI alpha 1 chain part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:69,410,283...69,459,382
Ensembl chr 2:69,410,155...69,459,335 		JBrowse link
G COL5A1 collagen type V alpha 1 chain part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 9:50,706,852...50,856,691
Ensembl chr 9:50,770,277...50,854,728 		JBrowse link
G COL5A2 collagen type V alpha 2 chain part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr36:30,538,863...30,677,450
Ensembl chr36:30,540,229...30,691,564 		JBrowse link
G COL5A3 collagen type V alpha 3 chain part_of IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr20:51,037,604...51,075,220
Ensembl chr20:51,037,621...51,074,993 		JBrowse link
collagen type X trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL10A1 collagen type X alpha 1 chain located_in
part_of		 ISO
IEA		 (PMID:11839302) ComplexPortal
Ensembl		 PMID:11839302 GO_REF:0000107 NCBI chr12:71,803,372...71,810,049
Ensembl chr12:71,798,692...71,809,399 		JBrowse link
collagen type XI trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL11A1 collagen type XI alpha 1 chain part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
collagen type XII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL12A1 collagen type XII alpha 1 chain ISO RGD PMID:10419532 RGD:727275 NCBI chr12:36,720,686...36,838,321
Ensembl chr12:36,646,408...36,838,622 		JBrowse link
collagen-containing extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:15777654 RGD:9681749 NCBI chr31:22,169,821...22,178,879
Ensembl chr31:22,170,381...22,178,945 		JBrowse link
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 located_in ISO (PMID:21402694) UniProt PMID:21402694 NCBI chr20:53,090,819...53,110,533
Ensembl chr20:53,090,800...53,108,493 		JBrowse link
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 located_in IEA InterPro GO_REF:0000002 NCBI chr 5:4,457,879...4,480,210
Ensembl chr 5:4,457,959...4,479,875 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr11:2,279,983...2,504,630
Ensembl chr11:2,280,108...2,502,635 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 located_in IEA InterPro GO_REF:0000002 NCBI chr31:22,242,901...22,289,453
Ensembl chr31:22,248,092...22,289,802 		JBrowse link
G ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr 5:4,479,874...4,517,211
Ensembl chr 5:4,496,791...4,516,594 		JBrowse link
G AGRN agrin located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745 		JBrowse link
G AHSG alpha 2-HS glycoprotein ISO RGD PMID:7794128 RGD:1626075 NCBI chr34:19,221,034...19,228,866
Ensembl chr34:19,221,107...19,228,716 		JBrowse link
G AMELX amelogenin X-linked located_in
is_active_in		 IEA
IBA		 (PMID:21873635) Ensembl
GO_Central
InterPro
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr  X:7,822,513...7,828,692
Ensembl chr  X:7,822,859...7,830,351 		JBrowse link
G ANGPT1 angiopoietin 1 is_active_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr13:8,068,920...8,312,090
Ensembl chr13:8,048,205...8,311,618 		JBrowse link
G ANGPT2 angiopoietin 2 is_active_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr16:58,404,049...58,458,344
Ensembl chr16:58,405,259...58,457,701 		JBrowse link
G ANGPT4 angiopoietin 4 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:20,021,625...20,068,805
Ensembl chr24:20,022,322...20,064,023 		JBrowse link
G ANGPTL1 angiopoietin like 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:20,919,192...20,945,140
Ensembl chr 7:20,919,214...20,940,792 		JBrowse link
G ANGPTL2 angiopoietin like 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:56,184,298...56,220,309
Ensembl chr 9:56,198,423...56,218,751 		JBrowse link
G ANGPTL3 angiopoietin like 3 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:47,524,390...47,532,931
Ensembl chr 5:47,525,365...47,532,899 		JBrowse link
G ANGPTL4 angiopoietin like 4 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:52,942,090...52,948,126
Ensembl chr20:52,942,259...52,947,475 		JBrowse link
G ANGPTL5 angiopoietin like 5 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:29,543,987...29,682,998
Ensembl chr 5:29,544,234...29,679,594 		JBrowse link
G ANGPTL6 angiopoietin like 6 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:50,953,029...50,961,598
Ensembl chr20:50,953,498...50,961,576 		JBrowse link
G ANGPTL7 angiopoietin like 7 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,876,881...84,883,582
Ensembl chr 2:84,877,682...84,883,160 		JBrowse link
G ANO2 anoctamin 2 located_in IEA UniProt
UniProt		 GO_REF:0000104 NCBI chr27:38,976,761...39,320,764
Ensembl chr27:38,833,837...39,320,142 		JBrowse link
G B9D2 B9 domain containing 2 located_in ISO (PMID:23979707) RGD
ComplexPortal		 PMID:23979707 PMID:24224514 RGD:11073670 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein located_in IDA (PMID:8101026), (PMID:8218200) CAFA
CAFA		 PMID:8101026 PMID:8218200 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791 		JBrowse link
G BMP7 bone morphogenetic protein 7 ISO RGD PMID:9626398 RGD:2289041 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CALR calreticulin ISO RGD PMID:12782144 RGD:2326184 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245 		JBrowse link
