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ONTOLOGY REPORT - ANNOTATIONS


Term:midbrain development
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Accession:GO:0030901 term browser browse the term
Definition:The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).
Synonyms:exact_synonym: mesencephalon development



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midbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384
JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (MGI:3577153|PMID:15689559) MGI PMID:15689559 MGI:3577153 NCBI chr 5:4,704,155...4,786,011
Ensembl chr 5:4,705,491...4,786,079
JBrowse link
G BARHL1 BarH like homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3708890|PMID:16752387) MGI
Ensembl
PMID:16752387 GO_REF:0000107 MGI:3708890 NCBI chr 9:51,704,590...51,711,726
Ensembl chr 9:51,703,936...51,712,093
JBrowse link
G CMA1 chymase 1 ISO RGD PMID:21396433 RGD:5128663 NCBI chr 8:4,438,244...4,441,189
Ensembl chr 8:4,438,244...4,441,189
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:18436867 RGD:4892032 NCBI chr37:24,831,351...24,846,387
Ensembl chr37:24,843,171...24,844,247
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3722974|PMID:17765678) MGI
Ensembl
PMID:17765678 GO_REF:0000107 MGI:3722974 NCBI chr 4:27,687,223...27,780,007
Ensembl chr 4:27,687,287...27,806,722
JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3525936|PMID:15607945), (MGI:3578062|PMID:15175251) MGI
Ensembl
PMID:15175251 PMID:15607945 GO_REF:0000107 MGI:3525936 MGI:3578062 NCBI chr19:31,124,325...31,129,538 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3525936|PMID:15607945), (MGI:3578062|PMID:15175251) MGI
Ensembl
PMID:15175251 PMID:15607945 GO_REF:0000107 MGI:3525936 MGI:3578062 NCBI chr16:18,358,100...18,365,827 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3719293|PMID:17687036) MGI
Ensembl
PMID:17687036 GO_REF:0000107 MGI:3719293 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3719293|PMID:17687036) MGI
UniProt
PMID:17687036 GO_REF:0000024 MGI:3719293 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792
JBrowse link
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413542|PMID:19842188) MGI
Ensembl
PMID:19842188 GO_REF:0000107 MGI:4413542 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413542|PMID:19842188) MGI
Ensembl
PMID:19842188 GO_REF:0000107 MGI:4413542 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353705|PMID:10693795) MGI
Ensembl
PMID:10693795 GO_REF:0000107 MGI:1353705 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149154|PMID:11500373) MGI
Ensembl
PMID:11500373 GO_REF:0000107 MGI:2149154
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:2149154 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924
JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709911|PMID:17325035) MGI
Ensembl
PMID:17325035 GO_REF:0000107 MGI:3709911 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067
JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5285997|PMID:21752929) MGI
Ensembl
PMID:21752929 GO_REF:0000107 MGI:5285997 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (MGI:5285997|PMID:21752929) MGI PMID:21752929 MGI:5285997 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008) MGI PMID:11029008 MGI:1891551 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046130|PMID:15188430) MGI
Ensembl
PMID:15188430 GO_REF:0000107 MGI:3046130 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447
JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588476|PMID:16020517) MGI
Ensembl
PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191
JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3045667|PMID:15201224), (MGI:4848254|PMID:20816794) MGI
Ensembl
PMID:15201224 PMID:20816794 GO_REF:0000107 MGI:3045667 MGI:4848254 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:3045667|PMID:15201224), (MGI:4848254|PMID:20816794)
(MGI:3045668|PMID:15201223)
(MGI:3578035|PMID:15888661)
MGI PMID:15201223 PMID:15201224 PMID:15888661 PMID:20816794 MGI:3045667 MGI:3045668 MGI:3578035 MGI:4848254 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5285997|PMID:21752929) MGI
Ensembl
PMID:21752929 GO_REF:0000107 MGI:5285997 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351
JBrowse link
G PITX3 paired like homeodomain 3 acts_upstream_of_or_within
involved_in
ISO (MGI:3035846|PMID:14973278), (MGI:3759093|PMID:17919745)
(MGI:3582099|PMID:15950611)
MGI
UniProt
PMID:14973278 PMID:15950611 PMID:17919745 MGI:3035846 MGI:3582099 MGI:3759093 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716
JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within ISO (MGI:2669568|PMID:12925582) MGI PMID:12925582 MGI:2669568 NCBI chr10:31,993,339...32,155,896
Ensembl chr10:31,994,594...32,155,500
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588476|PMID:16020517) MGI
Ensembl
PMID:16020517 GO_REF:0000107 MGI:3588476 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581106|PMID:15899870) MGI
Ensembl
