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ONTOLOGY REPORT - ANNOTATIONS


Term:extracellular matrix
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Accession:GO:0031012 term browser browse the term
Definition:A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues.
Synonyms:exact_synonym: proteinaceous extracellular matrix
 narrow_synonym: matrisome
 alt_id: GO:0005578
 xref: NIF_Subcellular:nlx_subcell_20090513;   Wikipedia:Extracellular_matrix


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extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006030.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:214,664,537...214,693,043 JBrowse link
G AABR07006032.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:214,727,416...214,741,252 JBrowse link
G AABR07006033.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:214,747,625...214,756,309 JBrowse link
G AABR07015881.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:82,867,946...82,869,792 JBrowse link
G AABR07034632.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:81,707,804...81,735,592 JBrowse link
G AABR07043892.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:46,164,123...46,167,950 JBrowse link
G AABR07047872.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:51,466,367...51,468,425 JBrowse link
G AABR07049085.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:104,362,971...104,753,863 JBrowse link
G AABR07069011.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:5,199,426...5,202,360 JBrowse link
G Abi3bp ABI family member 3 binding protein ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G AC096317.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:262,023,406...262,047,332 JBrowse link
G Acan aggrecan IBA
ISO
PMID:21873635
(MGI:2679405|PMID:14620382), (MGI:3767479|PMID:16079159)
RGD PMID:14620382, PMID:16079159, PMID:21873635 MGI:2679405, MGI:3767479, RGD:13792537 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IBA
ISO
PMID:21873635
(MGI:1335998|PMID:9593739), (MGI:2678858|PMID:12907688)
RGD PMID:9593739, PMID:12907688, PMID:21873635 MGI:1335998, MGI:2678858, RGD:13792537 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:18,409,147...18,439,012
Ensembl chr 7:18,409,147...18,439,012
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:61,039,072...61,340,687
Ensembl chr 2:61,039,053...61,340,697
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:30,812,319...30,888,936
Ensembl chr20:30,812,353...30,888,751
JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:31,977,001...32,000,378
Ensembl chr 8:31,977,001...32,000,378
JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:35,067,268...35,200,530
Ensembl chr 1:35,067,490...35,198,939
JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:127,802,872...128,126,764
Ensembl chr 1:127,802,978...128,124,171
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:46,005,055...46,167,912
Ensembl chr19:46,005,277...46,101,250
JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:53,915,807...54,099,856
Ensembl chr18:53,915,807...54,099,120
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 IBA
ISO
PMID:21873635
(MGI:3621082|PMID:16556917)
RGD PMID:16556917, PMID:21873635 MGI:3621082, RGD:13792537 NCBI chr10:36,098,051...36,304,416
Ensembl chr10:36,098,051...36,304,409
JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:135,465,021...135,630,941
Ensembl chr 7:135,466,884...135,630,654
JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:19,866,278...20,072,896
Ensembl chr14:19,866,408...20,070,994
JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:89,622,996...89,632,485
Ensembl chr13:89,622,632...89,634,419
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:25,411,174...25,456,639
Ensembl chr11:25,410,975...25,456,836
JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,374,142...34,589,676
Ensembl chr 2:34,374,158...34,586,755
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:97,535,777...97,575,661
Ensembl chr 8:97,535,777...97,575,655
JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:32,017,684...32,037,529
Ensembl chr 8:32,018,560...32,037,531
JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 ISO
IBA
(PMID:12514189)
PMID:21873635
RGD PMID:12514189, PMID:21873635 RGD:13792537 NCBI chr 4:124,660,254...124,860,997
Ensembl chr 4:124,660,262...124,858,250
JBrowse link
G Adamtsl2 ADAMTS-like 2 IBA
ISO
PMID:21873635
(MGI:3720398|PMID:17509843)
RGD PMID:17509843, PMID:21873635 MGI:3720398, RGD:13792537 NCBI chr 3:5,624,473...5,654,890
Ensembl chr 3:5,624,506...5,654,910
JBrowse link
G Adamtsl3 ADAMTS-like 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,238,958...144,561,065
Ensembl chr 1:144,239,020...144,561,247
JBrowse link
G Adamtsl4 ADAMTS-like 4 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 2:197,803,572...197,815,058
Ensembl chr 2:197,803,584...197,814,808
JBrowse link
G Adamtsl5 ADAMTS-like 5 ISO
IBA
(PMID:23010571)
(MGI:5466434|PMID:23010571)
PMID:21873635
RGD PMID:23010571, PMID:21873635 MGI:5466434, RGD:13792537 NCBI chr 7:12,228,706...12,237,382
Ensembl chr 7:12,229,379...12,234,576
JBrowse link
G Agrn agrin TAS RGD PMID:15711988 RGD:1578369 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Alpl alkaline phosphatase, biomineralization associated ISO (MGI:5304258|PMID:19874193) RGD PMID:19874193 MGI:5304258 NCBI chr 5:156,086,496...156,141,513
Ensembl chr 5:156,086,497...156,141,537
JBrowse link
G Amelx amelogenin, X-linked IDA RGD PMID:12667550 RGD:1599089 NCBI chr  X:26,439,197...26,450,495
Ensembl chr  X:26,439,197...26,450,495
JBrowse link
G Amtn amelotin IDA
ISO
IBA
PMID:16787391
(MGI:3617591|PMID:16304441)
PMID:21873635
RGD PMID:16304441, PMID:16787391, PMID:21873635 MGI:3617591, RGD:2304068, RGD:13792537 NCBI chr14:21,282,488...21,301,966
Ensembl chr14:21,286,510...21,299,068
JBrowse link
G Apoe apolipoprotein E ISS
ISO
IEA
GO_REF:0000024
(PMID:9488694)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9488694 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Aspn asporin ISO (PMID:17827158)
(MGI:1933522|PMID:11152692)
RGD PMID:11152692, PMID:17827158 MGI:1933522 NCBI chr17:14,655,958...14,681,355
Ensembl chr17:14,656,009...14,679,409
JBrowse link
G Bcan brevican IEA
ISO
IBA
GO_REF:0000107
(MGI:3836851|PMID:19141078)
PMID:21873635
Ensembl
RGD
PMID:19141078, PMID:21873635 GO_REF:0000107, MGI:3836851, RGD:13792537 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Bgn biglycan ISO (MGI:3665360|PMID:16810681), (MGI:5588521|PMID:23900597) RGD PMID:16810681, PMID:23900597 MGI:3665360, MGI:5588521 NCBI chr  X:157,319,042...157,331,204
Ensembl chr  X:157,319,046...157,331,204
JBrowse link
G Bmper BMP-binding endothelial regulator IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:24,369,916...24,615,484
Ensembl chr 8:24,369,916...24,615,479
JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 ISO
IEA
(PMID:21778431)
GO_REF:0000107
RGD
Ensembl
PMID:21778431 GO_REF:0000107 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863
JBrowse link
G Ccdc80 coiled-coil domain containing 80 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:60,645,660...60,679,249
Ensembl chr11:60,645,086...60,679,555
JBrowse link
G Ccn1 cellular communication network factor 1 TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:11897702, PMID:21873635 RGD:727633, RGD:13792537 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn2 cellular communication network factor 2 IBA
ISO
PMID:21873635
(MGI:707922|PMID:9184077)
RGD PMID:9184077, PMID:21873635 MGI:707922, RGD:13792537 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Ccn3 cellular communication network factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:94,375,134...94,382,154
Ensembl chr 7:94,375,020...94,383,024
JBrowse link
G Ccn4 cellular communication network factor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Ccn5 cellular communication network factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,207,969...160,219,316
Ensembl chr 3:160,207,913...160,219,331
JBrowse link
G Ccn6 cellular communication network factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,237,491...44,255,064
Ensembl chr20:44,237,491...44,255,064
JBrowse link
G Cd180 CD180 molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:32,820,275...32,833,223
Ensembl chr 2:32,820,322...32,833,125
JBrowse link
G Chad chondroadherin TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:1846945, PMID:21873635 RGD:69816, RGD:13792537 NCBI chr10:82,290,296...82,296,146
Ensembl chr10:82,292,110...82,296,651
JBrowse link
G Chadl chondroadherin-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:122,915,847...122,929,127
Ensembl chr 7:122,922,022...122,926,336
JBrowse link
G Coch cochlin ISO (MGI:5525040|PMID:23684986), (MGI:5526989|PMID:11709536) RGD PMID:11709536, PMID:23684986 MGI:5525040, MGI:5526989 NCBI chr 6:72,359,702...72,373,710
Ensembl chr 6:72,359,791...72,373,695
JBrowse link
G Col10a1 collagen type X alpha 1 chain IBA
ISO
PMID:21873635
(MGI:1195388|PMID:9449075), (MGI:5315238|PMID:22206015)
RGD PMID:9449075, PMID:22206015, PMID:21873635 MGI:1195388, MGI:5315238, RGD:13792537 NCBI chr20:41,180,295...41,190,664
Ensembl chr20:41,184,287...41,189,633
JBrowse link
G Col11a1 collagen type XI alpha 1 chain IBA
ISO
PMID:21873635
(MGI:3694610|PMID:17029294), (MGI:5605227|PMID:24735995)
RGD PMID:17029294, PMID:24735995, PMID:21873635 MGI:3694610, MGI:5605227, RGD:13792537 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col11a2 collagen type XI alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:31,456,502...31,598,360
Ensembl chr20:31,456,852...31,598,118
JBrowse link
G Col15a1 collagen type XV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col16a1 collagen type XVI alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
JBrowse link
G Col17a1 collagen type XVII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:267,416,681...267,465,049
Ensembl chr 1:267,417,459...267,463,705
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:30,508,003...30,864,836
Ensembl chr 9:30,515,089...30,844,199
JBrowse link
G Col1a1 collagen type I alpha 1 chain IBA
ISO
PMID:21873635
(MGI:1860741|PMID:10878613), (MGI:3694610|PMID:17029294), (MGI:74938|PMID:7629088), (MGI:75907|PMID:7589890), (MGI:76515|PMID:7573384), (MGI:77581|PMID:8984825), (MGI:80427|PMID:2209468), (MGI:83649|PMID:8906420)
RGD PMID:2209468, PMID:7573384, PMID:7589890, PMID:7629088, PMID:8906420, PMID:8984825, PMID:10878613, PMID:17029294, PMID:21873635 MGI:1860741, MGI:3694610, MGI:74938, MGI:75907, MGI:76515, MGI:77581, MGI:80427, MGI:83649, RGD:13792537 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col1a2 collagen type I alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:31,534,225...31,569,152
Ensembl chr 4:31,534,225...31,569,151
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,014,896...113,251,165
Ensembl chr 7:113,015,747...113,228,439
JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:34,846,618...34,934,991
Ensembl chr10:34,903,343...34,933,539
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,200,686...251,436,254
Ensembl chr 2:251,200,686...251,434,932
JBrowse link
G Col25a1 collagen type XXV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,515,364...235,705,448
Ensembl chr 2:235,596,123...235,715,057
JBrowse link
G Col26a1 collagen type XXVI alpha 1 chain ISO (MGI:2386800|PMID:12221002) RGD PMID:12221002 MGI:2386800 NCBI chr12:22,834,866...22,980,603
Ensembl chr12:22,835,019...22,980,603
JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:79,054,004...79,172,442
Ensembl chr 5:79,055,521...79,170,765
JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:34,048,074...34,198,558
Ensembl chr 4:34,048,533...34,194,764
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO
IBA
(MGI:1195388|PMID:9449075), (MGI:3767479|PMID:16079159), (MGI:5051994|PMID:21624478), (MGI:5315238|PMID:22206015), (MGI:5523731|PMID:24191021), (MGI:5588521|PMID:23900597), (MGI:79702|PMID:1879364)
PMID:21873635
RGD PMID:1879364, PMID:9449075, PMID:16079159, PMID:21624478, PMID:22206015, PMID:23900597, PMID:24191021, PMID:21873635 MGI:1195388, MGI:3767479, MGI:5051994, MGI:5315238, MGI:5523731, MGI:5588521, MGI:79702, RGD:11556225, RGD:13792537 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO
IBA
(MGI:1328524|PMID:10022501), (MGI:77581|PMID:8984825), (MGI:80427|PMID:2209468)
PMID:21873635
RGD PMID:2209468, PMID:8984825, PMID:10022501, PMID:21873635 MGI:1328524, MGI:77581, MGI:80427, RGD:11556224, RGD:13792537 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Col4a1 collagen type IV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Col4a2 collagen type IV alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
JBrowse link
G Col4a3 collagen type IV alpha 3 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,357,528...88,484,735
Ensembl chr 9:88,357,556...88,485,830
JBrowse link
G Col4a4 collagen type IV alpha 4 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,314,763...88,357,183
Ensembl chr 9:88,232,455...88,357,182
JBrowse link
G Col4a5 collagen type IV alpha 5 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:112,769,595...112,983,720
Ensembl chr  X:112,769,645...112,983,685
JBrowse link
G Col4a6 collagen type IV alpha 6 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:112,405,647...112,768,337
Ensembl chr  X:112,405,647...112,473,822
JBrowse link
G Col5a1 collagen type V alpha 1 chain IBA
ISO
PMID:21873635
(MGI:3694610|PMID:17029294)