G CCN3 cellular communication network factor 3 ISO RGD PMID:19286457 RGD:2306292 NCBI chr13:18,507,586...18,515,755
Ensembl chr13:18,507,580...18,514,619 		JBrowse link
G CHADL chondroadherin like located_in ISO (PMID:25451920)
(MGI:5617405|PMID:25451920)		 UniProt PMID:25451920 MGI:5617405 NCBI chr10:23,992,848...24,006,492
Ensembl chr10:23,953,912...24,003,162 		JBrowse link
G CILP cartilage intermediate layer protein located_in IEA Ensembl GO_REF:0000107 NCBI chr30:29,626,675...29,649,992
Ensembl chr30:29,573,184...29,650,883 		JBrowse link
G CILP cartilage intermediate layer protein is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr30:29,573,072...29,587,601
Ensembl chr30:29,573,184...29,650,883 		JBrowse link
G CLU clusterin colocalizes_with ISS BHF-UCL
UniProt		 GO_REF:0000024 NCBI chr25:29,982,811...29,999,565
Ensembl chr25:29,982,811...29,999,563 		JBrowse link
G COCH cochlin is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:10,215,101...10,230,017
Ensembl chr 8:10,214,536...10,233,550 		JBrowse link
G COL10A1 collagen type X alpha 1 chain located_in ISO (PMID:17876790) RGD
ComplexPortal		 PMID:7649371 PMID:17876790 RGD:1298775 NCBI chr12:71,803,372...71,810,049
Ensembl chr12:71,798,692...71,809,399 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain ISO RGD PMID:17062562 RGD:1600882 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
G COL12A1 collagen type XII alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:36,720,686...36,838,321
Ensembl chr12:36,646,408...36,838,622 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:19,033,423...19,249,189
Ensembl chr13:19,011,897...19,248,568 		JBrowse link
G COL1A1 collagen type I alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927 		JBrowse link
G COL1A2 collagen type I alpha 2 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr14:19,883,731...19,919,527
Ensembl chr14:19,883,868...19,919,527 		JBrowse link
G COL20A1 collagen type XX alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:46,998,645...47,018,410
Ensembl chr24:46,998,138...47,016,401 		JBrowse link
G COL21A1 collagen type XXI alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:23,359,350...23,587,689
Ensembl chr12:23,360,372...23,529,713 		JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:7649371 RGD:1298775 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G COL3A1 collagen type III alpha 1 chain located_in ISO
IEA		 RGD
Ensembl		 PMID:20610530 GO_REF:0000107 RGD:7257557 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765 		JBrowse link
G COL5A1 collagen type V alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,706,852...50,856,691
Ensembl chr 9:50,770,277...50,854,728 		JBrowse link
G COL5A3 collagen type V alpha 3 chain ISO RGD PMID:15383532 RGD:5683638 NCBI chr20:51,037,604...51,075,220
Ensembl chr20:51,037,621...51,074,993 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:39,301,718...39,319,895
Ensembl chr31:39,301,748...39,448,062 		JBrowse link
G COL6A3 collagen type VI alpha 3 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:47,971,439...48,052,673
Ensembl chr25:47,971,315...48,052,402 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:40,519,121...40,550,305
Ensembl chr20:40,519,378...40,552,935 		JBrowse link
G COMP cartilage oligomeric matrix protein is_active_in ISO
IBA		 (PMID:21873635) RGD
GO_Central		 PMID:16778685 PMID:21873635 RGD:1600712 NCBI chr20:44,306,813...44,314,575
Ensembl chr20:44,306,859...44,314,625 		JBrowse link
G DMBT1 deleted in malignant brain tumors 1 ISO RGD PMID:11121438 RGD:1599784 NCBI chr28:32,198,250...32,286,517
Ensembl chr28:32,219,448...32,286,532 		JBrowse link
G DSPP dentin sialophosphoprotein ISO RGD PMID:16776771 RGD:1599799 NCBI chr32:11,017,440...11,022,780 JBrowse link
G ECM1 extracellular matrix protein 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr17:59,696,125...59,701,990
Ensembl chr17:59,696,477...59,701,744 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 located_in IEA InterPro GO_REF:0000002 NCBI chr10:56,632,801...56,694,872
Ensembl chr10:56,579,899...56,787,187 		JBrowse link
G ELN elastin located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr 6:6,299,524...6,331,425
Ensembl chr 6:6,300,727...6,331,325 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,071,502...21,078,888
Ensembl chr17:21,071,580...21,078,889 		JBrowse link
G F2 coagulation factor II, thrombin is_active_in ISO
IBA		 (PMID:21873635) RGD
GO_Central		 PMID:21191574 PMID:21873635 RGD:7387308 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459 		JBrowse link
G F3 coagulation factor III, tissue factor located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,709,581...54,720,603
Ensembl chr 6:54,708,471...54,720,607 		JBrowse link
G FBLN2 fibulin 2 located_in IEA InterPro GO_REF:0000002 NCBI chr20:3,874,896...3,935,059
Ensembl chr20:3,874,896...3,934,717 		JBrowse link
G FBLN5 fibulin 5 colocalizes_with