PMID:15899870 GO_REF:0000107 MGI:3581106 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098
JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (MGI:3581106|PMID:15899870) MGI PMID:15899870 MGI:3581106 NCBI chr25:3,768,851...3,844,645
Ensembl chr25:3,779,197...3,841,321
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:26637982) ParkinsonsUK-UCL PMID:26637982 NCBI chr  X:55,693,091...55,764,268
Ensembl chr  X:55,693,194...55,763,683
JBrowse link
G TAL2 TAL bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:1927272|PMID:11071772) MGI PMID:11071772 MGI:1927272 NCBI chr11:61,425,927...61,484,525
Ensembl chr11:61,456,727...61,482,348
JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714
JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572
JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (MGI:4834980|PMID:20614471) ParkinsonsUK-UCL PMID:20614471 MGI:4834980 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:59176|PMID:2205396) MGI
Ensembl
PMID:2205396 GO_REF:0000107 MGI:59176 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413542|PMID:19842188) MGI
Ensembl
PMID:19842188 GO_REF:0000107 MGI:4413542 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413542|PMID:19842188) MGI
Ensembl
PMID:19842188 GO_REF:0000107 MGI:4413542 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
inferior colliculus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792
JBrowse link
G TFAP2D transcription factor AP-2 delta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5295521|PMID:21858141) MGI
Ensembl
PMID:21858141 GO_REF:0000107 MGI:5295521 NCBI chr12:18,447,086...18,504,137
Ensembl chr12:18,447,105...18,504,142
JBrowse link
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSNK1D casein kinase 1 delta involved_in ISO (MGI:3707948|PMID:17244647) ParkinsonsUK-UCL PMID:17244647 MGI:3707948 NCBI chr 9:83,395...110,309
Ensembl chr 9:73,215...110,269
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (MGI:3829860|PMID:18953410), (MGI:5466648|PMID:23109420) ParkinsonsUK-UCL PMID:18953410 PMID:23109420 MGI:3829860 MGI:5466648 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216
JBrowse link
G RYK receptor like tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G WNT9B Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85697|PMID:9030684) MGI
Ensembl
PMID:9030684 GO_REF:0000107 MGI:85697 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063
JBrowse link
negative regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
positive regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PITX3 paired like homeodomain 3 ISO RGD PMID:18385323 RGD:11535083 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716
JBrowse link
G RYK receptor like tyrosine kinase involved_in ISO PMID:23517308 ParkinsonsUK-UCL PMID:23517308 RGD:11054651 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605
JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:4948425|PMID:21347250) ParkinsonsUK-UCL PMID:21347250 MGI:4948425 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496
JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISO (MGI:5448935|PMID:22290867) ParkinsonsUK-UCL PMID:22290867 MGI:5448935 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
substantia nigra development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845
JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr31:21,207,080...21,212,220
Ensembl chr31:21,200,337...21,215,975
JBrowse link
G BASP1 brain abundant membrane attached signal protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:86,360,641...86,417,408
Ensembl chr 4:86,361,608...86,382,715
JBrowse link
G CALM1 calmodulin 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
JBrowse link
G CALM2 calmodulin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457
JBrowse link
G CALM3 calmodulin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
JBrowse link
G CCDC14 coiled-coil domain containing 14 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr33:26,958,752...27,009,159
Ensembl chr33:26,959,430...27,009,436
JBrowse link
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:16,369,878...16,402,302
Ensembl chr26:16,398,886...16,402,021
Ensembl chr26:16,398,886...16,402,021
JBrowse link
G ENO3 enolase 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:31,662,284...31,667,498
Ensembl chr 5:31,662,285...31,834,968
JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (MGI:3696489|PMID:17234579) MGI PMID:17234579 MGI:3696489 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G FGF9 fibroblast growth factor 9 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:3696489|PMID:17234579) MGI PMID:17234579 MGI:3696489 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GNB4 G protein subunit beta 4 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr34:12,818,063...12,849,822
Ensembl chr34:12,822,104...12,876,865
JBrowse link
G H2BC12 H2B clustered histone 12 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr35:24,556,368...24,558,216