RGD PMID:17029294, PMID:21873635 MGI:3694610, RGD:13792537 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Col5a3 collagen type V alpha 3 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:21,786,324...21,831,751
Ensembl chr 8:21,786,324...21,831,668
JBrowse link
G Col6a1 collagen type VI alpha 1 chain IBA
ISO
PMID:21873635
(MGI:3665360|PMID:16810681), (MGI:82649|PMID:8806434)
RGD PMID:8806434, PMID:16810681, PMID:21873635 MGI:3665360, MGI:82649, RGD:13792537 NCBI chr20:12,657,913...12,676,370
Ensembl chr20:12,658,065...12,675,561
JBrowse link
G Col6a2 collagen type VI alpha 2 chain ISO (MGI:3665360|PMID:16810681), (MGI:82649|PMID:8806434) RGD PMID:8806434, PMID:16810681 MGI:3665360, MGI:82649 NCBI chr20:12,773,472...12,801,179
Ensembl chr20:12,773,427...12,801,180
JBrowse link
G Col6a3 collagen type VI alpha 3 chain ISO (PMID:18400749)
(MGI:3665360|PMID:16810681), (MGI:82649|PMID:8806434)
RGD PMID:8806434, PMID:16810681, PMID:18400749 MGI:3665360, MGI:82649 NCBI chr 9:97,926,784...98,004,643
Ensembl chr 9:97,926,787...98,004,546
JBrowse link
G Col6a5 collagen type VI alpha 5 chain ISO (MGI:5565207|PMID:24563484) RGD PMID:24563484 MGI:5565207 NCBI chr 8:114,527,807...114,632,152
Ensembl chr 8:114,529,016...114,617,466
JBrowse link
G Col6a6 collagen type VI alpha 6 chain ISO (PMID:18400749) RGD PMID:18400749 NCBI chr 8:114,352,130...114,449,993
Ensembl chr 8:114,353,825...114,449,956
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:44,877,690...45,006,203
Ensembl chr11:44,877,859...45,007,891
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:144,308,527...144,335,142
Ensembl chr 5:144,308,611...144,335,172
JBrowse link
G Col9a1 collagen type IX alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Col9a2 collagen type IX alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:139,962,684...139,979,865
Ensembl chr 5:139,963,002...139,979,864
JBrowse link
G Col9a3 collagen type IX alpha 3 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:176,102,287...176,124,839
Ensembl chr 3:176,102,351...176,124,306
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Cpn2 carboxypeptidase N subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:74,057,374...74,067,486
Ensembl chr11:74,057,361...74,067,413
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr19:52,647,038...52,705,118
Ensembl chr19:52,647,070...52,705,131
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IDA PMID:15618538 MGI PMID:15618538 RGD:1547887 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Dcn decorin IDA
ISO
RGD PMID:12840020 RGD:11556225, RGD:728372 NCBI chr 7:38,742,250...38,782,282
Ensembl chr 7:38,742,051...38,782,323
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 IBA
ISO
PMID:21873635
(MGI:3057099|PMID:15452149)
RGD PMID:15452149, PMID:21873635 MGI:3057099, RGD:13792537 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 IDA
ISO
IEA
(MGI:3839047|PMID:19001636)
GO_REF:0000107
RGD
Ensembl
PMID:19001636, PMID:8509401 GO_REF:0000107, MGI:3839047, RGD:728616 NCBI chr14:6,889,851...6,923,961
Ensembl chr14:6,889,856...6,900,733
JBrowse link
G Dspp dentin sialophosphoprotein ISO (MGI:3839047|PMID:19001636), (MGI:5448800|PMID:22798071) RGD PMID:19001636, PMID:22798071 MGI:3839047, MGI:5448800 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Ecm2 extracellular matrix protein 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr17:15,533,760...15,566,403
Ensembl chr17:15,533,972...15,566,332
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:29,430,789...29,488,737
Ensembl chr  X:29,430,831...29,488,739
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:56,503,002...56,681,334
Ensembl chr 2:56,502,807...56,679,955
JBrowse link
G Elfn1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:16,749,340...16,813,838
Ensembl chr12:16,749,374...16,813,838
JBrowse link
G Elfn2 extracellular leucine-rich repeat and fibronectin type III domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:119,889,786...119,897,038
Ensembl chr 7:119,894,066...119,896,925
JBrowse link
G Eln elastin TAS
IDA
RGD PMID:10090127, PMID:18847363 RGD:731206, RGD:9585685 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Emid1 EMI domain containing 1 ISO (MGI:2386800|PMID:12221002) RGD PMID:12221002 MGI:2386800 NCBI chr14:85,357,221...85,400,396
Ensembl chr14:85,357,222...85,398,532
JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO (MGI:3027195|PMID:14701737) RGD PMID:14701737 MGI:3027195 NCBI chr 6:26,821,249...26,829,013
Ensembl chr 6:26,821,255...26,828,972
JBrowse link
G Enam enamelin IBA
ISO
PMID:21873635
(MGI:5647983|PMID:24603688)
RGD PMID:24603688, PMID:21873635 MGI:5647983, RGD:13792537 NCBI chr14:21,194,635...21,219,529
Ensembl chr14:21,194,664...21,219,454
JBrowse link
G Epyc epiphycan ISO (MGI:5644410|PMID:19932218) RGD PMID:19932218 MGI:5644410 NCBI chr 7:38,897,278...38,934,989
Ensembl chr 7:38,897,278...38,934,985
JBrowse link
G Fbln1 fibulin 1 ISO (PMID:2269669) RGD PMID:2269669 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
G Fbln7 fibulin 7 ISO (MGI:6279558|PMID:29730503) RGD PMID:29730503 MGI:6279558 NCBI chr 3:121,407,981...121,441,660
Ensembl chr 3:121,408,146...121,440,787
JBrowse link
G Fbn1 fibrillin 1 ISO
IBA
(PMID:3536967)
PMID:21873635
RGD PMID:3536967, PMID:21873635 RGD:13792537 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fbn2 fibrillin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fcgbp Fc fragment of IgG binding protein IBA
ISO
PMID:21873635
(MGI:3851664|PMID:19432394)
RGD PMID:19432394, PMID:21873635 MGI:3851664, RGD:13792537 NCBI chr 1:85,003,280...85,046,840
Ensembl chr 1:85,003,280...85,046,840
JBrowse link
G Fcgbpl1 Fc fragment of IgG binding protein-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:85,058,541...85,096,492
Ensembl chr 1:85,058,548...85,096,346
JBrowse link
G Fgf1 fibroblast growth factor 1 ISO (MGI:3525426|PMID:15381701) RGD PMID:15381701 MGI:3525426 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fn1 fibronectin 1 TAS
ISO
(MGI:1101335|PMID:9421166), (MGI:2149189|PMID:11511678), (MGI:3577694|PMID:15728191), (MGI:3628676|PMID:15065125), (MGI:3806197|PMID:18559979), (MGI:5440773|PMID:22821713), (MGI:5462513|PMID:22984613), (MGI:80427|PMID:2209468)
(PMID:26571399)
RGD PMID:2209468, PMID:9421166, PMID:11511678, PMID:15065125, PMID:15728191, PMID:18559979, PMID:22821713, PMID:22984613, PMID:26571399, PMID:11768240 MGI:1101335, MGI:2149189, MGI:3577694, MGI:3628676, MGI:3806197, MGI:5440773, MGI:5462513, MGI:80427, RGD:11556221, RGD:729934 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Gfod2 glucose-fructose oxidoreductase domain containing 2 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr19:37,678,488...37,725,623
Ensembl chr19:37,682,734...37,725,623
JBrowse link
G Glg1 golgi glycoprotein 1 IEA
ISO
GO_REF:0000107
(MGI:4829577|PMID:20530870)
Ensembl
RGD
PMID:20530870 GO_REF:0000107, MGI:4829577 NCBI chr19:42,983,879...43,088,074
Ensembl chr19:42,983,869...43,090,841
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,260,680...57,263,546
Ensembl chr10:57,260,680...57,263,546
JBrowse link
G Gpc1 glypican 1 ISS
ISO
GO_REF:0000024
(MGI:4461098|PMID:20100867)
UniProt
RGD
PMID:20100867 GO_REF:0000024, MGI:4461098 NCBI chr 9:99,998,275...100,026,818
Ensembl chr 9:99,998,275...100,026,818
JBrowse link
G Gpc2 glypican 2 TAS RGD PMID:8294498 RGD:728608 NCBI chr12:19,593,041...19,599,374
Ensembl chr12:19,593,041...19,599,374
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISS
ISO
IBA
GO_REF:0000024
(MGI:3583476|PMID:15946906)
PMID:21873635
UniProt
RGD
PMID:15946906, PMID:21873635 GO_REF:0000024, MGI:3583476, RGD:13792537 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 IBA
ISO
PMID:21873635
(MGI:2679405|PMID:14620382)
RGD PMID:14620382, PMID:21873635 MGI:2679405, RGD:13792537 NCBI chr 2:18,354,542...18,419,077
Ensembl chr 2:18,354,542...18,419,071
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 IEA
ISO
IBA
GO_REF:0000107
(MGI:4437139|PMID:20181608)
PMID:21873635
Ensembl
RGD
PMID:20181608, PMID:21873635 GO_REF:0000107, MGI:4437139, RGD:13792537 NCBI chr 2:187,395,104...187,402,076
Ensembl chr 2:187,396,349...187,401,786
JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:140,827,279...140,845,386
Ensembl chr 1:140,827,295...140,835,151
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:21,081,377...21,089,508
Ensembl chr16:21,081,377...21,089,508
JBrowse link
G Hpse heparanase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Hpse2 heparanase 2 (inactive) ISO (PMID:20576607) RGD PMID:20576607 NCBI chr 1:262,020,903...263,138,299 JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:82,924,699...83,048,465
Ensembl chr 3:82,924,687...83,048,435
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO (MGI:1349497|PMID:10579729), (MGI:3525426|PMID:15381701), (MGI:3640625|PMID:16407285), (MGI:5470500|PMID:23217742) RGD PMID:10579729, PMID:15381701, PMID:16407285, PMID:23217742 MGI:1349497, MGI:3525426, MGI:3640625, MGI:5470500 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Ibsp integrin-binding sialoprotein TAS RGD PMID:12112014 RGD:727390 NCBI chr14:6,801,200...6,813,987
Ensembl chr14:6,801,204...6,813,945
JBrowse link
G Igfals insulin-like growth factor binding protein, acid labile subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,240,308...14,243,554
Ensembl chr10:14,240,219...14,243,597
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:2149274|PMID:11476578) RGD PMID:11476578 MGI:2149274 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 ISO (MGI:71218|PMID:7883081) RGD PMID:7883081 MGI:71218 NCBI chr 9:47,133,483...47,184,316
Ensembl chr 9:47,134,034...47,182,170
JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr16:7,012,376...7,026,542
Ensembl chr16:7,012,354...7,026,540
JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:264,827,739...264,831,152
Ensembl chr 1:264,827,739...264,831,151
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:2179164|PMID:11984530), (MGI:3028398|PMID:14697343), (MGI:3624056|PMID:16554364), (MGI:3628676|PMID:15065125), (MGI:75907|PMID:7589890), (MGI:80991|PMID:1907584) RGD PMID:1907584, PMID:7589890, PMID:11984530, PMID:14697343, PMID:15065125, PMID:16554364 MGI:2179164, MGI:3028398, MGI:3624056, MGI:3628676, MGI:75907, MGI:80991 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:3624056|PMID:16554364) RGD PMID:16554364 MGI:3624056 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb1 laminin subunit beta 1 ISO (MGI:3624056|PMID:16554364) RGD PMID:16554364 MGI:3624056 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamc1 laminin subunit gamma 1 IDA RGD PMID:8648916 RGD:633159 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
G Lamc2 laminin subunit gamma 2 IDA RGD PMID:9417868 RGD:633095 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
G Lgals3 galectin 3 ISO (MGI:3589495|PMID:15800063) RGD PMID:15800063 MGI:3589495 NCBI chr15:24,153,602...24,165,537
Ensembl chr15:24,141,651...24,165,537
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:61,272,125...61,455,480
Ensembl chr 8:61,274,017...61,290,240
JBrowse link
G Lingo3 leucine rich repeat and Ig domain containing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,737,293...11,746,703
Ensembl chr 7:11,737,293...11,746,703
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:195,617,044...195,643,502
Ensembl chr 2:195,617,044...195,643,502
JBrowse link
G LOC100909913 norrin-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:6,258,264...6,282,760
Ensembl chr  X:6,273,733...6,281,789
JBrowse link
G LOC100910790 spondin-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:82,863,639...82,889,642
Ensembl chr14:82,818,663...82,824,599
JBrowse link
G LOC100910978 extracellular matrix protein 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:14,695,293...14,719,087
Ensembl chr17:14,696,308...14,717,420
JBrowse link
G LOC100911572 collagen alpha-3(IV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:90,856,897...90,877,771
Ensembl chr 9:90,857,308...90,874,704
JBrowse link
G LOC102546467 HERV-H LTR-associating protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:106,442,364...106,485,324
Ensembl chr 7:106,441,257...106,465,830
JBrowse link
G LOC103693323 collagen alpha-1(XXIII) chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,741,139...37,031,200
Ensembl chr10:36,741,434...37,028,367
JBrowse link
G LOC103694864 matrix metalloproteinase-28-like IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC108348074 collagen alpha-1(XV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:64,475,618...64,543,510 JBrowse link
G Lox lysyl oxidase IDA
ISO
PMID:16251195
(MGI:1101283|PMID:9382709), (MGI:3828240|PMID:18835815), (MGI:5634219|PMID:25715398)
RGD PMID:9382709, PMID:18835815, PMID:25715398, PMID:16251195 MGI:1101283, MGI:3828240, MGI:5634219, RGD:8553592 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Loxl1 lysyl oxidase-like 1 IDA
ISO
PMID:16251195
(MGI:1328524|PMID:10022501)
RGD PMID:10022501, PMID:16251195 MGI:1328524, RGD:8553592 NCBI chr 8:63,067,757...63,092,124
Ensembl chr 8:63,067,300...63,092,009
JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:126,615,998...126,717,434
Ensembl chr 4:126,617,244...126,644,895
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:206,928,708...206,997,915
Ensembl chr 2:206,931,204...206,997,519
JBrowse link
G Lrrc17 leucine rich repeat containing 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,108,184...10,138,652
Ensembl chr 4:10,108,192...10,138,652
JBrowse link
G Lrrc3b leucine rich repeat containing 3B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:11,221,161...11,299,563