located_in		 ISO
IEA		 (MGI:3610795|PMID:15528465) BHF-UCL
Ensembl		 PMID:15528465 GO_REF:0000107 MGI:3610795 NCBI chr 8:1,162,203...1,231,809
Ensembl chr 8:1,162,923...1,231,719 		JBrowse link
G FBN1 fibrillin 1 located_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:15849235 GO_REF:0000002 GO_REF:0000107 RGD:1601147 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FBN2 fibrillin 2 located_in IEA InterPro GO_REF:0000002 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G FBN3 fibrillin 3 located_in IEA InterPro GO_REF:0000002 NCBI chr20:52,723,995...52,777,319
Ensembl chr20:52,724,651...52,776,884 		JBrowse link
G FCN2 ficolin 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:50,868,942...50,876,001
Ensembl chr 9:50,868,973...50,875,792 		JBrowse link
G FGF10 fibroblast growth factor 10 colocalizes_with
located_in		 ISO
IEA		 (PMID:17959718) UniProt
Ensembl
Ensembl		 PMID:17959718 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 colocalizes_with
located_in		 ISO
IEA		 (PMID:17959718) UniProt
Ensembl		 PMID:17959718 GO_REF:0000107 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FGL1 fibrinogen like 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:41,161,314...41,191,282
Ensembl chr16:41,161,394...41,179,791 		JBrowse link
G FGL2 fibrinogen like 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:17,328,794...17,335,429
Ensembl chr18:17,331,780...17,335,401 		JBrowse link
G FIBCD1 fibrinogen C domain containing 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,073,859...53,106,266
Ensembl chr 9:53,073,027...53,103,937 		JBrowse link
G FMOD fibromodulin located_in IEA
ISO		 InterPro
RGD		 PMID:12941075 GO_REF:0000002 RGD:2315082 NCBI chr38:102,106...112,267
Ensembl chr38:103,230...112,154 		JBrowse link
G FN1 fibronectin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123 		JBrowse link
G GPC1 glypican 1 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr25:50,484,554...50,492,940
Ensembl chr25:50,482,071...50,515,877 		JBrowse link
G GPC2 glypican 2 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr 6:9,354,181...9,361,361
Ensembl chr 6:9,354,535...9,361,375 		JBrowse link
G GPC3 glypican 3 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756 		JBrowse link
G GPC4 glypican 4 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr  X:104,098,316...104,215,883
Ensembl chr  X:104,100,571...104,216,103 		JBrowse link
G GPC5 glypican 5 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr22:42,526,426...43,873,992
Ensembl chr22:42,526,054...43,870,405 		JBrowse link
G GPC6 glypican 6 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr22:44,154,690...45,237,398
Ensembl chr22:44,154,944...45,233,549 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:15497505 RGD:2316936 NCBI chr 8:70,091,203...70,096,107
Ensembl chr 8:70,092,217...70,095,243 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 ISO RGD PMID:15928048 RGD:1624263 NCBI chr 2:77,263,534...77,366,558
Ensembl chr 2:77,301,858...77,367,724 		JBrowse link
G HTRA1 HtrA serine peptidase 1 ISO dentin matrix RGD PMID:22595117 RGD:7394756 NCBI chr28:32,133,779...32,157,835
Ensembl chr28:32,132,547...32,157,409 		JBrowse link
G LAMB1 laminin subunit beta 1 ISO RGD PMID:15928048 RGD:1624263 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMC1 laminin subunit gamma 1 ISO RGD PMID:15928048 RGD:1624263 NCBI chr 7:16,406,421...16,528,372
Ensembl chr 7:16,404,495...16,526,000 		JBrowse link
G LOC100688853 phospholipid scramblase 1-like located_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,591,425...41,625,918
Ensembl chr23:41,599,843...41,669,112 		JBrowse link
G LOC119868741 amelogenin, X isoform-like located_in IEA InterPro GO_REF:0000002
G LOC607055 angiopoietin-related protein 5-like is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:17,040,257...17,042,108 JBrowse link
G LRRC15 leucine rich repeat containing 15 colocalizes_with
located_in		 ISO
IEA		 (PMID:16098915) UniProt
Ensembl		 PMID:16098915 GO_REF:0000107 NCBI chr33:31,332,502...31,345,895
Ensembl chr33:31,332,496...31,342,583 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:9766531 GO_REF:0000107 RGD:10412061 NCBI chr17:26,129,528...26,521,782
Ensembl chr17:26,130,781...26,521,779 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,653,783...51,667,793
Ensembl chr18:51,659,098...51,667,433 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,124,109...113,152,283
Ensembl chr 1:113,124,109...113,150,442 		JBrowse link
G MATN2 matrilin 2 located_in
is_active_in		 ISO
IBA		 (MGI:1336568|PMID:10224097)
(PMID:21873635)		 ComplexPortal
GO_Central		 PMID:10224097 PMID:21873635 MGI:1336568 NCBI chr13:149,108...296,005
Ensembl chr13:149,095...295,994 		JBrowse link
G MATN3 matrilin 3 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr17:15,037,175...15,054,451
Ensembl chr17:15,037,995...15,054,436 		JBrowse link
G MATN4 matrilin 4 located_in
is_active_in		 ISO
IBA		 (MGI:1934728|PMID:11279097)
(PMID:21873635)		 ComplexPortal
GO_Central		 PMID:11279097 PMID:21873635 MGI:1934728 NCBI chr24:32,601,175...32,614,109