Ensembl chr35:24,557,784...24,558,164
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
JBrowse link
G INA internexin neuronal intermediate filament protein alpha involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr28:15,670,919...15,685,080
Ensembl chr28:15,670,999...15,683,380
JBrowse link
G LDHA lactate dehydrogenase A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr21:40,829,844...40,840,947 JBrowse link
G LOC100688796 ATP synthase F(0) complex subunit B1, mitochondrial involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:63,940,486...63,954,982
Ensembl chr 6:40,613,415...40,625,979
Ensembl chr 6:40,613,415...40,625,979
JBrowse link
G LOC100855552 creatine kinase B-type involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC403934 cell division cycle 42 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G LOC612644 cytochrome c oxidase subunit 6B1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:116,960,851...116,969,415 JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386
JBrowse link
G MAOB monoamine oxidase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:37,765,810...37,883,955
Ensembl chr  X:37,765,813...37,883,955
JBrowse link
G MAPKAP1 MAPK associated protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:57,447,115...57,699,979
Ensembl chr 9:57,446,832...57,699,950
JBrowse link
G MBP myelin basic protein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:2,841,801...2,952,553
Ensembl chr 1:2,846,589...2,951,860
JBrowse link
G NDRG2 NDRG family member 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:18,106,651...18,115,026
Ensembl chr15:18,106,654...18,113,970
JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr18:42,069,402...42,075,843
Ensembl chr18:42,069,398...42,076,921
JBrowse link
G PADI2 peptidyl arginine deiminase 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:81,116,031...81,147,889
Ensembl chr 2:81,116,140...81,145,043
JBrowse link
G PLP1 proteolipid protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964
JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:73,372,391...73,393,148
Ensembl chr 4:73,385,566...73,452,033
JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G S100A1 S100 calcium binding protein A1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:43,428,819...43,432,637
Ensembl chr 7:43,428,820...43,433,459
JBrowse link
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:49,027,190...49,060,858
Ensembl chr 9:49,031,669...49,060,848
JBrowse link
G SIRT2 sirtuin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
G SUDS3 SDS3 homolog, SIN3A corepressor complex component involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:14,716,759...14,749,475
Ensembl chr26:14,716,562...15,019,622
JBrowse link
G SYNGR3 synaptogyrin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:38,941,933...38,944,110 JBrowse link
G SYPL2 synaptophysin like 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:42,377,528...42,391,765
Ensembl chr 6:42,380,144...42,385,102
JBrowse link
G TTBK1 tau tubulin kinase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:11,738,466...11,774,663
Ensembl chr12:11,738,232...11,757,814
JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:71,396,694...71,430,395
Ensembl chr 3:71,370,822...71,411,350
JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:45,506,830...45,562,081
Ensembl chr 9:45,507,282...45,562,086
JBrowse link
G YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:24,785,374...24,796,603
Ensembl chr26:24,785,368...24,795,778
JBrowse link
G YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:6,660,504...6,697,954 JBrowse link
G ZNF148 zinc finger protein 148 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr33:28,229,270...28,347,939
Ensembl chr33:28,233,728...28,348,154
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17874
    developmental process 6839
      anatomical structure development 6418
        midbrain development 98
          cell proliferation in midbrain + 8
          corpora quadrigemina development + 2
          midbrain dopaminergic neuron differentiation + 13
          midbrain morphogenesis 1
          substantia nigra development 46
          ventral tegmental area development 0
Path 2
Term Annotations click to browse term
  biological_process 17874
    developmental process 6839
      anatomical structure development 6418
        multicellular organism development 5165
          system development 4490
            nervous system development 2764
              central nervous system development 1201
                brain development 899
                  midbrain development 98
                    cell proliferation in midbrain + 8
                    corpora quadrigemina development + 2
                    midbrain dopaminergic neuron differentiation + 13
                    midbrain morphogenesis 1
                    substantia nigra development 46
                    ventral tegmental area development 0
paths to the root