Ensembl chr15:11,298,478...11,299,257
JBrowse link
G Lrrc66 leucine rich repeat containing 66 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:37,128,715...37,153,890
Ensembl chr14:37,130,743...37,153,898
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:139,633,310...139,679,730
Ensembl chr 4:139,670,092...139,673,143
JBrowse link
G Lrrn2 leucine rich repeat neuronal 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:49,660,356...49,730,275
Ensembl chr13:49,660,356...49,730,275
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:61,374,328...61,405,195
Ensembl chr 6:61,374,328...61,405,195
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO (PMID:8617200)
(MGI:85085|PMID:9008713)
RGD PMID:8617200, PMID:9008713 MGI:85085 NCBI chr 6:21,203,502...21,600,441
Ensembl chr 6:21,203,502...21,600,451
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 ISO (PMID:9660815)
(MGI:2386340|PMID:12208849)
RGD PMID:9660815, PMID:12208849 MGI:2386340 NCBI chr 1:84,118,046...84,152,095
Ensembl chr 1:84,118,046...84,150,084
JBrowse link
G Lum lumican IDA
ISO
(MGI:2446994|PMID:12128073) RGD PMID:12128073, PMID:11348051 MGI:2446994, RGD:1582122 NCBI chr 7:38,820,058...38,826,862
Ensembl chr 7:38,819,771...38,826,862
JBrowse link
G Mamdc2 MAM domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:241,071,110...241,223,798
Ensembl chr 1:241,072,072...241,155,537
JBrowse link
G Matn1 matrilin 1 ISO (MGI:2157579|PMID:11102754) RGD PMID:11102754 MGI:2157579 NCBI chr 5:149,077,412...149,086,957
Ensembl chr 5:149,077,412...149,086,957
JBrowse link
G Matn2 matrilin 2 ISO (MGI:2157579|PMID:11102754) RGD PMID:11102754 MGI:2157579 NCBI chr 7:72,985,832...73,210,093
Ensembl chr 7:72,985,495...73,207,695
JBrowse link
G Matn3 matrilin 3 ISO (MGI:2157579|PMID:11102754) RGD PMID:11102754 MGI:2157579 NCBI chr 6:34,071,428...34,091,048
Ensembl chr 6:34,071,428...34,091,048
JBrowse link
G Mepe matrix extracellular phosphoglycoprotein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:6,782,011...6,793,561
Ensembl chr14:6,782,012...6,793,558
JBrowse link
G Mfap5 microfibril associated protein 5 ISO (MGI:3698678|PMID:17099216) RGD PMID:17099216 MGI:3698678 NCBI chr 4:155,313,671...155,336,228
Ensembl chr 4:155,313,671...155,336,228
JBrowse link
G Mgp matrix Gla protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp10 matrix metallopeptidase 10 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,734,348...5,742,243
Ensembl chr 8:5,734,348...5,742,243
JBrowse link
G Mmp11 matrix metallopeptidase 11 ISO (PMID:18622425) RGD PMID:18622425 NCBI chr20:13,670,051...13,678,834
Ensembl chr20:13,670,066...13,678,089
JBrowse link
G Mmp12 matrix metallopeptidase 12 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Mmp14 matrix metallopeptidase 14 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp15 matrix metallopeptidase 15 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:10,079,881...10,101,380
Ensembl chr19:10,079,765...10,101,451
JBrowse link
G Mmp16 matrix metallopeptidase 16 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Mmp17 matrix metallopeptidase 17 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:30,353,874...30,356,526
NCBI chr12:30,701,900...30,728,683
Ensembl chr12:30,702,571...30,728,655
JBrowse link
G Mmp19 matrix metallopeptidase 19 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:3,216,392...3,224,202
Ensembl chr 7:3,216,497...3,224,201
JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,622,657...5,688,762
Ensembl chr 8:5,623,198...5,631,014
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp20 matrix metallopeptidase 20 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,823,147...5,875,555
Ensembl chr 8:5,833,359...5,875,232
JBrowse link
G Mmp21 matrix metallopeptidase 21 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:205,745,119...205,750,786
Ensembl chr 1:205,745,119...205,750,786
JBrowse link
G Mmp23 matrix metallopeptidase 23 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:173,078,811...173,082,834
Ensembl chr 5:173,078,590...173,081,839
JBrowse link
G Mmp24 matrix metallopeptidase 24 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:151,307,309...151,355,401
Ensembl chr 3:151,310,598...151,355,401
JBrowse link
G Mmp27 matrix metallopeptidase 27 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,790,019...5,799,938
Ensembl chr 8:5,790,034...5,800,342
JBrowse link
G Mmp28 matrix metallopeptidase 28 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:70,660,691...70,681,672
Ensembl chr10:70,660,691...70,681,672
JBrowse link
G Mmp3 matrix metallopeptidase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,676,608...5,698,579
Ensembl chr 8:5,676,665...5,698,579
JBrowse link
G Mmp7 matrix metallopeptidase 7 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
G Mmp8 matrix metallopeptidase 8 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:5,768,808...5,777,741
Ensembl chr 8:5,768,811...5,778,702
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming IBA
ISO
PMID:21873635
(MGI:3052756|PMID:11352827), (MGI:3851673|PMID:19411636)
RGD PMID:11352827, PMID:19411636, PMID:21873635 MGI:3052756, MGI:3851673, RGD:13792537 NCBI chr 1:214,663,929...214,693,197 JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,778,459...214,811,237
Ensembl chr 1:214,778,496...214,810,720
JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,608,453...214,630,524
Ensembl chr 1:214,608,704...214,629,938
JBrowse link
G Nav2 neuron navigator 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:104,575,765...104,941,554
Ensembl chr 1:104,576,589...104,941,552
JBrowse link
G Ncan neurocan IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:21,050,243...21,076,707
Ensembl chr16:21,050,243...21,076,707
JBrowse link
G Ndnf neuron-derived neurotrophic factor ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Ndp norrin cystine knot growth factor NDP IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:6,791,090...6,815,586
Ensembl chr  X:6,791,136...6,815,583
Ensembl chr  X:6,791,136...6,815,583
JBrowse link
G Nid1 nidogen 1 ISO (MGI:3624079|PMID:16618944) RGD PMID:16618944 MGI:3624079 NCBI chr17:90,553,161...90,627,133
Ensembl chr17:90,553,394...90,627,101
JBrowse link
G Nid2 nidogen 2 ISO (MGI:3624079|PMID:16618944) RGD PMID:16618944 MGI:3624079 NCBI chr15:4,893,999...4,951,893
Ensembl chr15:4,894,213...4,951,917
JBrowse link
G Notch1 notch receptor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch2 notch receptor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Npnt nephronectin ISO UniProtKB:Q8BPT3 (MGI:2137765|PMID:11470831), (MGI:2153230|PMID:11546798) RGD PMID:11470831, PMID:11546798 MGI:2137765, MGI:2153230 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Ntn1 netrin 1 IDA RGD PMID:11356879 RGD:633501 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Nyx nyctalopin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:10,197,547...10,218,583
Ensembl chr  X:10,197,547...10,218,583
JBrowse link
G Oc90 otoconin 90 IBA
ISO
PMID:21873635
(MGI:1328623|PMID:9892667)
RGD PMID:9892667, PMID:21873635 MGI:1328623, RGD:13792537 NCBI chr 7:106,615,859...106,697,089
Ensembl chr 7:106,619,326...106,653,567
JBrowse link
G Olfml2a olfactomedin-like 2A ISO (MGI:3696893|PMID:15836428), (MGI:3807344|PMID:18757743) RGD PMID:15836428, PMID:18757743 MGI:3696893, MGI:3807344 NCBI chr 3:23,223,468...23,259,318
Ensembl chr 3:23,223,479...23,259,321
JBrowse link
G Olfml2b olfactomedin-like 2B ISO (MGI:3696893|PMID:15836428), (MGI:3807344|PMID:18757743) RGD PMID:15836428, PMID:18757743 MGI:3696893, MGI:3807344 NCBI chr13:88,995,301...89,032,487
Ensembl chr13:88,995,316...89,032,487
JBrowse link
G Omd osteomodulin ISO (MGI:3608028|PMID:14673660) RGD PMID:14673660 MGI:3608028 NCBI chr17:15,476,100...15,484,324
Ensembl chr17:15,475,710...15,484,269
JBrowse link
G Optc opticin ISO (PMID:18164633)
(MGI:5462009|PMID:22159013)
RGD PMID:18164633, PMID:22159013 MGI:5462009 NCBI chr13:50,735,509...50,748,908
Ensembl chr13:50,735,599...50,746,354
JBrowse link
G Otog otogelin IBA
ISO
PMID:21873635
(MGI:1101691|PMID:9405633)
RGD PMID:9405633, PMID:21873635 MGI:1101691, RGD:13792537 NCBI chr 1:102,258,124...102,327,201
Ensembl chr 1:102,258,124...102,327,201
JBrowse link
G Otogl otogelin-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:51,768,469...51,935,442
Ensembl chr 7:51,794,173...51,935,142
JBrowse link
G Otol1 otolin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:166,845,543...166,866,513
Ensembl chr 2:166,856,784...166,866,195
JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:107,245,573...107,282,256
Ensembl chr 6:107,245,820...107,276,755
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO (MGI:5304258|PMID:19874193) RGD PMID:19874193 MGI:5304258 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Postn periostin IBA
ISO
PMID:21873635
(MGI:3690184|PMID:10404027), (MGI:5565207|PMID:24563484)
RGD PMID:10404027, PMID:24563484, PMID:21873635 MGI:3690184, MGI:5565207, RGD:13792537 NCBI chr 2:143,656,820...143,688,087
Ensembl chr 2:143,656,793...143,688,087
JBrowse link
G Prelp proline and arginine rich end leucine rich repeat protein TAS RGD PMID:11007795 RGD:727301 NCBI chr13:50,749,526...50,773,934
Ensembl chr13:50,749,514...50,761,355
JBrowse link
G Prss34 protease, serine, 34 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:14,656,812...14,658,569
Ensembl chr10:14,656,812...14,658,569
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 ISO (MGI:2665215|PMID:12700241), (MGI:3836851|PMID:19141078) RGD PMID:12700241, PMID:19141078 MGI:2665215, MGI:3836851 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:3761906 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
G Rarres2 retinoic acid receptor responder 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:78,205,809...78,208,956
Ensembl chr 4:78,205,812...78,208,767
JBrowse link
G Rell2 RELT-like 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr18:31,094,965...31,098,536
Ensembl chr18:31,094,965...31,098,536
JBrowse link
G Reln reelin IEA
ISO
GO_REF:0000107
(MGI:5427748|PMID:22665518)
Ensembl
RGD
PMID:22665518 GO_REF:0000107, MGI:5427748 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,689,608...3,691,164 JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:72,272,814...72,289,310
Ensembl chr 3:72,273,424...72,289,310
JBrowse link
G Scara3 scavenger receptor class A, member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:42,605,505...42,638,409
Ensembl chr15:42,605,473...42,638,392
JBrowse link
G Serac1 serine active site containing 1 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:46,934,499...46,978,264
Ensembl chr 1:46,942,192...46,978,261
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:2149274|PMID:11476578)
Ensembl
RGD
PMID:11476578 GO_REF:0000107, MGI:2149274 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO (MGI:83649|PMID:8906420) RGD PMID:8906420 MGI:83649 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spock3 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 ISO (PMID:11751414) RGD PMID:11751414 NCBI chr16:28,372,067...28,716,762
Ensembl chr16:28,372,411...28,716,885
JBrowse link
G Spon1 spondin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:178,568,777...178,935,715
Ensembl chr 1:178,636,544...178,935,051
JBrowse link
G Spon2 spondin 2 TAS
ISO
IBA
(MGI:2686801|PMID:14691481)
PMID:21873635
RGD PMID:14691481, PMID:10409509, PMID:21873635 MGI:2686801, RGD:1299546, RGD:13792537 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,443,750...72,462,293
Ensembl chr 1:72,443,758...72,461,547
JBrowse link
G Sspo SCO-spondin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:78,076,695...78,133,676
Ensembl chr 4:78,080,310...78,133,654
JBrowse link
G Tecta tectorin alpha ISO (MGI:86678|PMID:9079715) RGD PMID:9079715 MGI:86678 NCBI chr 8:46,603,728...46,675,658
Ensembl chr 8:46,603,728...46,675,544
JBrowse link
G Tectb tectorin beta ISO (MGI:86678|PMID:9079715) RGD PMID:9079715 MGI:86678 NCBI chr 1:275,957,698...275,976,572
Ensembl chr 1:275,957,698...275,976,572
JBrowse link
G Tfip11 tuftelin interacting protein 11 ISO (MGI:1861343|PMID:10806191) RGD PMID:10806191 MGI:1861343 NCBI chr12:50,320,820...50,333,052
Ensembl chr12:50,320,821...50,333,052
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:2386340|PMID:12208849), (MGI:3828240|PMID:18835815), (MGI:80427|PMID:2209468), (MGI:85085|PMID:9008713) RGD PMID:2209468, PMID:9008713, PMID:12208849, PMID:18835815 MGI:2386340, MGI:3828240, MGI:80427, MGI:85085 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISS
ISO
GO_REF:0000024
(MGI:1934551|PMID:10521784)
AgBase
RGD
PMID:10521784 GO_REF:0000024, MGI:1934551 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbi transforming growth factor, beta induced TAS
ISO
IBA
(MGI:2675543|PMID:12963107)
PMID:21873635
RGD PMID:12963107, PMID:12911551, PMID:21873635 MGI:2675543, RGD:1304421, RGD:13792537 NCBI chr17:8,400,123...8,429,338
Ensembl chr17:8,400,146...8,429,338
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 IDA RGD PMID:10207840 RGD:1579948 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:6341993) RGD PMID:6341993 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs2 thrombospondin 2 ISO (MGI:1860780|PMID:10669089) RGD PMID:10669089 MGI:1860780 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Thbs4 thrombospondin 4 IDA RGD PMID:7490284 RGD:61768 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 ISO (MGI:4453293|PMID:19940141) RGD PMID:19940141 MGI:4453293 NCBI chr 8:64,811,940...65,413,498