Ensembl chr24:32,599,508...32,613,872 		JBrowse link
G MFAP4 microfibril associated protein 4 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 5:40,828,548...40,831,757
Ensembl chr 5:40,828,282...40,831,495 		JBrowse link
G MGP matrix Gla protein located_in ISO
IEA		 RGD
InterPro
InterPro		 PMID:11716499 GO_REF:0000002 RGD:2293597 NCBI chr27:31,735,301...31,738,673
Ensembl chr27:31,734,660...31,738,673 		JBrowse link
G MMRN1 multimerin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr32:13,111,043...13,184,681
Ensembl chr32:13,110,969...13,184,649 		JBrowse link
G MMRN2 multimerin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,577,072...34,604,521
Ensembl chr 4:34,589,597...34,605,576 		JBrowse link
G MYOC myocilin located_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:27,335,314...27,346,821
Ensembl chr 7:27,335,314...27,346,820 		JBrowse link
G NDP norrin cystine knot growth factor NDP located_in ISO (PMID:15035989)
(MGI:3621833|PMID:15035989)		 BHF-UCL PMID:15035989 MGI:3621833 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NPNT nephronectin located_in IEA Ensembl GO_REF:0000107 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275 		JBrowse link
G OMD osteomodulin located_in IEA InterPro GO_REF:0000002 NCBI chr 1:98,923,507...98,933,751
Ensembl chr 1:98,929,274...98,931,219 		JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 3:39,582,804...39,768,838
Ensembl chr 3:39,582,819...39,767,929 		JBrowse link
G PLAT plasminogen activator, tissue type NOT|located_in ISO (PMID:1632457) BHF-UCL PMID:1632457 NCBI chr16:23,469,590...23,496,013 JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,664,135...8,671,637
Ensembl chr 6:8,664,358...8,671,620 		JBrowse link
G PLSCR1 phospholipid scramblase 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112 		JBrowse link
G PODNL1 podocan like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,543,572...48,548,689
Ensembl chr20:48,526,786...48,548,689 		JBrowse link
G POSTN periostin located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr25:3,167,319...3,208,970
Ensembl chr25:3,167,359...3,208,411 		JBrowse link
G PRELP proline and arginine rich end leucine rich repeat protein located_in IEA InterPro GO_REF:0000002 NCBI chr38:198,681...212,320
Ensembl chr38:198,583...209,937 		JBrowse link
G PRG4 proteoglycan 4 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:19,360,034...19,377,005
Ensembl chr 7:19,364,609...19,376,999 		JBrowse link
G PXDN peroxidasin located_in IEA Ensembl GO_REF:0000107 NCBI chr17:834,625...891,551
Ensembl chr17:836,434...875,117 		JBrowse link
G RARRES2 retinoic acid receptor responder 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr16:14,671,345...14,675,000
Ensembl chr16:14,671,130...14,674,926 		JBrowse link
G RPSA ribosomal protein SA ISO RGD PMID:11553521 RGD:2299067 NCBI chr23:9,070,953...9,077,058
Ensembl chr23:9,070,953...9,077,057 		JBrowse link
G SEBOX SEBOX homeobox located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,614,770...42,616,412
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G SERPINE1 serpin family E member 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:8,719,547...8,727,160
Ensembl chr 6:8,720,825...8,726,301 		JBrowse link
G SERPINE2 serpin family E member 2 located_in ISO (PMID:3279057) BHF-UCL PMID:3279057 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228 		JBrowse link
G SFRP1 secreted frizzled related protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964 		JBrowse link
G SFRP2 secreted frizzled related protein 2 located_in IDA (PMID:14709558) BHF-UCL
BHF-UCL		 PMID:14709558 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr 1:55,826,354...55,986,053
Ensembl chr 1:55,825,666...55,986,052 		JBrowse link
G SNORC secondary ossification center associated regulator of chondrocyte maturation located_in IEA Ensembl GO_REF:0000107 NCBI chr25:44,453,804...44,472,159
Ensembl chr25:44,466,852...44,470,935 		JBrowse link
G SOD3 superoxide dismutase 3 located_in
colocalizes_with		 ISO
IEA		 (MGI:3610795|PMID:15528465) RGD
Ensembl
BHF-UCL		 PMID:15528465 PMID:16372329 GO_REF:0000107 MGI:3610795 RGD:1581086 NCBI chr 3:85,382,698...85,387,144
Ensembl chr 3:85,382,484...85,387,455 		JBrowse link
G SPARCL1 SPARC like 1 located_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr32:10,900,072...10,944,392
Ensembl chr32:10,900,283...10,944,449 		JBrowse link
G SSC5D scavenger receptor cysteine rich family member with 5 domains located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,195,426...102,222,352
Ensembl chr 1:102,196,890...102,221,444 		JBrowse link
G TECTA tectorin alpha located_in IEA InterPro GO_REF:0000002 NCBI chr 5:12,879,963...12,949,211
Ensembl chr 5:12,879,951...12,949,147 		JBrowse link
G TGFB2 transforming growth factor beta 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGFB3 transforming growth factor beta 3 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816 		JBrowse link
G THBS1 thrombospondin 1 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:6,770,212...6,786,875