Ensembl chr 8:64,817,191...65,003,296
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 IBA
ISO
PMID:21873635
(MGI:2675517|PMID:12950084)
RGD PMID:12950084, PMID:21873635 MGI:2675517, RGD:13792537 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467
JBrowse link
G Tnc tenascin C IDA
ISO
RGD PMID:7519614 RGD:11553836, RGD:11556225, RGD:634489 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B ISO (MGI:86995|PMID:9108485) RGD PMID:9108485 MGI:86995 NCBI chr 7:93,798,580...93,826,586
Ensembl chr 7:93,798,545...93,826,665
JBrowse link
G Tnn tenascin N ISO (MGI:3028459|PMID:14709716) RGD PMID:14709716 MGI:3028459 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tnr tenascin R IDA
ISO
(MGI:3836851|PMID:19141078), (MGI:67553|PMID:7530142) RGD PMID:7530142, PMID:19141078, PMID:9925948 MGI:3836851, MGI:67553, RGD:634496 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link
G Tnxb tenascin XB ISO (MGI:5565207|PMID:24563484), (MGI:70320|PMID:7512972) RGD PMID:7512972, PMID:24563484 MGI:5565207, MGI:70320
G Tril TLR4 interactor with leucine-rich repeats IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:83,967,695...83,972,540
Ensembl chr 4:83,967,696...83,972,540
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated IBA
ISO
PMID:21873635
(MGI:3772275|PMID:17707622), (MGI:3784758|PMID:18156182)
RGD PMID:17707622, PMID:18156182, PMID:21873635 MGI:3772275, MGI:3784758, RGD:13792537 NCBI chr17:77,252,099...77,262,301
Ensembl chr17:77,252,100...77,261,731
JBrowse link
G Vasn vasorin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:11,121,041...11,131,548
Ensembl chr10:11,121,041...11,131,548
JBrowse link
G Vcan versican IBA
ISO
PMID:21873635
(MGI:2679405|PMID:14620382)
RGD PMID:14620382, PMID:21873635 MGI:2679405, RGD:13792537 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842
JBrowse link
G Vit vitrin ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:1,091,817...1,208,888
Ensembl chr 6:1,147,012...1,208,392
JBrowse link
G Vtn vitronectin ISO (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 ISO (MGI:3640625|PMID:16407285), (MGI:3807344|PMID:18757743) RGD PMID:16407285, PMID:18757743 MGI:3640625, MGI:3807344 NCBI chr 5:173,216,737...173,221,923
Ensembl chr 5:173,216,741...173,222,440
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:91,201,141...91,348,219
Ensembl chr14:91,201,730...91,348,219
JBrowse link
G Vwf von Willebrand factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wnt11 Wnt family member 11 ISO (MGI:82099|PMID:8700530) RGD PMID:8700530 MGI:82099 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt3 Wnt family member 3 ISO (MGI:66576|PMID:8167409) RGD PMID:8167409 MGI:66576 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Wnt4 Wnt family member 4 IEA
ISO
GO_REF:0000107
(MGI:66576|PMID:8167409)
Ensembl
RGD
PMID:8167409 GO_REF:0000107, MGI:66576 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
(MGI:66576|PMID:8167409)
Ensembl
RGD
PMID:8167409 GO_REF:0000107, MGI:66576 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt5b Wnt family member 5B ISO (MGI:66576|PMID:8167409) RGD PMID:8167409 MGI:66576 NCBI chr 4:151,500,962...151,516,894
Ensembl chr 4:151,500,957...151,516,894
JBrowse link
G Wnt6 Wnt family member 6 ISO (MGI:66576|PMID:8167409) RGD PMID:8167409 MGI:66576 NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:66576|PMID:8167409) RGD PMID:8167409 MGI:66576 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zp3 zona pellucida glycoprotein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:23,735,225...23,752,734
Ensembl chr12:23,735,223...23,742,190
JBrowse link
basement membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07073181.1 TAS
IBA
PMID:8621634
PMID:21873635
CAFA
GO_Central
PMID:8621634, PMID:21873635 RGD:12793010, RGD:13792537 Ensembl chr 5:155,812,105...155,885,829 JBrowse link
G Acan aggrecan IEA
ISO
GO_REF:0000107
(MGI:3607633|PMID:16061471)
Ensembl
RGD
PMID:16061471 GO_REF:0000107, MGI:3607633 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Ache acetylcholinesterase IEA
ISO
GO_REF:0000107
(MGI:71472|PMID:7885444)
Ensembl
RGD
PMID:7885444 GO_REF:0000107, MGI:71472 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IEA
ISO
GO_REF:0000107
(MGI:3607633|PMID:16061471)
Ensembl
RGD
PMID:16061471 GO_REF:0000107, MGI:3607633 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Agrn agrin IDA
ISO
IEA
ISS
(MGI:1891559|PMID:11018052), (MGI:3807344|PMID:18757743), (MGI:75217|PMID:7670489)
GO_REF:0000107
(PMID:9405491)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:7670489, PMID:9405491, PMID:11018052, PMID:18757743, PMID:15711988 GO_REF:0000024, GO_REF:0000107, MGI:1891559, MGI:3807344, MGI:75217, RGD:11556219, RGD:1578369 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Alb albumin IDA RGD PMID:1723977 RGD:1625719 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Amelx amelogenin, X-linked ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:26,439,197...26,450,495
Ensembl chr  X:26,439,197...26,450,495
JBrowse link
G Amtn amelotin IDA
ISO
IBA
PMID:16787391
(MGI:3696589|PMID:16787391)
PMID:21873635
RGD PMID:16787391, PMID:16787391, PMID:21873635 MGI:3696589, RGD:2304068, RGD:13792537 NCBI chr14:21,282,488...21,301,966
Ensembl chr14:21,286,510...21,299,068
JBrowse link
G Ang angiogenin ISO (PMID:15166501) RGD PMID:15166501 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Anxa2 annexin A2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Atrn attractin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:123,434,409...123,567,922
Ensembl chr 3:123,434,409...123,567,918
JBrowse link
G Atrnl1 attractin like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:278,546,113...279,098,977
Ensembl chr 1:278,557,792...278,815,473
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase colocalizes_with ISO (PMID:18664494)
(MGI:3810856|PMID:18664494)
RGD PMID:18664494 MGI:3810856 NCBI chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
JBrowse link
G Ccdc80 coiled-coil domain containing 80 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:60,645,660...60,679,249
Ensembl chr11:60,645,086...60,679,555
JBrowse link
G Cd151 CD151 molecule (Raph blood group) ISO (PMID:23302890) RGD PMID:23302890 NCBI chr 1:214,446,659...214,450,668
Ensembl chr 1:214,009,784...214,013,765
Ensembl chr 1:214,009,784...214,013,765
JBrowse link
G Col15a1 collagen type XV alpha 1 chain ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO (MGI:2450496|PMID:12588956), (MGI:3054601|PMID:15254016), (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211), (MGI:76276|PMID:7568013) RGD PMID:7568013, PMID:12588956, PMID:15254016, PMID:18757743, PMID:19651211 MGI:2450496, MGI:3054601, MGI:3807344, MGI:4397493, MGI:76276 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain ISO (MGI:3624169|PMID:16330543), (MGI:4868179|PMID:20830809) RGD PMID:16330543, PMID:20830809 MGI:3624169, MGI:4868179 NCBI chr 4:34,048,074...34,198,558
Ensembl chr 4:34,048,533...34,194,764
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
(MGI:1932704|PMID:11273670)
Ensembl
RGD
PMID:11273670 GO_REF:0000107, MGI:1932704 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col4a1 collagen type IV alpha 1 chain IBA
ISO
PMID:21873635
(MGI:2149189|PMID:11511678), (MGI:2157737|PMID:11732842), (MGI:3579951|PMID:15895400), (MGI:3776221|PMID:16041630), (MGI:3807344|PMID:18757743)
RGD PMID:11511678, PMID:11732842, PMID:15895400, PMID:16041630, PMID:18757743, PMID:21873635 MGI:2149189, MGI:2157737, MGI:3579951, MGI:3776221, MGI:3807344, RGD:13792537 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Col4a2 collagen type IV alpha 2 chain ISO (MGI:2157737|PMID:11732842), (MGI:3776221|PMID:16041630), (MGI:3807344|PMID:18757743) RGD PMID:11732842, PMID:16041630, PMID:18757743 MGI:2157737, MGI:3776221, MGI:3807344, RGD:11556219 NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO
IBA
(PMID:10766752)
(MGI:2157737|PMID:11732842), (MGI:3776221|PMID:16041630), (MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:10766752, PMID:11732842, PMID:16041630, PMID:18757743, PMID:21873635 MGI:2157737, MGI:3776221, MGI:3807344, RGD:13792537 NCBI chr 9:88,357,528...88,484,735
Ensembl chr 9:88,357,556...88,485,830
JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO
IBA
(PMID:2211832)
(MGI:1095193|PMID:9264260), (MGI:1347142|PMID:10534397), (MGI:2157737|PMID:11732842), (MGI:3850913|PMID:19275937)
PMID:21873635
RGD PMID:2211832, PMID:9264260, PMID:10534397, PMID:11732842, PMID:19275937, PMID:21873635 MGI:1095193, MGI:1347142, MGI:2157737, MGI:3850913, RGD:13792537 NCBI chr 9:88,314,763...88,357,183
Ensembl chr 9:88,232,455...88,357,182
JBrowse link
G Col4a5 collagen type IV alpha 5 chain IBA
ISO
PMID:21873635
(MGI:1095193|PMID:9264260), (MGI:1347142|PMID:10534397), (MGI:2157737|PMID:11732842), (MGI:3807344|PMID:18757743), (MGI:3850913|PMID:19275937), (MGI:71472|PMID:7885444)
RGD PMID:7885444, PMID:9264260, PMID:10534397, PMID:11732842, PMID:18757743, PMID:19275937, PMID:21873635 MGI:1095193, MGI:1347142, MGI:2157737, MGI:3807344, MGI:3850913, MGI:71472, RGD:13792537 NCBI chr  X:112,769,595...112,983,720
Ensembl chr  X:112,769,645...112,983,685
JBrowse link
G Col4a6 collagen type IV alpha 6 chain ISO (MGI:1347142|PMID:10534397), (MGI:2157737|PMID:11732842), (MGI:3807344|PMID:18757743), (MGI:3850913|PMID:19275937) RGD PMID:10534397, PMID:11732842, PMID:18757743, PMID:19275937 MGI:1347142, MGI:2157737, MGI:3807344, MGI:3850913 NCBI chr  X:112,405,647...112,768,337
Ensembl chr  X:112,405,647...112,473,822
JBrowse link
G Col5a1 collagen type V alpha 1 chain IEA
ISO
GO_REF:0000107
(MGI:3028449|PMID:14676276)
Ensembl
RGD
PMID:14676276 GO_REF:0000107, MGI:3028449 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col6a1 collagen type VI alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:12,657,913...12,676,370
Ensembl chr20:12,658,065...12,675,561
JBrowse link
G Col7a1 collagen type VII alpha 1 chain ISO (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211) RGD PMID:18757743, PMID:19651211 MGI:3807344, MGI:4397493 NCBI chr 8:117,694,441...117,726,844
Ensembl chr 8:117,694,605...117,726,844
JBrowse link
G Col9a1 collagen type IX alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Col9a3 collagen type IX alpha 3 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:176,102,287...176,124,839
Ensembl chr 3:176,102,351...176,124,306
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase TAS RGD PMID:12684510 RGD:728369 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Cst3 cystatin C IDA RGD PMID:15872057 RGD:2306505 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
G Dag1 dystroglycan 1 ISO
IBA
(PMID:19348877)
(MGI:1202096|PMID:9524190), (MGI:2156962|PMID:11798066), (MGI:5470500|PMID:23217742)
PMID:21873635
RGD PMID:9524190, PMID:11798066, PMID:19348877, PMID:23217742, PMID:21873635 MGI:1202096, MGI:2156962, MGI:5470500, RGD:13792537 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEA
ISO
GO_REF:0000107
(MGI:5523731|PMID:24191021)
Ensembl
RGD
PMID:24191021 GO_REF:0000107, MGI:5523731 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IDA RGD PMID:18803302 RGD:10401659 NCBI chr14:113,202,382...113,294,993
Ensembl chr14:113,202,419...113,295,014
JBrowse link
G Efna5 ephrin A5 IEA
ISO
GO_REF:0000107
(MGI:5471910|PMID:23242526)
Ensembl
RGD
PMID:23242526 GO_REF:0000107, MGI:5471910 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:29,430,789...29,488,737
Ensembl chr  X:29,430,831...29,488,739
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains IEA
ISO
IBA
GO_REF:0000107
(MGI:3807344|PMID:18757743)
PMID:21873635
Ensembl
RGD
PMID:18757743, PMID:21873635 GO_REF:0000107, MGI:3807344, RGD:13792537 NCBI chr 2:56,503,002...56,681,334
Ensembl chr 2:56,502,807...56,679,955
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO (MGI:2178511|PMID:11929769) RGD PMID:11929769 MGI:2178511 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEA
ISO
GO_REF:0000107
(MGI:2178511|PMID:11929769)
Ensembl
RGD
PMID:11929769 GO_REF:0000107, MGI:2178511 NCBI chr 3:2,617,795...2,623,818
Ensembl chr 3:2,617,805...2,623,445
JBrowse link
G Fbln1 fibulin 1 ISO (MGI:3607633|PMID:16061471) RGD PMID:16061471 MGI:3607633 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:3536967) RGD PMID:3536967 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fgf9 fibroblast growth factor 9 IDA ovarian granulosa cells and follicles; seminiferous tubules RGD PMID:17494997 RGD:2289861 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fn1 fibronectin 1 IDA
ISO
IEA
(MGI:2149189|PMID:11511678), (MGI:5523731|PMID:24191021), (MGI:77581|PMID:8984825)
GO_REF:0000107
RGD
Ensembl
PMID:8984825, PMID:11511678, PMID:24191021, PMID:14656002 GO_REF:0000107, MGI:2149189, MGI:5523731, MGI:77581, RGD:1578551 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 ISO (MGI:3054130|PMID:15345741), (MGI:3654854|PMID:16880404), (MGI:3697950|PMID:17251066), (MGI:3766685|PMID:17596926), (MGI:3797592|PMID:15623520), (MGI:3807344|PMID:18757743) RGD PMID:15345741, PMID:15623520, PMID:16880404, PMID:17251066, PMID:17596926, PMID:18757743 MGI:3054130, MGI:3654854, MGI:3697950, MGI:3766685, MGI:3797592, MGI:3807344 NCBI chr14:14,438,392...14,853,016
Ensembl chr14:14,439,082...14,689,554
JBrowse link
G Frem1 Fras1 related extracellular matrix 1 ISO (MGI:3654854|PMID:16880404), (MGI:3697950|PMID:17251066), (MGI:3766685|PMID:17596926), (MGI:3807344|PMID:18757743) RGD PMID:16880404, PMID:17251066, PMID:17596926, PMID:18757743 MGI:3654854, MGI:3697950, MGI:3766685, MGI:3807344 NCBI chr 5:101,018,009...101,166,794