Ensembl chr30:6,769,470...6,784,915 		JBrowse link
G THBS2 thrombospondin 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:56,402,519...56,429,975
Ensembl chr 1:56,402,524...56,451,892 		JBrowse link
G THBS3 thrombospondin 3 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:42,327,899...42,338,177
Ensembl chr 7:42,328,592...42,338,171 		JBrowse link
G THBS4 thrombospondin 4 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 3:26,945,001...26,982,224
Ensembl chr 3:26,945,081...26,988,597 		JBrowse link
G TNC tenascin C located_in IEA Ensembl GO_REF:0000107 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G TNN tenascin N is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 7:24,246,481...24,342,686
Ensembl chr 7:24,230,930...24,308,520 		JBrowse link
G TNR tenascin R is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
G TNXB tenascin XB located_in IEA InterPro GO_REF:0000002 NCBI chr12:1,453,227...1,510,171
Ensembl chr12:1,453,260...1,509,749 		JBrowse link
G VCAN versican ISO RGD PMID:12586779 RGD:1299255 NCBI chr 3:24,127,293...24,238,859
Ensembl chr 3:24,119,181...24,239,192 		JBrowse link
G VIT vitrin is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:29,142,924...29,259,800
Ensembl chr17:29,143,069...29,243,406 		JBrowse link
G VTN vitronectin located_in
is_active_in		 ISO
IEA
IBA		 (PMID:21873635) RGD
Ensembl
GO_Central		 PMID:2426279 PMID:21873635 GO_REF:0000107 RGD:10003088 NCBI chr 9:42,617,860...42,620,825
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G VWA2 von Willebrand factor A domain containing 2 is_active_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:25,089,499...25,136,879
Ensembl chr28:25,089,499...25,136,893 		JBrowse link
G VWF von Willebrand factor located_in ISS
IEA
ISO		 UniProt
Ensembl
UniProt
RGD		 PMID:14762664 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 RGD:1599021 NCBI chr27:38,834,812...38,972,614
Ensembl chr27:38,833,837...39,320,142 		JBrowse link
G WNT2 Wnt family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069 		JBrowse link
G ZG16 zymogen granule protein 16 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,840,430...17,842,008
Ensembl chr 6:17,839,553...17,842,006 		JBrowse link
G ZP1 zona pellucida glycoprotein 1 located_in ISO (MGI:2177349|PMID:11906903) UniProt PMID:11906903 MGI:2177349 NCBI chr18:55,405,991...55,416,033 JBrowse link
G ZP2 zona pellucida glycoprotein 2 located_in
is_active_in		 ISS
IEA
IBA		 (PMID:21873635) UniProt
Ensembl
UniProt
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:24,230,202...24,242,441
Ensembl chr 6:24,230,201...24,242,451 		JBrowse link
G ZP3 zona pellucida glycoprotein 3 located_in ISS
IEA		 UniProt
Ensembl
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:7,586,212...7,594,610
Ensembl chr 6:7,585,970...7,594,610 		JBrowse link
cone matrix sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBP3 retinol binding protein 3 located_in
is_active_in		 ISO
IBA		 (PMID:21935947)
(PMID:21873635)		 AgBase
GO_Central		 PMID:21873635 PMID:21935947 NCBI chr 4:34,974,559...34,983,460
Ensembl chr 4:34,974,638...34,982,907 		JBrowse link
egg coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OVGP1 oviductal glycoprotein 1 located_in ISO (MGI:4397628|PMID:19808884) MGI PMID:19808884 MGI:4397628 NCBI chr17:63,955,766...63,985,878
Ensembl chr17:63,957,251...63,983,421 		JBrowse link
G ZP1 zona pellucida glycoprotein 1 located_in ISO (PMID:29895852) UniProt PMID:29895852 NCBI chr18:55,405,991...55,416,033 JBrowse link
G ZP2 zona pellucida glycoprotein 2 located_in
is_active_in		 ISS
IBA
IEA		 (PMID:21873635) UniProt
GO_Central
Ensembl
UniProt
Ensembl		 PMID:21873635 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 6:24,230,202...24,242,441
Ensembl chr 6:24,230,201...24,242,451 		JBrowse link
G ZP3 zona pellucida glycoprotein 3 located_in ISS
IEA		 UniProt
UniProt		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000104 NCBI chr 6:7,586,212...7,594,610
Ensembl chr 6:7,585,970...7,594,610 		JBrowse link
G ZP4 zona pellucida glycoprotein 4 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr 4:2,324,657...2,332,357
Ensembl chr 4:2,324,226...2,331,470 		JBrowse link
elastic fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107 		JBrowse link
G ELN elastin located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,299,524...6,331,425
Ensembl chr 6:6,300,727...6,331,325 		JBrowse link
G FBLN1 fibulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:20,498,097...20,564,776
Ensembl chr10:20,498,567...20,627,836 		JBrowse link
G FBLN5 fibulin 5 colocalizes_with ISO (MGI:2681471|PMID:11805834) BHF-UCL PMID:11805834 MGI:2681471 NCBI chr 8:1,162,203...1,231,809
Ensembl chr 8:1,162,923...1,231,719 		JBrowse link
G MFAP4 microfibril associated protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,828,548...40,831,757
Ensembl chr 5:40,828,282...40,831,495 		JBrowse link
EMILIN complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EMILIN1 elastin microfibril interfacer 1 located_in
part_of		 ISO
IEA		 (PMID:10821830) ComplexPortal
Ensembl		 PMID:10821830 GO_REF:0000107 NCBI chr17:21,071,502...21,078,888
Ensembl chr17:21,071,580...21,078,889 		JBrowse link
extracellular matrix of synaptic cleft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B11 hydroxysteroid 17-beta dehydrogenase 11 is_active_in ISO PMID:17151913 SynGO PMID:17151913 RGD:13702411 NCBI chr32:10,821,332...10,854,541
Ensembl chr32:10,794,617...10,854,193 		JBrowse link
G LAMA5 laminin subunit alpha 5 is_active_in ISO (MGI:6103988|PMID:29091766) SynGO PMID:29091766 MGI:6103988 NCBI chr24:46,315,008...46,351,279 JBrowse link
G TNR tenascin R is_active_in ISO PMID:21734302 SynGO PMID:21734302 RGD:155230724 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
fibrillar collagen trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL27A1 collagen type XXVII alpha 1 chain part_of ISO (MGI:3709703|PMID:17331945) MGI PMID:17331945 MGI:3709703 NCBI chr11:68,413,101...68,548,408
Ensembl chr11:68,420,263...68,546,947 		JBrowse link
G LUM lumican part_of IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr15:31,792,872...31,800,444
Ensembl chr15:31,793,233...31,800,912 		JBrowse link
interphotoreceptor matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPG1 interphotoreceptor matrix proteoglycan 1 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr12:37,506,511...37,614,683
Ensembl chr12:37,507,525...37,638,250 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr33:7,706,069...7,785,817
Ensembl chr33:7,709,683...7,785,309 		JBrowse link
G RBP3 retinol binding protein 3 ISO RGD PMID:8282025 RGD:6893658 NCBI chr 4:34,974,559...34,983,460
Ensembl chr 4:34,974,638...34,982,907 		JBrowse link
G RTBDN retbindin located_in IEA UniProt
UniProt		 GO_REF:0000044 NCBI chr20:49,324,843...49,337,226
Ensembl chr20:49,334,127...49,337,223 		JBrowse link
interstitial matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chr33:7,265,804...7,498,973
Ensembl chr33:7,266,685...7,418,106 		JBrowse link
G ADAMTSL4 ADAMTS like 4 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr17:59,736,628...59,747,689
Ensembl chr17:59,736,534...59,746,980 		JBrowse link
G C12H6orf15 chromosome 12 C6orf15 homolog located_in ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chr12:815,319...817,444
Ensembl chr12:815,483...816,767 		JBrowse link
G CCDC80 coiled-coil domain containing 80 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:17,105,086...17,141,380
Ensembl chr33:17,105,086...17,139,896 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain located_in
is_active_in		 ISO
IBA		 (MGI:5444801|PMID:22906538)
(PMID:21873635)		 MGI
GO_Central		 PMID:21873635 PMID:22906538 MGI:5444801 NCBI chr13:19,033,423...19,249,189
Ensembl chr13:19,011,897...19,248,568 		JBrowse link
G ECM2 extracellular matrix protein 2 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:98,832,107...98,865,084
Ensembl chr 1:98,832,677...98,864,700 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 4:70,391,657...70,574,629
Ensembl chr 4:70,392,330...70,575,225 		JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:15544842 RGD:1580475 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 is_active_in
located_in		 IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr28:13,741,085...13,745,426
Ensembl chr28:13,742,322...13,745,119 		JBrowse link
G MAMDC2 MAM domain containing 2 located_in ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chr 1:87,303,230...87,451,197
Ensembl chr 1:87,304,216...87,451,037 		JBrowse link
G NAV2 neuron navigator 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813 		JBrowse link
G NEPN nephrocan located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:57,837,927...57,859,346 JBrowse link
G SMOC2 SPARC related modular calcium binding 2 located_in ISO (MGI:3807344|PMID:18757743) MGI PMID:18757743 MGI:3807344 NCBI chr 1:55,826,354...55,986,053
Ensembl chr 1:55,825,666...55,986,052 		JBrowse link
G TNC tenascin C located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G VIT vitrin located_in
is_active_in		 IEA
IBA		 (PMID:21873635) Ensembl
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr17:29,142,924...29,259,800
Ensembl chr17:29,143,069...29,243,406 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:56,578,256...56,583,552
Ensembl chr 5:56,578,297...56,582,502 		JBrowse link
G VWC2 von Willebrand factor C domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,248,612...1,350,965
Ensembl chr18:1,257,357...1,350,856 		JBrowse link
laminin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LAMB1 laminin subunit beta 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMB2 laminin subunit beta 2 part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
G LAMB3 laminin subunit beta 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:8,272,326...8,313,322
Ensembl chr 7:8,272,736...8,310,474 		JBrowse link
G LAMB4 laminin subunit beta 4 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:12,517,124...12,609,253
Ensembl chr18:12,509,774...12,608,862 		JBrowse link