Ensembl chr 5:101,020,448...101,166,651
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 ISO (MGI:3654854|PMID:16880404), (MGI:3697950|PMID:17251066), (MGI:3766685|PMID:17596926) RGD PMID:16880404, PMID:17251066, PMID:17596926 MGI:3654854, MGI:3697950, MGI:3766685 NCBI chr 2:142,747,501...142,885,604
Ensembl chr 2:142,747,501...142,885,604
JBrowse link
G Frem3 FRAS1 related extracellular matrix 3 ISO (MGI:3697950|PMID:17251066), (MGI:3721022|PMID:17462874), (MGI:3766685|PMID:17596926) RGD PMID:17251066, PMID:17462874, PMID:17596926 MGI:3697950, MGI:3721022, MGI:3766685 NCBI chr19:30,973,329...31,032,331
Ensembl chr19:30,973,329...31,031,817
JBrowse link
G Gsto1 glutathione S-transferase omega 1 IDA RGD PMID:11311527 RGD:5490519 NCBI chr 1:267,607,437...267,617,387
Ensembl chr 1:267,607,418...267,617,387
JBrowse link
G Hmcn1 hemicentin 1 ISO (MGI:3717022|PMID:17015624) RGD PMID:17015624 MGI:3717022 NCBI chr13:67,799,791...68,360,664
Ensembl chr13:67,799,791...68,360,664
JBrowse link
G Hmcn2 hemicentin 2 ISO (MGI:3717022|PMID:17015624) RGD PMID:17015624 MGI:3717022 NCBI chr 3:10,384,873...10,536,529 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO (MGI:1338595|PMID:10352025), (MGI:1349497|PMID:10579729), (MGI:2157278|PMID:11787818), (MGI:2158601|PMID:11802174), (MGI:2450496|PMID:12588956), (MGI:3525426|PMID:15381701), (MGI:3579932|PMID:15928325), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743), (MGI:75217|PMID:7670489) RGD PMID:7670489, PMID:10352025, PMID:10579729, PMID:11787818, PMID:11802174, PMID:12588956, PMID:15381701, PMID:15895400, PMID:15928325, PMID:18757743 MGI:1338595, MGI:1349497, MGI:2157278, MGI:2158601, MGI:2450496, MGI:3525426, MGI:3579932, MGI:3579951, MGI:3807344, MGI:75217, RGD:11556219 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Itga6 integrin subunit alpha 6 ISO (MGI:1202096|PMID:9524190) RGD PMID:9524190 MGI:1202096 NCBI chr 3:58,442,904...58,515,124
Ensembl chr 3:58,443,101...58,515,124
JBrowse link
G Itgb1 integrin subunit beta 1 IDA RGD PMID:9202984, PMID:18596883 RGD:1581320, RGD:2325689 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb4 integrin subunit beta 4 ISO (MGI:3692798|PMID:17011173) RGD PMID:17011173 MGI:3692798 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Lad1 ladinin 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:52,645,257...52,659,619
Ensembl chr13:52,645,257...52,659,619
JBrowse link
G Lama1 laminin subunit alpha 1 ISO
IBA
(PMID:10964500), (PMID:2099832)
(MGI:1095193|PMID:9264260), (MGI:1097278|PMID:9299121), (MGI:1928005|PMID:10639489), (MGI:2149189|PMID:11511678), (MGI:2181263|PMID:12051813), (MGI:2655007|PMID:12670870), (MGI:3579951|PMID:15895400), (MGI:3581325|PMID:15923608), (MGI:3610934|PMID:12631063), (MGI:3618677|PMID:16467571), (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211), (MGI:4441265|PMID:16631359), (MGI:4946462|PMID:21146513), (MGI:52425|PMID:1292752), (MGI:80991|PMID:1907584)
PMID:21873635
RGD PMID:1292752, PMID:1907584, PMID:2099832, PMID:9264260, PMID:9299121, PMID:10639489, PMID:10964500, PMID:11511678, PMID:12051813, PMID:12631063, PMID:12670870, PMID:15895400, PMID:15923608, PMID:16467571, PMID:16631359, PMID:18757743, PMID:19651211, PMID:21146513, PMID:21873635 MGI:1095193, MGI:1097278, MGI:1928005, MGI:2149189, MGI:2181263, MGI:2655007, MGI:3579951, MGI:3581325, MGI:3610934, MGI:3618677, MGI:3807344, MGI:4397493, MGI:4441265, MGI:4946462, MGI:52425, MGI:80991, RGD:13792537 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama2 laminin subunit alpha 2 IDA
ISO
IBA
(MGI:1095193|PMID:9264260), (MGI:1101275|PMID:9396756), (MGI:1202096|PMID:9524190), (MGI:2181263|PMID:12051813), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743)
PMID:21873635
(PMID:14557481), (PMID:2099832)
RGD PMID:2099832, PMID:9264260, PMID:9396756, PMID:9524190, PMID:12051813, PMID:14557481, PMID:15895400, PMID:18757743, PMID:11271373, PMID:21873635 MGI:1095193, MGI:1101275, MGI:1202096, MGI:2181263, MGI:3579951, MGI:3807344, RGD:1600203, RGD:13792537 NCBI chr 1:18,491,264...19,143,486
Ensembl chr 1:18,491,384...19,143,269
JBrowse link
G Lama3 laminin subunit alpha 3 IBA
ISO
IEA
PMID:21873635
(MGI:1095193|PMID:9264260), (MGI:2181263|PMID:12051813), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743)
GO_REF:0000044
RGD
UniProt
PMID:9264260, PMID:12051813, PMID:15895400, PMID:18757743, PMID:21873635 GO_REF:0000044, MGI:1095193, MGI:2181263, MGI:3579951, MGI:3807344, RGD:13792537 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lama4 laminin subunit alpha 4 ISO (PMID:14557481)
(MGI:1098373|PMID:9346933), (MGI:1101275|PMID:9396756), (MGI:2182185|PMID:9614228), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743)
RGD PMID:9346933, PMID:9396756, PMID:9614228, PMID:14557481, PMID:15895400, PMID:18757743 MGI:1098373, MGI:1101275, MGI:2182185, MGI:3579951, MGI:3807344 NCBI chr20:44,060,715...44,201,966
Ensembl chr20:44,060,731...44,209,614
JBrowse link
G Lama5 laminin subunit alpha 5 ISO
IBA
(PMID:14557481)
(MGI:1097278|PMID:9299121), (MGI:1101275|PMID:9396756), (MGI:1278097|PMID:9735344), (MGI:2150219|PMID:11507772), (MGI:2181263|PMID:12051813), (MGI:2182206|PMID:8707838), (MGI:2662649|PMID:12743034), (MGI:2670559|PMID:12921739), (MGI:2678847|PMID:14568553), (MGI:3579951|PMID:15895400), (MGI:3664526|PMID:16886065), (MGI:3807344|PMID:18757743), (MGI:4397493|PMID:19651211), (MGI:5427748|PMID:22665518)
PMID:21873635
RGD PMID:8707838, PMID:9299121, PMID:9396756, PMID:9735344, PMID:11507772, PMID:12051813, PMID:12743034, PMID:12921739, PMID:14557481, PMID:14568553, PMID:15895400, PMID:16886065, PMID:18757743, PMID:19651211, PMID:22665518, PMID:21873635 MGI:1097278, MGI:1101275, MGI:1278097, MGI:2150219, MGI:2181263, MGI:2182206, MGI:2662649, MGI:2670559, MGI:2678847, MGI:3579951, MGI:3664526, MGI:3807344, MGI:4397493, MGI:5427748, RGD:13792537 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb1 laminin subunit beta 1 ISO (PMID:14557481), (PMID:2099832)
(MGI:1095193|PMID:9264260), (MGI:1101275|PMID:9396756), (MGI:2662649|PMID:12743034), (MGI:3045829|PMID:15102706), (MGI:3579951|PMID:15895400), (MGI:3610934|PMID:12631063), (MGI:3776221|PMID:16041630), (MGI:3807344|PMID:18757743), (MGI:4441265|PMID:16631359), (MGI:52425|PMID:1292752)
RGD PMID:1292752, PMID:2099832, PMID:9264260, PMID:9396756, PMID:12631063, PMID:12743034, PMID:14557481, PMID:15102706, PMID:15895400, PMID:16041630, PMID:16631359, PMID:18757743 MGI:1095193, MGI:1101275, MGI:2662649, MGI:3045829, MGI:3579951, MGI:3610934, MGI:3776221, MGI:3807344, MGI:4441265, MGI:52425 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamb2 laminin subunit beta 2 ISO
IEA
(PMID:10964500), (PMID:14557481), (PMID:2099832)
(MGI:3776221|PMID:16041630), (MGI:75217|PMID:7670489)
GO_REF:0000044
RGD
UniProt
PMID:2099832, PMID:7670489, PMID:10964500, PMID:14557481, PMID:16041630 GO_REF:0000044, MGI:3776221, MGI:75217 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
G Lamb3 laminin subunit beta 3 ISO (MGI:1095193|PMID:9264260), (MGI:3807344|PMID:18757743), (MGI:65651|PMID:8012114) RGD PMID:8012114, PMID:9264260, PMID:18757743 MGI:1095193, MGI:3807344, MGI:65651 NCBI chr13:112,031,614...112,073,187
Ensembl chr13:112,031,594...112,073,186
JBrowse link
G Lamc1 laminin subunit gamma 1 ISO
IBA
(PMID:14557481), (PMID:15159456), (PMID:22952693)
(MGI:1095193|PMID:9264260), (MGI:1101275|PMID:9396756), (MGI:2181263|PMID:12051813), (MGI:2662649|PMID:12743034), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743), (MGI:52425|PMID:1292752), (MGI:75217|PMID:7670489)
PMID:21873635
RGD PMID:1292752, PMID:7670489, PMID:9264260, PMID:9396756, PMID:12051813, PMID:12743034, PMID:14557481, PMID:15159456, PMID:15895400, PMID:18757743, PMID:22952693, PMID:21873635 MGI:1095193, MGI:1101275, MGI:2181263, MGI:2662649, MGI:3579951, MGI:3807344, MGI:52425, MGI:75217, RGD:13792537 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
G Lamc2 laminin subunit gamma 2 IBA
ISO
PMID:21873635
(MGI:1095193|PMID:9264260), (MGI:2156955|PMID:11733994), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743)
RGD PMID:9264260, PMID:11733994, PMID:15895400, PMID:18757743, PMID:21873635 MGI:1095193, MGI:2156955, MGI:3579951, MGI:3807344, RGD:13792537 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
G Lamc3 laminin subunit gamma 3 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 3:9,265,407...9,327,107
Ensembl chr 3:9,267,122...9,326,993
JBrowse link
G LOC100911572 collagen alpha-3(IV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:90,856,897...90,877,771
Ensembl chr 9:90,857,308...90,874,704
JBrowse link
G LOC108348074 collagen alpha-1(XV) chain-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:64,475,618...64,543,510 JBrowse link
G Loxl1 lysyl oxidase-like 1 IDA RGD PMID:22382377 RGD:7394733 NCBI chr 8:63,067,757...63,092,124
Ensembl chr 8:63,067,300...63,092,009
JBrowse link
G Loxl2 lysyl oxidase-like 2 IDA PMID:21835952 UniProt PMID:21835952 RGD:8553848 NCBI chr15:51,276,022...51,365,238
Ensembl chr15:51,303,909...51,365,234
JBrowse link
G Matn2 matrilin 2 ISO (MGI:3850905|PMID:19295126) RGD PMID:19295126 MGI:3850905 NCBI chr 7:72,985,832...73,210,093
Ensembl chr 7:72,985,495...73,207,695
JBrowse link
G Megf9 multiple EGF-like-domains 9 IBA
ISO
PMID:21873635
(MGI:3699792|PMID:16981854)
RGD PMID:16981854, PMID:21873635 MGI:3699792, RGD:13792537 NCBI chr 5:86,586,996...86,696,388
Ensembl chr 5:86,586,996...86,696,388
JBrowse link
G Mmrn2 multimerin 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr16:10,727,552...10,749,303
Ensembl chr16:10,727,571...10,749,382
JBrowse link
G Nid1 nidogen 1 ISO
IEA
(PMID:22952693)
PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (MGI:1928005|PMID:10639489), (MGI:2181263|PMID:12051813), (MGI:2387502|PMID:12243745), (MGI:2450496|PMID:12588956), (MGI:2680880|PMID:14566019), (MGI:3579951|PMID:15895400), (MGI:3624169|PMID:16330543), (MGI:3766685|PMID:17596926), (MGI:3807344|PMID:18757743), (MGI:75217|PMID:7670489)
GO_REF:0000044
RGD
UniProt
PMID:7670489, PMID:10639489, PMID:12051813, PMID:12243745, PMID:12588956, PMID:14566019, PMID:15895400, PMID:16330543, PMID:17596926, PMID:18757743, PMID:22952693 GO_REF:0000044, MGI:1928005, MGI:2181263, MGI:2387502, MGI:2450496, MGI:2680880, MGI:3579951, MGI:3624169, MGI:3766685, MGI:3807344, MGI:75217 NCBI chr17:90,553,161...90,627,133
Ensembl chr17:90,553,394...90,627,101
JBrowse link
G Nid2 nidogen 2 ISO
IEA
IBA
(PMID:22952693)
PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (MGI:2387502|PMID:12243745), (MGI:3579951|PMID:15895400), (MGI:3807344|PMID:18757743)
GO_REF:0000044
PMID:21873635
RGD
UniProt
PMID:12243745, PMID:15895400, PMID:18757743, PMID:22952693, PMID:21873635 GO_REF:0000044, MGI:2387502, MGI:3579951, MGI:3807344, RGD:13792537 NCBI chr15:4,893,999...4,951,893
Ensembl chr15:4,894,213...4,951,917
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin IDA MMO:0000686 RGD PMID:21876538 RGD:38599163 NCBI chr 1:88,922,346...88,950,560
Ensembl chr 1:88,922,433...88,950,559
JBrowse link
G Npnt nephronectin ISO (MGI:3807344|PMID:18757743), (MGI:4947862|PMID:21335239) RGD PMID:18757743, PMID:21335239 MGI:3807344, MGI:4947862 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Ntn1 netrin 1 IEA
ISO
IBA
GO_REF:0000107
(MGI:3807344|PMID:18757743)
PMID:21873635
Ensembl
RGD
PMID:18757743, PMID:21873635 GO_REF:0000107, MGI:3807344, RGD:13792537 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Ntn3 netrin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,577,725...13,580,821
Ensembl chr10:13,577,725...13,580,821
JBrowse link
G Ntn4 netrin 4 ISO (MGI:3044539|PMID:15186747), (MGI:3722516|PMID:17588941), (MGI:3807344|PMID:18757743) RGD PMID:15186747, PMID:17588941, PMID:18757743 MGI:3044539, MGI:3722516, MGI:3807344 NCBI chr 7:34,533,543...34,649,330
Ensembl chr 7:34,533,543...34,649,481
JBrowse link
G Ntn5 netrin 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:101,668,354...101,678,117
Ensembl chr 1:101,669,086...101,677,596
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IDA PMID:10455179 MGI PMID:10455179 RGD:633221 NCBI chr 5:138,279,597...138,294,280
Ensembl chr 5:138,279,506...138,294,262
JBrowse link
G P3h2 prolyl 3-hydroxylase 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:3805645|PMID:18487197)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18487197 GO_REF:0000024, GO_REF:0000107, MGI:3805645 NCBI chr11:78,028,885...78,169,746
Ensembl chr11:78,029,038...78,169,648
JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:107,245,573...107,282,256
Ensembl chr 6:107,245,820...107,276,755
JBrowse link
G Ptn pleiotrophin IDA RGD PMID:9990431 RGD:10044215 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rell2 RELT-like 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr18:31,094,965...31,098,536
Ensembl chr18:31,094,965...31,098,536
JBrowse link
G Rpsa ribosomal protein SA IDA RGD PMID:11553521 RGD:2299067 NCBI chr 8:128,806,053...128,809,987
Ensembl chr 8:128,806,129...128,809,986
JBrowse link
G Runx1 RUNX family transcription factor 1 ISO (MGI:3692798|PMID:17011173) RGD PMID:17011173 MGI:3692798 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021
JBrowse link
G Serpinf1 serpin family F member 1 IDA RGD PMID:15616035 RGD:1359799 NCBI chr10:62,241,750...62,254,145
Ensembl chr10:62,241,756...62,254,287
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IDA
TAS
PMID:8621634 RGD
CAFA
PMID:9015313, PMID:8621634 RGD:61563, RGD:12793010 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:104,718,403...104,879,611
Ensembl chr 6:104,718,512...104,877,980
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spn sialophorin ISO (MGI:66056|PMID:7514104) RGD PMID:7514104 MGI:66056 NCBI chr 1:198,572,999...198,585,664
Ensembl chr 1:198,572,999...198,577,226
JBrowse link
G Tf transferrin IDA RGD PMID:1723977 RGD:1625719 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IDA RGD PMID:16479080 RGD:2302094 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfbi transforming growth factor, beta induced IDA RGD PMID:12911551 RGD:1304421 NCBI chr17:8,400,123...8,429,338
Ensembl chr17:8,400,146...8,429,338
JBrowse link
G Thbs2 thrombospondin 2 ISO (MGI:1860780|PMID:10669089) RGD PMID:10669089 MGI:1860780 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Thbs4 thrombospondin 4 IEA
ISO
GO_REF:0000107
(PMID:17927980)
Ensembl
RGD
PMID:17927980 GO_REF:0000107 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 IDA
ISO
(MGI:2675517|PMID:12950084) RGD PMID:12950084, PMID:9579471 MGI:2675517, RGD:2290365 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 ISO (MGI:2675517|PMID:12950084) RGD PMID:12950084 MGI:2675517 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 IEA
ISO
GO_REF:0000107
(MGI:2675517|PMID:12950084)
Ensembl
RGD
PMID:12950084 GO_REF:0000107, MGI:2675517 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link
G Tinag tubulointerstitial nephritis antigen ISO (PMID:1762287) RGD PMID:1762287 NCBI chr 8:84,122,113...84,320,714
Ensembl chr 8:84,279,229...84,320,746
JBrowse link
G Tmeff1 transmembrane protein with EGF-like and two follistatin-like domains 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:64,326,733...64,412,531
Ensembl chr 5:64,326,733...64,412,523
JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:55,379,130...55,673,704
Ensembl chr 9:55,384,100...55,673,829
JBrowse link
G Tnc tenascin C ISO (MGI:3832136|PMID:18950615), (MGI:61475|PMID:7687262), (MGI:85263|PMID:9013311) RGD PMID:7687262, PMID:9013311, PMID:18950615 MGI:3832136, MGI:61475, MGI:85263 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Ush2a usherin ISO
IBA
(PMID:12433396)
(MGI:3028449|PMID:14676276)
PMID:21873635
RGD PMID:12433396, PMID:14676276, PMID:21873635 MGI:3028449, RGD:13792537 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:11940521 RGD:628330 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vtn vitronectin IDA RGD PMID:11728964 RGD:10003096 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 ISO (MGI:3807344|PMID:18757743), (MGI:3807821|PMID:18314316) RGD PMID:18314316, PMID:18757743 MGI:3807344, MGI:3807821 NCBI chr 5:173,216,737...173,221,923
Ensembl chr 5:173,216,741...173,222,440
JBrowse link
G Vwa2 von Willebrand factor A domain containing 2 IBA
ISO
PMID:21873635
(MGI:4397493|PMID:19651211)
RGD PMID:19651211, PMID:21873635 MGI:4397493, RGD:13792537 NCBI chr 1:277,689,478...277,730,407
Ensembl chr 1:277,689,729...277,730,389
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:91,201,141...91,348,219
Ensembl chr14:91,201,730...91,348,219
JBrowse link
collagen type I trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain ISO
IBA
(PMID:14976317), (PMID:17576241), (PMID:19932771)
MGI:1857154 (MGI:66506|PMID:8018053), (MGI:73949|PMID:7790374)
PMID:21873635
RGD PMID:7790374, PMID:8018053, PMID:14976317, PMID:17576241, PMID:19932771, PMID:21873635 MGI:66506, MGI:73949, RGD:13792537 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col1a2 collagen type I alpha 2 chain ISO
IBA
(PMID:17955022), (PMID:18375391), (PMID:19932771)
(MGI:68743|PMID:7825727)
PMID:21873635
RGD PMID:7825727, PMID:17955022, PMID:18375391, PMID:19932771, PMID:21873635 MGI:68743, RGD:13792537 NCBI chr 4:31,534,225...31,569,152
Ensembl chr 4:31,534,225...31,569,151
JBrowse link
collagen type II trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain ISO
IBA
IEA
(PMID:8660302)
MGI:1857275 (MGI:1330638|PMID:9880238), (MGI:55057|PMID:7276808)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:7276808, PMID:8660302, PMID:9880238, PMID:21873635 GO_REF:0000107, MGI:1330638, MGI:55057, RGD:13792537 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
collagen type III trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain ISO (PMID:17576241), (PMID:19932771), (PMID:7487954)
(MGI:68743|PMID:7825727)
RGD PMID:7487954, PMID:7825727, PMID:17576241, PMID:19932771 MGI:68743 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
collagen type IV trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:16107487)
(MGI:2183884|PMID:12101409)
RGD PMID:12101409, PMID:16107487 MGI:2183884 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Col4a2 collagen type IV alpha 2 chain IBA
ISO
PMID:21873635
(MGI:2183884|PMID:12101409)
RGD PMID:12101409, PMID:21873635 MGI:2183884, RGD:13792537 NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO (PMID:10766752)
(MGI:2183884|PMID:12101409)
RGD PMID:10766752, PMID:12101409 MGI:2183884 NCBI chr 9:88,357,528...88,484,735
Ensembl chr 9:88,357,556...88,485,830
JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO
IBA
(PMID:7523402)
(MGI:69166|PMID:7962065)
PMID:21873635
RGD PMID:7523402, PMID:7962065, PMID:21873635 MGI:69166, RGD:13792537 NCBI chr 9:88,314,763...88,357,183
Ensembl chr 9:88,232,455...88,357,182
JBrowse link
G Col4a5 collagen type IV alpha 5 chain ISO (MGI:2183884|PMID:12101409) RGD PMID:12101409 MGI:2183884 NCBI chr  X:112,769,595...112,983,720
Ensembl chr  X:112,769,645...112,983,685
JBrowse link
G Col4a6 collagen type IV alpha 6 chain IBA
ISO
PMID:21873635
(MGI:2148900|PMID:10965041), (MGI:2183884|PMID:12101409)
RGD PMID:10965041, PMID:12101409, PMID:21873635 MGI:2148900, MGI:2183884, RGD:13792537 NCBI chr  X:112,405,647...112,768,337
Ensembl chr  X:112,405,647...112,473,822
JBrowse link
G Otol1 otolin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:166,845,543...166,866,513
Ensembl chr 2:166,856,784...166,866,195
JBrowse link
collagen type V trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col16a1 collagen type XVI alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
JBrowse link
G Col5a1 collagen type V alpha 1 chain TAS
IBA
ISO
IEA
PMID:21873635
(PMID:9683580)
GO_REF:0000107
RGD
Ensembl
PMID:9683580, PMID:10852920, PMID:21873635 GO_REF:0000107, RGD:70693, RGD:13792537 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain TAS
IBA
ISO
PMID:21873635
(PMID:9425231), (PMID:9783710)
RGD PMID:9425231, PMID:9783710, PMID:9822201, PMID:21873635 RGD:70694, RGD:13792537 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Col5a3 collagen type V alpha 3 chain TAS
ISO
(MGI:3583053|PMID:15908193) RGD PMID:15908193, PMID:10852920 MGI:3583053, RGD:70693 NCBI chr 8:21,786,324...21,831,751
Ensembl chr 8:21,786,324...21,831,668
JBrowse link
collagen type XI trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain ISO
IBA
(PMID:3182841)
PMID:21873635
RGD PMID:3182841, PMID:21873635 RGD:13792537 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
collagen type XII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col12a1 collagen type XII alpha 1 chain IDA RGD PMID:10419532 RGD:727275 NCBI chr 8:87,042,820...87,150,701
Ensembl chr 8:87,040,799...87,158,368
JBrowse link
collagen type XVIII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col18a1 collagen type XVIII alpha 1 chain TAS RGD PMID:11592600 RGD:632362 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
collagen-containing extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IDA RGD PMID:15777654 RGD:9681749 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 ISO (PMID:21402694) RGD PMID:21402694 NCBI chr 7:18,409,147...18,439,012
Ensembl chr 7:18,409,147...18,439,012
JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:31,977,001...32,000,378
Ensembl chr 8:31,977,001...32,000,378
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:36,098,051...36,304,416
Ensembl chr10:36,098,051...36,304,409
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:25,411,174...25,456,639
Ensembl chr11:25,410,975...25,456,836
JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:32,017,684...32,037,529
Ensembl chr 8:32,018,560...32,037,531
JBrowse link
G Agrn agrin ISO (PMID:17628813) RGD PMID:17628813 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IDA RGD PMID:7794128 RGD:1626075 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Amelx amelogenin, X-linked IEA
ISO
GO_REF:0000002
(PMID:2509010)
InterPro
RGD
PMID:2509010 GO_REF:0000002 NCBI chr  X:26,439,197...26,450,495
Ensembl chr  X:26,439,197...26,450,495
JBrowse link
G Angpt1 angiopoietin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206
JBrowse link
G Angpt2 angiopoietin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,966,480...76,016,147
Ensembl chr16:75,966,352...76,016,195
JBrowse link
G Angpt4 angiopoietin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,421,724...147,455,670
Ensembl chr 3:147,422,095...147,455,670
JBrowse link
G Angptl1 angiopoietin-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:74,456,487...74,463,031
Ensembl chr13:74,410,010...74,474,681
JBrowse link
G Angptl2 angiopoietin-like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:12,262,822...12,292,665
Ensembl chr 3:12,262,822...12,292,663
JBrowse link
G Angptl3 angiopoietin-like 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:117,698,590...117,706,729
Ensembl chr 5:117,698,764...117,705,808
JBrowse link
G Angptl4 angiopoietin-like 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:18,627,814...18,634,043
Ensembl chr 7:18,627,808...18,634,079
JBrowse link
G Angptl6 angiopoietin-like 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:21,895,523...21,902,002
Ensembl chr 8:21,895,524...21,901,829
JBrowse link
G Angptl7 angiopoietin like 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,311,794...165,318,361
Ensembl chr 5:165,312,130...165,316,652
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO (PMID:8101026), (PMID:8218200) RGD PMID:8101026, PMID:8218200 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Bmp7 bone morphogenetic protein 7 IDA RGD PMID:9626398 RGD:2289041 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Calr calreticulin IDA RGD PMID:12782144 RGD:2326184 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Ccn3 cellular communication network factor 3 IDA RGD PMID:19286457 RGD:2306292 NCBI chr 7:94,375,134...94,382,154
Ensembl chr 7:94,375,020...94,383,024
JBrowse link
G Chadl chondroadherin-like ISO (PMID:25451920)
(MGI:5617405|PMID:25451920)
RGD PMID:25451920 MGI:5617405 NCBI chr 7:122,915,847...122,929,127
Ensembl chr 7:122,922,022...122,926,336
JBrowse link
G Cilp cartilage intermediate layer protein ISO (PMID:9722583) RGD PMID:9722583 NCBI chr 8:70,760,922...70,775,891
Ensembl chr 8:70,760,922...70,775,891
JBrowse link
G Clu clusterin colocalizes_with ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Coch cochlin ISO
IBA
(PMID:22610276)
PMID:21873635
RGD PMID:22610276, PMID:21873635 RGD:13792537 NCBI chr 6:72,359,702...72,373,710
Ensembl chr 6:72,359,791...72,373,695
JBrowse link
G Col10a1 collagen type X alpha 1 chain IDA RGD PMID:7649371 RGD:1298775 NCBI chr20:41,180,295...41,190,664
Ensembl chr20:41,184,287...41,189,633
JBrowse link
G Col11a1 collagen type XI alpha 1 chain IDA RGD PMID:17062562 RGD:1600882 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col12a1 collagen type XII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:87,042,820...87,150,701
Ensembl chr 8:87,040,799...87,158,368
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
G Col20a1 collagen type XX alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:176,491,292...176,526,009
Ensembl chr 3:176,494,768...176,526,018
JBrowse link
G Col2a1 collagen type II alpha 1 chain IDA RGD PMID:7649371 RGD:1298775 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col3a1 collagen type III alpha 1 chain IDA
ISO
(PMID:14970208), (PMID:7487954) RGD PMID:7487954, PMID:14970208, PMID:20610530 RGD:7257557 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Col5a1 collagen type V alpha 1 chain ISO (PMID:14970208) RGD PMID:14970208 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a3 collagen type V alpha 3 chain IDA RGD PMID:15383532 RGD:5683638 NCBI chr 8:21,786,324...21,831,751
Ensembl chr 8:21,786,324...21,831,668
JBrowse link
G Col6a2 collagen type VI alpha 2 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:12,773,472...12,801,179
Ensembl chr20:12,773,427...12,801,180
JBrowse link
G Col7a1 collagen type VII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,694,441...117,726,844
Ensembl chr 8:117,694,605...117,726,844
JBrowse link
G Comp cartilage oligomeric matrix protein IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16778685, PMID:21873635 RGD:1600712, RGD:13792537 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 IDA RGD PMID:11121438 RGD:1599784 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Dspp dentin sialophosphoprotein IDA RGD PMID:16776771 RGD:1599799 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Ecm1 extracellular matrix protein 1 ISO
IBA
(PMID:20870722)
PMID:21873635
RGD PMID:20870722, PMID:21873635 RGD:13792537 NCBI chr 2:197,855,468...197,860,973
Ensembl chr 2:197,855,460...197,860,699
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:113,202,382...113,294,993
Ensembl chr14:113,202,419...113,295,014
JBrowse link
G Eln elastin IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO (PMID:26462740) RGD PMID:26462740 NCBI chr 6:26,821,249...26,829,013
Ensembl chr 6:26,821,255...26,828,972
JBrowse link