G NTN4 netrin 4 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:35,527,491...35,650,170
Ensembl chr15:35,528,133...35,649,566 		JBrowse link
G NTNG1 netrin G1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:44,091,368...44,407,118
Ensembl chr 6:44,092,043...44,403,799 		JBrowse link
G NTNG2 netrin G2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr 9:51,992,599...52,059,902 JBrowse link
G PMP22 peripheral myelin protein 22 part_of ISO (MGI:3613258|PMID:16436605) MGI PMID:16436605 MGI:3613258 NCBI chr 5:38,806,731...38,839,002
Ensembl chr 5:38,807,826...38,838,971 		JBrowse link
laminin-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LAMB1 laminin subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMC1 laminin subunit gamma 1 ISO RGD PMID:8648916 RGD:633159 NCBI chr 7:16,406,421...16,528,372
Ensembl chr 7:16,404,495...16,526,000 		JBrowse link
laminin-10 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA5 laminin subunit alpha 5 part_of ISO (PMID:10964500)
(MGI:1097278|PMID:9299121)		 UniProt
MGI		 PMID:9299121 PMID:10964500 MGI:1097278 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LAMB1 laminin subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMC1 laminin subunit gamma 1 part_of ISO (MGI:1097278|PMID:9299121) MGI PMID:9299121 MGI:1097278 NCBI chr 7:16,406,421...16,528,372
Ensembl chr 7:16,404,495...16,526,000 		JBrowse link
laminin-2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMC2 laminin subunit gamma 2 ISO RGD PMID:9417868 RGD:633095 NCBI chr 7:16,543,541...16,625,304
Ensembl chr 7:16,569,086...16,624,085 		JBrowse link
laminin-3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LAMA3 laminin subunit alpha 3 ISO RGD PMID:8923212 RGD:633107 NCBI chr 7:64,405,719...64,654,910
Ensembl chr 7:64,406,082...64,655,268 		JBrowse link
G LAMB2 laminin subunit beta 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
laminin-5 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA3 laminin subunit alpha 3 part_of IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 7:64,405,719...64,654,910
Ensembl chr 7:64,406,082...64,655,268 		JBrowse link
G LAMA5 laminin subunit alpha 5 ISO RGD PMID:9417868 RGD:633095 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LAMB3 laminin subunit beta 3 part_of ISO (MGI:1095193|PMID:9264260) MGI PMID:9264260 MGI:1095193 NCBI chr 7:8,272,326...8,313,322
Ensembl chr 7:8,272,736...8,310,474 		JBrowse link
G LAMC2 laminin subunit gamma 2 part_of ISO (MGI:1095193|PMID:9264260) MGI PMID:9264260 MGI:1095193 NCBI chr 7:16,543,541...16,625,304
Ensembl chr 7:16,569,086...16,624,085 		JBrowse link
laminin-8 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
matrilin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MATN2 matrilin 2 located_in ISO (MGI:1336568|PMID:10224097) ComplexPortal PMID:10224097 MGI:1336568 NCBI chr13:149,108...296,005
Ensembl chr13:149,095...295,994 		JBrowse link
G MATN3 matrilin 3 located_in
part_of		 ISO
IEA		 (MGI:1353153|PMID:10660556) ComplexPortal
Ensembl
Ensembl		 PMID:10660556 GO_REF:0000107 MGI:1353153 NCBI chr17:15,037,175...15,054,451
Ensembl chr17:15,037,995...15,054,436 		JBrowse link
G MATN4 matrilin 4 located_in ISO (MGI:1934728|PMID:11279097) ComplexPortal PMID:11279097 MGI:1934728 NCBI chr24:32,601,175...32,614,109
Ensembl chr24:32,599,508...32,613,872 		JBrowse link
microfibril term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 located_in ISO (PMID:21402694) UniProt PMID:21402694 NCBI chr20:53,090,819...53,110,533
Ensembl chr20:53,090,800...53,108,493 		JBrowse link
G ADAMTSL5 ADAMTS like 5 located_in ISO (PMID:23010571) UniProt PMID:23010571 NCBI chr20:57,351,242...57,357,934
Ensembl chr20:57,351,575...57,357,520 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in ISO (MGI:3709425|PMID:17324935) UniProt PMID:17324935 MGI:3709425 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107 		JBrowse link
G FBN1 fibrillin 1 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FBN2 fibrillin 2 located_in IEA UniProt
Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G FBN3 fibrillin 3 located_in IEA UniProt
UniProt		 GO_REF:0000117 NCBI chr20:52,723,995...52,777,319
Ensembl chr20:52,724,651...52,776,884 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:26,129,528...26,521,782
Ensembl chr17:26,130,781...26,521,779 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,124,109...113,152,283
Ensembl chr 1:113,124,109...113,150,442 		JBrowse link
G MFAP1 microfibril associated protein 1 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr30:10,545,987...10,559,507
Ensembl chr30:10,546,369...10,559,414 		JBrowse link
G MFAP2 microfibril associated protein 2 part_of
located_in
is_active_in		 ISO
IEA
IBA		 (PMID:24353434)
(PMID:21873635)		 CACAO
Ensembl
InterPro
InterPro
GO_Central		 PMID:21873635 PMID:24353434 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:81,217,197...81,223,726
Ensembl chr 2:81,220,431...81,224,243 		JBrowse link
G MFAP4 microfibril associated protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,828,548...40,831,757
Ensembl chr 5:40,828,282...40,831,495 		JBrowse link
G MFAP5 microfibril associated protein 5 located_in
is_active_in		 IEA
IBA		 (PMID:21873635) InterPro
InterPro
GO_Central		 PMID:21873635 GO_REF:0000002 NCBI chr27:37,028,518...37,042,657
Ensembl chr27:37,028,037...37,040,592 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr30:35,156,926...35,358,673
Ensembl chr30:35,156,981...35,353,767 		JBrowse link
multimerin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMRN1 multimerin 1 located_in
part_of		 ISO
IEA		 (PMID:9454761) ComplexPortal
Ensembl		 PMID:9454761 GO_REF:0000107 NCBI chr32:13,111,043...13,184,681
Ensembl chr32:13,110,969...13,184,649 		JBrowse link
perineuronal net term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan is_active_in ISO
IBA		 (PMID:21873635) RGD
GO_Central		 PMID:18364019 PMID:21873635 RGD:2315810 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G BCAN brevican located_in ISO
IEA		 MMO:0000669 RGD
Ensembl		 PMID:16644727 GO_REF:0000107 RGD:9589827 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:43,932,364...43,940,438
Ensembl chr20:43,933,769...43,938,262 		JBrowse link
G NCAN neurocan ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 located_in ISO
IEA		 RGD
Ensembl		 PMID:16644727 GO_REF:0000107 RGD:9589827 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G TNR tenascin R located_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
G VCAN versican ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 3:24,127,293...24,238,859
Ensembl chr 3:24,119,181...24,239,192 		JBrowse link
perisynaptic extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan is_active_in
located_in		 ISO
IEA		 (MGI:6189263|PMID:27615741) SynGO
Ensembl		 PMID:27615741 GO_REF:0000107 MGI:6189263 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G BCAN brevican is_active_in ISO PMID:16503162
PMID:10414531		 SynGO PMID:10414531 PMID:16503162 RGD:13702202 RGD:13702210 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G NCAN neurocan is_active_in ISO (MGI:6162908|PMID:29670169), (MGI:6763867|PMID:30356641) SynGO PMID:29670169 PMID:30356641 MGI:6162908 MGI:6763867 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886 		JBrowse link
G TNC tenascin C located_in
is_active_in		 IEA
ISO		 (MGI:6189245|PMID:16452087) Ensembl
Ensembl
SynGO		 PMID:16452087 GO_REF:0000107 MGI:6189245 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G TNR tenascin R is_active_in ISO PMID:11598921 SynGO PMID:11598921 RGD:13702357 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
tenascin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNC tenascin C located_in
part_of		 ISO
IEA		 (MGI:3028459|PMID:14709716) ComplexPortal
Ensembl
Ensembl		 PMID:14709716 GO_REF:0000107 MGI:3028459 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G TNN tenascin N located_in
part_of		 ISO
IEA		 (PMID:17909022)
(MGI:3028459|PMID:14709716)		 ComplexPortal
Ensembl		 PMID:14709716 PMID:17909022 GO_REF:0000107 MGI:3028459 NCBI chr 7:24,246,481...24,342,686
Ensembl chr 7:24,230,930...24,308,520 		JBrowse link
G TNR tenascin R part_of
located_in		 IEA
ISO		 (MGI:6828676|PMID:2477380) Ensembl
Ensembl
ComplexPortal		 PMID:2477380 GO_REF:0000107 MGI:6828676 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
transforming growth factor beta complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 located_in ISO (PMID:8679613)
(MGI:3821409|PMID:19022904)		 ComplexPortal PMID:8679613 PMID:19022904 MGI:3821409 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TGFB2 transforming growth factor beta 2 located_in ISO (PMID:18243111) ComplexPortal PMID:18243111 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGFB3 transforming growth factor beta 3 located_in ISO (PMID:8819159) ComplexPortal PMID:8819159 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17128
    cellular anatomical entity 16744
      external encapsulating structure 328
        extracellular matrix 326
          Ubisch body 0
          adhesive extracellular matrix 0
          biofilm matrix + 0
          chitin-based extracellular matrix 0
          collagen-containing extracellular matrix + 252
          egg coat + 5
          elastic fiber 5
          fibronectin fibril 0
          microfibril 13
          middle lamella 0
          organomineral extracellular matrix 0
          pollen coat 0
          thrombospondin complex 0
Path 2
Term Annotations click to browse term
  cellular_component 17128
    cellular anatomical entity 16744
      cell periphery 4772
        external encapsulating structure 328
          extracellular matrix 326
            Ubisch body 0
            adhesive extracellular matrix 0
            biofilm matrix + 0
            chitin-based extracellular matrix 0
            collagen-containing extracellular matrix + 252
            egg coat + 5
            elastic fiber 5
            fibronectin fibril 0
            microfibril 13
            middle lamella 0
            organomineral extracellular matrix 0
            pollen coat 0
            thrombospondin complex 0
paths to the root