G F2 coagulation factor II IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:21191574, PMID:21873635 RGD:7387308, RGD:13792537 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G F3 coagulation factor III, tissue factor IEA
ISO
GO_REF:0000107
(PMID:2704749)
Ensembl
RGD
PMID:2704749 GO_REF:0000107 NCBI chr 2:225,310,686...225,322,281
Ensembl chr 2:225,310,624...225,322,272
JBrowse link
G Fbln2 fibulin 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:122,835,237...122,895,127
Ensembl chr 4:122,835,436...122,895,121
JBrowse link
G Fbln5 fibulin 5 colocalizes_with ISS
ISO
GO_REF:0000024
(MGI:3610795|PMID:15528465)
(PMID:17035250)
UniProt
RGD
PMID:15528465, PMID:17035250 GO_REF:0000024, MGI:3610795 NCBI chr 6:125,644,797...125,723,957
Ensembl chr 6:125,644,804...125,723,944
JBrowse link
G Fbn1 fibrillin 1 IDA
ISO
(MGI:3698678|PMID:17099216), (MGI:5795811|PMID:24039232) RGD PMID:17099216, PMID:24039232, PMID:15849235 MGI:3698678, MGI:5795811, RGD:1601147 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fcna ficolin A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Fcnb ficolin B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284
JBrowse link
G Fgb fibrinogen beta chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,028,044...182,035,026
Ensembl chr 2:182,027,115...182,038,178
JBrowse link
G Fgf10 fibroblast growth factor 10 colocalizes_with ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 colocalizes_with ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fgg fibrinogen gamma chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,987,080...181,994,523
Ensembl chr 2:181,987,217...181,994,514
JBrowse link
G Fgl1 fibrinogen-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:54,153,086...54,188,120
Ensembl chr16:54,153,054...54,188,181
JBrowse link
G Fgl2 fibrinogen-like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,323,598...10,329,241
Ensembl chr 4:10,323,607...10,329,241
JBrowse link
G Fibcd1 fibrinogen C domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:9,365,866...9,399,578
Ensembl chr 3:9,366,053...9,396,450
JBrowse link
G Fibcd1l1 fibrinogen C domain containing 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:9,998,057...10,032,206
Ensembl chr 3:9,998,458...10,031,530
JBrowse link
G Fmod fibromodulin IDA
IEA
GO_REF:0000002 InterPro PMID:12941075 GO_REF:0000002, RGD:2315082 NCBI chr13:50,874,886...50,885,503
Ensembl chr13:50,873,605...50,885,563
JBrowse link
G Fn1 fibronectin 1 ISO
IBA
(PMID:16157329), (PMID:1632457)
PMID:21873635
RGD PMID:1632457, PMID:16157329, PMID:21873635 RGD:13792537 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Gh1 growth hormone 1 IDA RGD PMID:9255605 RGD:12904880 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Gpc1 glypican 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:99,998,275...100,026,818
Ensembl chr 9:99,998,275...100,026,818
JBrowse link
G Gpc2 glypican 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,593,041...19,599,374
Ensembl chr12:19,593,041...19,599,374
JBrowse link
G Gpc3 glypican 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Gpc4 glypican 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:139,354,325...139,464,876
Ensembl chr  X:139,354,155...139,464,798
JBrowse link
G Gpc6 glypican 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:102,164,091...103,174,721
Ensembl chr15:102,164,751...103,170,847
JBrowse link
G Grm1 glutamate metabotropic receptor 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:4,753,141...5,165,859
Ensembl chr 1:4,753,144...5,165,859
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 IDA RGD PMID:15928048 RGD:1624263 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Htra1 HtrA serine peptidase 1 IDA dentin matrix RGD PMID:22595117 RGD:7394756 NCBI chr 1:201,499,067...201,548,508
Ensembl chr 1:201,499,028...201,548,513
JBrowse link
G Lamb1 laminin subunit beta 1 IDA RGD PMID:15928048 RGD:1624263 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamc1 laminin subunit gamma 1 IDA RGD PMID:15928048 RGD:1624263 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
G LOC100911854 mannose-binding protein C-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:248,723,370...248,730,969
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G LOC102553715 microfibril-associated glycoprotein 4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:49,000,914...49,003,935
Ensembl chr10:49,000,973...49,003,931
JBrowse link
G LOC103690116 osteomodulin IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,635,588...14,646,368
Ensembl chr17:14,635,184...14,637,832
Ensembl chr17:14,635,184...14,637,832
JBrowse link
G Lrrc15 leucine rich repeat containing 15 colocalizes_with IEA
ISO
GO_REF:0000107
(PMID:16098915)
Ensembl
RGD
PMID:16098915 GO_REF:0000107 NCBI chr11:74,040,846...74,052,179
Ensembl chr11:74,050,166...74,051,902
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 IDA
ISO
IEA
(PMID:16157329)
GO_REF:0000107
RGD
Ensembl
PMID:16157329, PMID:9766531 GO_REF:0000107, RGD:10412061 NCBI chr 6:21,203,502...21,600,441
Ensembl chr 6:21,203,502...21,600,451
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO (PMID:16157329) RGD PMID:16157329 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 ISO (PMID:16157329) RGD PMID:16157329 NCBI chr 1:84,118,046...84,152,095
Ensembl chr 1:84,118,046...84,150,084
JBrowse link
G Matn1 matrilin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:149,077,412...149,086,957
Ensembl chr 5:149,077,412...149,086,957
JBrowse link
G Matn2 matrilin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:72,985,832...73,210,093
Ensembl chr 7:72,985,495...73,207,695
JBrowse link
G Matn3 matrilin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:34,071,428...34,091,048
Ensembl chr 6:34,071,428...34,091,048
JBrowse link
G Matn4 matrilin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,838,632...160,853,650
Ensembl chr 3:160,838,632...160,853,650
JBrowse link
G Mbl1 mannose binding lectin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,736,154...18,742,193
Ensembl chr16:18,736,154...18,742,193
JBrowse link
G Mbl2 mannose binding lectin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G Mfap4 microfibril associated protein 4 ISO
IBA
(PMID:26601954)
PMID:21873635
RGD PMID:26601954, PMID:21873635 RGD:13792537 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
G Mgp matrix Gla protein IDA
IEA
GO_REF:0000002 InterPro PMID:11716499 GO_REF:0000002, RGD:2293597 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Myoc myocilin ISS
ISO
IEA
GO_REF:0000024
(PMID:11773026)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11773026 GO_REF:0000024, GO_REF:0000107 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Ndp norrin cystine knot growth factor NDP ISO (PMID:15035989)
(MGI:3621833|PMID:15035989)
RGD PMID:15035989 MGI:3621833 NCBI chr  X:6,791,090...6,815,586
Ensembl chr  X:6,791,136...6,815,583
Ensembl chr  X:6,791,136...6,815,583
JBrowse link
G Npnt nephronectin ISO (MGI:4947862|PMID:21335239) RGD PMID:21335239 MGI:4947862 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Omd osteomodulin IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,476,100...15,484,324
Ensembl chr17:15,475,710...15,484,269
JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:12535616)
Ensembl
RGD
PMID:12535616, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:126,749,508...126,947,392
Ensembl chr 1:126,749,508...126,947,392
JBrowse link
G Plat plasminogen activator, tissue type NOT ISO (PMID:1632457) RGD PMID:1632457 NCBI chr16:74,098,263...74,122,897
Ensembl chr16:74,098,260...74,122,889
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO (MGI:5804716|PMID:27435297) RGD PMID:27435297 MGI:5804716 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Plscr1 phospholipid scramblase 1 ISS
ISO
GO_REF:0000024
(PMID:20870722)
UniProt
RGD
PMID:20870722 GO_REF:0000024 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Podnl1 podocan-like 1 ISO (MGI:5784978|PMID:21672516) RGD PMID:21672516 MGI:5784978 NCBI chr19:25,240,001...25,246,583
Ensembl chr19:25,239,674...25,246,525
JBrowse link
G Postn periostin ISO (PMID:18450759)
(MGI:3804342|PMID:18450759)
RGD PMID:18450759 MGI:3804342 NCBI chr 2:143,656,820...143,688,087
Ensembl chr 2:143,656,793...143,688,087
JBrowse link
G Prelp proline and arginine rich end leucine rich repeat protein IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:50,749,526...50,773,934
Ensembl chr13:50,749,514...50,761,355
JBrowse link
G Pxdn peroxidasin ISO (PMID:19590037)
(MGI:3851833|PMID:19590037)
RGD PMID:19590037 MGI:3851833 NCBI chr 6:48,866,496...48,982,368
Ensembl chr 6:48,866,601...48,980,340
JBrowse link
G Rarres2 retinoic acid receptor responder 2 ISO (PMID:19443732) RGD PMID:19443732 NCBI chr 4:78,205,809...78,208,956
Ensembl chr 4:78,205,812...78,208,767
JBrowse link
G Rpsa ribosomal protein SA IDA RGD PMID:11553521 RGD:2299067 NCBI chr 8:128,806,053...128,809,987
Ensembl chr 8:128,806,129...128,809,986
JBrowse link
G Serpine1 serpin family E member 1 IEA
ISO
GO_REF:0000107
(PMID:1632457)
Ensembl
RGD
PMID:1632457 GO_REF:0000107 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Serpine2 serpin family E member 2 IEA
ISO
GO_REF:0000107
(PMID:3279057)
Ensembl
RGD
PMID:3279057 GO_REF:0000107 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(PMID:10347172), (PMID:9192640)
Ensembl
RGD
PMID:9192640, PMID:10347172 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO (PMID:14709558) RGD PMID:14709558 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Snorc secondary ossification center associated regulator of chondrocyte maturation ISO (MGI:6103145|PMID:28323137) RGD PMID:28323137 MGI:6103145 NCBI chr 9:94,562,839...94,568,312
Ensembl chr 9:94,562,839...94,568,312
JBrowse link
G Sod3 superoxide dismutase 3 colocalizes_with IDA
ISO
(MGI:3610795|PMID:15528465)
(PMID:9699963)
RGD PMID:9699963, PMID:15528465, PMID:16372329 MGI:3610795, RGD:1581086 NCBI chr14:60,958,583...60,971,143
Ensembl chr14:60,958,592...60,964,324
JBrowse link
G Sparcl1 SPARC like 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:6,994,261...7,025,309
Ensembl chr14:6,994,190...7,025,308
JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) RGD PMID:21217009 MGI:4939978 NCBI chr 1:72,443,750...72,462,293
Ensembl chr 1:72,443,758...72,461,547
JBrowse link
G Tecta tectorin alpha IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:46,603,728...46,675,658
Ensembl chr 8:46,603,728...46,675,544
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IDA RGD PMID:24224514 RGD:11073670 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEA
ISO
GO_REF:0000107
(PMID:18049952)
Ensembl
RGD
PMID:18049952 GO_REF:0000107 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO (PMID:18049952) RGD PMID:18049952 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 TAS PMID:1333192 BHF-UCL PMID:1333192 RGD:8554613 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tgm4 transglutaminase 4 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:20596668)
Ensembl
RGD
PMID:20596668, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:132,117,279...132,157,485
Ensembl chr 8:132,120,452...132,157,485
JBrowse link
G Thbs1 thrombospondin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs2 thrombospondin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Thbs3 thrombospondin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Thbs4 thrombospondin 4 ISS
ISO
IBA
GO_REF:0000024
(MGI:5436396|PMID:22362893)
PMID:21873635
UniProt
RGD
PMID:22362893, PMID:21873635 GO_REF:0000024, MGI:5436396, RGD:13792537 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Tnn tenascin N IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tnr tenascin R IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link
G Vcan versican IDA RGD PMID:12586779 RGD:1299255 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842
JBrowse link
G Vit vitrin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:1,091,817...1,208,888
Ensembl chr 6:1,147,012...1,208,392
JBrowse link
G Vtn vitronectin IDA
ISO
(PMID:1632457) RGD PMID:1632457, PMID:2426279 RGD:10003088 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwa2 von Willebrand factor A domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,689,478...277,730,407
Ensembl chr 1:277,689,729...277,730,389
JBrowse link
G Vwf von Willebrand factor IDA
ISO
IEA
(PMID:6754744)
GO_REF:0000107
RGD
Ensembl
PMID:6754744, PMID:14762664 GO_REF:0000107, RGD:1599021 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wnt2 Wnt family member 2 ISO (PMID:15507471) RGD PMID:15507471 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Zg16 zymogen granule protein 16 ISS
ISO
GO_REF:0000024
(PMID:17307141)
UniProt
RGD
PMID:17307141 GO_REF:0000024 NCBI chr 1:198,483,800...198,486,157
Ensembl chr 1:198,483,805...198,486,157
JBrowse link
G Zp1 zona pellucida glycoprotein 1 IEA
ISO
GO_REF:0000107
(MGI:2177349|PMID:11906903)
Ensembl
RGD
PMID:11906903 GO_REF:0000107, MGI:2177349 NCBI chr 1:226,966,366...226,972,746
Ensembl chr 1:226,966,366...226,972,746
JBrowse link
G Zp2 zona pellucida glycoprotein 2 ISS
ISO
IEA
GO_REF:0000024
(MGI:2177349|PMID:11906903)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11906903 GO_REF:0000024, GO_REF:0000107, MGI:2177349 NCBI chr 1:189,899,906...189,911,650
Ensembl chr 1:189,899,892...189,911,650
JBrowse link
G Zp3 zona pellucida glycoprotein 3 ISS
ISO
IEA
GO_REF:0000024
(MGI:2177349|PMID:11906903), (MGI:4943662|PMID:19052627)
(PMID:19246320)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11906903, PMID:19052627, PMID:19246320 GO_REF:0000024, GO_REF:0000107, MGI:2177349, MGI:4943662 NCBI chr12:23,735,225...23,752,734
Ensembl chr12:23,735,223...23,742,190
JBrowse link
cone matrix sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbp3 retinol binding protein 3 ISO
IBA
(PMID:21935947)
PMID:21873635
RGD PMID:21935947, PMID:21873635 RGD:13792537 NCBI chr16:10,277,775...10,286,243
Ensembl chr16:10,277,775...10,286,243
JBrowse link
elastic fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin IEA
ISO
GO_REF:0000107
(MGI:3698678|PMID:17099216)
(PMID:10424889), (PMID:7534784)
Ensembl
RGD
PMID:7534784, PMID:10424889, PMID:17099216 GO_REF:0000107, MGI:3698678 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Fbln1 fibulin 1 ISO (PMID:7534784) RGD PMID:7534784 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
G Fbln5 fibulin 5 colocalizes_with ISO (MGI:2681471|PMID:11805834) RGD PMID:11805834 MGI:2681471 NCBI chr 6:125,644,797...125,723,957
Ensembl chr 6:125,644,804...125,723,944
JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:10424889) RGD PMID:10424889 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
EMILIN complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 ISO (PMID:18463100) RGD PMID:18463100 NCBI chr 6:26,821,249...26,829,013
Ensembl chr 6:26,821,255...26,828,972
JBrowse link
extracellular matrix of synaptic cleft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sparcl1 SPARC like 1 IDA PMID:17151913 SynGO PMID:17151913 RGD:13702411 NCBI chr14:6,994,261...7,025,309
Ensembl chr14:6,994,190...7,025,308
JBrowse link
fibrillar collagen trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col27a1 collagen type XXVII alpha 1 chain ISO (MGI:3709703|PMID:17331945) RGD PMID:17331945 MGI:3709703 NCBI chr 5:79,054,004...79,172,442
Ensembl chr 5:79,055,521...79,170,765
JBrowse link
G Lum lumican ISO (PMID:10734230) RGD PMID:10734230 NCBI chr 7:38,820,058...38,826,862
Ensembl chr 7:38,819,771...38,826,862
JBrowse link
interphotoreceptor matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impg1 interphotoreceptor matrix proteoglycan 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:87,733,374...87,879,958
Ensembl chr 8:87,733,545...87,879,888
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:46,615,091...46,693,565
Ensembl chr11:46,615,200...46,693,565
JBrowse link
G Rbp3 retinol binding protein 3 IDA RGD PMID:8282025 RGD:6893658 NCBI chr16:10,277,775...10,286,243
Ensembl chr16:10,277,775...10,286,243
JBrowse link
G Rtbdn retbindin ISO (MGI:5787765|PMID:25542898) RGD PMID:25542898 MGI:5787765 NCBI chr19:26,065,784...26,073,194
Ensembl chr19:26,066,127...26,073,194
JBrowse link
G Vcan versican IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842
JBrowse link
interstitial matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Adamtsl4 ADAMTS-like 4 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:197,803,572...197,815,058
Ensembl chr 2:197,803,584...197,814,808
JBrowse link
G Ccdc80 coiled-coil domain containing 80 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:60,645,660...60,679,249
Ensembl chr11:60,645,086...60,679,555
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain IBA
ISO
PMID:21873635
(MGI:5444801|PMID:22906538)
RGD PMID:22906538, PMID:21873635 MGI:5444801, RGD:13792537 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
G Ecm2 extracellular matrix protein 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr17:15,533,760...15,566,403
Ensembl chr17:15,533,972...15,566,332
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107, MGI:3807344 NCBI chr 2:56,503,002...56,681,334
Ensembl chr 2:56,502,807...56,679,955
JBrowse link
G Igf1 insulin-like growth factor 1 IDA RGD PMID:15544842 RGD:1580475 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 1:264,827,739...264,831,152
Ensembl chr 1:264,827,739...264,831,151
JBrowse link
G Mamdc2 MAM domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:241,071,110...241,223,798
Ensembl chr 1:241,072,072...241,155,537
JBrowse link
G Nav2 neuron navigator 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:104,575,765...104,941,554
Ensembl chr 1:104,576,589...104,941,552
JBrowse link
G Nepn nephrocan IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:33,527,932...33,543,860
Ensembl chr20:33,527,932...33,543,848
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,689,608...3,691,164 JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Tnc tenascin C ISO (MGI:2158011|PMID:11767049) RGD PMID:11767049 MGI:2158011 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Vit vitrin IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:1,091,817...1,208,888
Ensembl chr 6:1,147,012...1,208,392
JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 5:173,216,737...173,221,923
Ensembl chr 5:173,216,741...173,222,440
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:91,201,141...91,348,219
Ensembl chr14:91,201,730...91,348,219
JBrowse link
laminin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 ISO (MGI:67497|PMID:8034675) RGD PMID:8034675 MGI:67497 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lamb1 laminin subunit beta 1 IBA
ISO
PMID:21873635
(MGI:67497|PMID:8034675)
RGD PMID:8034675, PMID:21873635 MGI:67497, RGD:13792537 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamb2 laminin subunit beta 2 IBA
ISO
PMID:21873635
(MGI:67497|PMID:8034675)
RGD PMID:8034675, PMID:21873635 MGI:67497, RGD:13792537 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
G Lamb3 laminin subunit beta 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:112,031,614...112,073,187
Ensembl chr13:112,031,594...112,073,186
JBrowse link
G Ntn4 netrin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:34,533,543...34,649,330
Ensembl chr 7:34,533,543...34,649,481
JBrowse link
G Ntng1 netrin G1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:212,695,464...213,073,046
Ensembl chr 2:212,696,624...212,852,870
JBrowse link
G Ntng2 netrin G2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
laminin-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 ISO UniProtKB:P07942 (PMID:10964500), (PMID:8601594)
(MGI:1095193|PMID:9264260), (MGI:3721838|PMID:17517882)
RGD PMID:8601594, PMID:9264260, PMID:10964500, PMID:17517882 MGI:1095193, MGI:3721838 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lamb1 laminin subunit beta 1 ISO UniProtKB:P25391 (PMID:10964500), (PMID:16289578)
(MGI:1095193|PMID:9264260)
RGD PMID:9264260, PMID:10964500, PMID:16289578 MGI:1095193 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamc1 laminin subunit gamma 1 IDA RGD PMID:8648916 RGD:633159 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
laminin-10 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama5 laminin subunit alpha 5 ISO (PMID:10964500)
PR:P02468|PR:P02469 (MGI:1097278|PMID:9299121)
RGD PMID:9299121, PMID:10964500 MGI:1097278 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb1 laminin subunit beta 1 ISO (PMID:10964500), (PMID:16289578)
PR:P02468|PR:Q61001 (MGI:1097278|PMID:9299121)
RGD PMID:9299121, PMID:10964500, PMID:16289578 MGI:1097278 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamc1 laminin subunit gamma 1 ISO PR:P02469|PR:Q61001 (MGI:1097278|PMID:9299121) RGD PMID:9299121 MGI:1097278 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
laminin-2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 ISO (PMID:16289578) RGD PMID:16289578 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamc2 laminin subunit gamma 2 IDA RGD PMID:9417868 RGD:633095 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
laminin-3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 ISO UniProtKB:P55268 (PMID:10964500) RGD PMID:10964500 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama3 laminin subunit alpha 3 IDA RGD PMID:8923212 RGD:633107 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lamb2 laminin subunit beta 2 IEA
ISO
GO_REF:0000107
(MGI:4829569|PMID:20566382)
UniProtKB:P25391 (PMID:10964500)
Ensembl
RGD
PMID:10964500, PMID:20566382 GO_REF:0000107, MGI:4829569 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
laminin-5 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama3 laminin subunit alpha 3 ISO (MGI:1095193|PMID:9264260) RGD PMID:9264260 MGI:1095193 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lama5 laminin subunit alpha 5 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9417868, PMID:21873635 RGD:633095, RGD:13792537 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb3 laminin subunit beta 3 ISO (MGI:1095193|PMID:9264260) RGD PMID:9264260 MGI:1095193 NCBI chr13:112,031,614...112,073,187
Ensembl chr13:112,031,594...112,073,186
JBrowse link
G Lamc2 laminin subunit gamma 2 ISO (MGI:1095193|PMID:9264260) RGD PMID:9264260 MGI:1095193 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
laminin-8 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 ISO (PMID:16289578) RGD PMID:16289578 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
microfibril term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 ISO (PMID:21402694) RGD PMID:21402694 NCBI chr 7:18,409,147...18,439,012
Ensembl chr 7:18,409,147...18,439,012
JBrowse link
G Adamtsl5 ADAMTS-like 5 colocalizes_with ISO (PMID:23010571) RGD PMID:23010571 NCBI chr 7:12,228,706...12,237,382
Ensembl chr 7:12,229,379...12,234,576
JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:10424889), (PMID:12429738), (PMID:1860873), (PMID:22355679), (PMID:3536967), (PMID:7534784), (PMID:8120105)
(MGI:5698751|PMID:26405179)
RGD PMID:1860873, PMID:3536967, PMID:7534784, PMID:8120105, PMID:10424889, PMID:12429738, PMID:22355679, PMID:26405179 MGI:5698751 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fbn2 fibrillin 2 ISO (PMID:8120105)
(MGI:5523796|PMID:24348270), (MGI:5698751|PMID:26405179)
RGD PMID:8120105, PMID:24348270, PMID:26405179 MGI:5523796, MGI:5698751 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO
IEA
(PMID:12429738)
GO_REF:0000107
RGD
Ensembl
PMID:12429738 GO_REF:0000107 NCBI chr 6:21,203,502...21,600,441
Ensembl chr 6:21,203,502...21,600,451
JBrowse link
G Mfap1a microfibrillar-associated protein 1A ISO (PMID:1374398) RGD PMID:1374398 NCBI chr 3:113,428,855...113,445,435
Ensembl chr 3:113,272,850...113,445,435
JBrowse link
G Mfap2 microfibril associated protein 2 ISO
IBA
(PMID:24353434)
(MGI:5698751|PMID:26405179)
PMID:21873635
RGD PMID:24353434, PMID:26405179, PMID:21873635 MGI:5698751, RGD:13792537 NCBI chr 5:159,534,202...159,539,750
Ensembl chr 5:159,534,202...159,539,750
JBrowse link
G Mfap4 microfibril associated protein 4 ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:47,765,463...47,768,484
Ensembl chr10:47,765,432...47,768,483
JBrowse link
G Mfap5 microfibril associated protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,313,671...155,336,228
Ensembl chr 4:155,313,671...155,336,228
JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 ISO (MGI:4453293|PMID:19940141) RGD PMID:19940141 MGI:4453293 NCBI chr 8:64,811,940...65,413,498
Ensembl chr 8:64,817,191...65,003,296
JBrowse link
perineuronal net term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IDA RGD PMID:18364019 RGD:2315810 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Bcan brevican IDA MMO:0000669 RGD PMID:16644727 RGD:9589827 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Ncan neurocan IDA MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr16:21,050,243...21,076,707
Ensembl chr16:21,050,243...21,076,707
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IDA
ISO
IEA
(MGI:1858374|PMID:10793198)
GO_REF:0000107
RGD
Ensembl
PMID:10793198, PMID:16644727 GO_REF:0000107, MGI:1858374, RGD:9589827 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Tnr tenascin R IEA
ISO
GO_REF:0000107
(MGI:1337730|PMID:10341229)
Ensembl
RGD
PMID:10341229 GO_REF:0000107, MGI:1337730 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link
G Vcan versican IDA MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842
JBrowse link
perisynaptic extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO (MGI:6189263|PMID:27615741) RGD PMID:27615741 MGI:6189263 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Bcan brevican IDA PMID:10414531
PMID:16503162
SynGO PMID:10414531, PMID:16503162 RGD:13702202, RGD:13702210 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Tnc tenascin C ISO (MGI:6189245|PMID:16452087) RGD PMID:16452087 MGI:6189245 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Tnr tenascin R IDA PMID:11598921 SynGO PMID:11598921 RGD:13702357 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      extracellular matrix 426
        Ubisch body 0
        adhesive extracellular matrix 0
        biofilm matrix + 0
        chitin-based extracellular matrix 0
        collagen-containing extracellular matrix + 251
        elastic fiber 4
        fibronectin fibril 0
        microfibril 10
        middle lamella 0
        organomineral extracellular matrix 0
        pollen coat 0
        thrombospondin complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      extracellular region 2608
        extracellular matrix 426
          Ubisch body 0
          adhesive extracellular matrix 0
          biofilm matrix + 0
          chitin-based extracellular matrix 0
          collagen-containing extracellular matrix + 251
          elastic fiber 4
          fibronectin fibril 0
          microfibril 10
          middle lamella 0
          organomineral extracellular matrix 0
          pollen coat 0
          thrombospondin complex 0
paths to the root
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