Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase complex
go back to main search page
Accession:GO:0030880 term browser browse the term
Definition:Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits.
Synonyms:exact_synonym: multisubunit RNA polymerase

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
alpha DNA polymerase:primase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit part_of
located_in		 ISO (MGI:3687659|PMID:10523676)
(MGI:6478526|PMID:8026492), (PMID:9584195)
(PMID:26975377)
(PMID:2175912), (PMID:22465957), (PMID:26975377), (PMID:8026492)		 RGD
ComplexPortal
MGI
UniProt		 PMID:2175912 PMID:7670930 PMID:8026492 PMID:9584195 PMID:10523676 More... MGI:3687659 MGI:6478526 RGD:1580605 NCBI chrNW_004955509:5,007,385...5,319,683
Ensembl chrNW_004955509:5,007,182...5,319,894 		JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit part_of
located_in		 ISO (PMID:22465957), (PMID:26975377), (PMID:8026492)
(MGI:3687659|PMID:10523676)
(MGI:6478526|PMID:8026492), (PMID:9584195)
(PMID:26975377)		 FlyBase
ComplexPortal
MGI		 PMID:8026492 PMID:9584195 PMID:10523676 PMID:22465957 PMID:26975377 MGI:3687659 MGI:6478526 NCBI chrNW_004955422:19,939,971...19,963,753
Ensembl chrNW_004955422:19,939,933...19,963,753 		JBrowse link
G Prim1 DNA primase subunit 1 part_of
located_in		 ISO (MGI:6478526|PMID:8026492)
(MGI:3687659|PMID:10523676)
(PMID:26975377)
(PMID:26975377), (PMID:8026492)		 UniProt
ComplexPortal		 PMID:8026492 PMID:10523676 PMID:26975377 MGI:3687659 MGI:6478526 NCBI chrNW_004955458:4,265,500...4,294,329
Ensembl chrNW_004955458:4,275,517...4,294,257 		JBrowse link
G Prim2 DNA primase subunit 2 part_of
located_in		 ISO (MGI:6478526|PMID:8026492)
(MGI:3687659|PMID:10523676)
(PMID:26975377)
(PMID:26975377), (PMID:8026492)		 UniProt
ComplexPortal		 PMID:8026492 PMID:10523676 PMID:26975377 MGI:3687659 MGI:6478526 NCBI chrNW_004955502:2,642,328...2,898,919
Ensembl chrNW_004955502:2,647,462...2,898,919 		JBrowse link
Cdc73/Paf1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 part_of ISO (PMID:16307923), (PMID:18987311), (PMID:20178742) UniProt PMID:16307923 PMID:18987311 PMID:20178742 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component part_of ISO (PMID:16307923), (PMID:20178742)
(MGI:6203683|PMID:27749823)		 UniProt PMID:16307923 PMID:20178742 PMID:27749823 MGI:6203683 NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component part_of ISO (PMID:16307923), (PMID:18987311), (PMID:20178742) UniProt PMID:16307923 PMID:18987311 PMID:20178742 NCBI chrNW_004955409:2,711,475...2,727,879
Ensembl chrNW_004955409:2,711,564...2,727,755 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component part_of ISO (PMID:16307923), (PMID:20178742)
(MGI:6203683|PMID:27749823)		 UniProt PMID:16307923 PMID:20178742 PMID:27749823 MGI:6203683 NCBI chrNW_004955468:166,477...172,200 JBrowse link
G Pex2 peroxisomal biogenesis factor 2 part_of ISO (PMID:18987311) UniProt PMID:18987311 NCBI chrNW_004955444:3,811,972...3,830,666
Ensembl chrNW_004955444:3,811,973...3,830,666 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component part_of ISO (PMID:20178742)
(MGI:6203683|PMID:27749823)		 UniProt PMID:20178742 PMID:27749823 MGI:6203683 NCBI chrNW_004955416:8,237,439...8,293,802
Ensembl chrNW_004955416:8,237,439...8,293,802 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex part_of ISO (PMID:20178742)
(MGI:6203683|PMID:27749823)		 UniProt PMID:20178742 PMID:27749823 MGI:6203683 NCBI chrNW_004955450:771,646...788,895
Ensembl chrNW_004955450:770,750...789,485 		JBrowse link
core TFIIH complex portion of holo TFIIH complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955482:5,365,669...5,380,047
Ensembl chrNW_004955482:5,365,142...5,380,047 		JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955583:842,750...847,575
Ensembl chrNW_004955583:842,287...847,960 		JBrowse link
RNA polymerase I complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr1a RNA polymerase I subunit A part_of ISO (PMID:15226435), (PMID:9236775)
(PMID:34671025), (PMID:36271492)		 RGD
MGI
UniProt		 PMID:9236775 PMID:9422795 PMID:15226435 PMID:34671025 PMID:36271492 RGD:2312782 NCBI chrNW_004955424:1,507,935...1,595,068
Ensembl chrNW_004955424:1,508,037...1,593,108 		JBrowse link
G Polr1b RNA polymerase I subunit B part_of ISO (PMID:9236775)
(PMID:34671025), (PMID:36271492)		 RGD
MGI
UniProt		 PMID:9236775 PMID:9422795 PMID:34671025 PMID:36271492 RGD:2312782 NCBI chrNW_004955470:1,714,156...1,737,749
Ensembl chrNW_004955470:1,714,156...1,737,820 		JBrowse link
G Polr1c RNA polymerase I and III subunit C part_of ISO (PMID:34671025), (PMID:36271492)
(PMID:7929437)		 UniProt
MGI		 PMID:7929437 PMID:34671025 PMID:36271492 NCBI chrNW_004955437:9,346,397...9,350,591
Ensembl chrNW_004955437:9,346,397...9,350,591 		JBrowse link
G Polr1d RNA polymerase I and III subunit D part_of ISO (PMID:34671025), (PMID:36271492)
(PMID:15226435)		 UniProt
MGI		 PMID:15226435 PMID:34671025 PMID:36271492 NCBI chrNW_004955497:7,029,556...7,030,128
Ensembl chrNW_004955497:7,029,557...7,029,931 		JBrowse link
G Polr1e RNA polymerase I subunit E part_of ISO (PMID:16809778), (PMID:34671025), (PMID:36271492)
(PMID:8641287)		 UniProt
MGI		 PMID:8641287 PMID:16809778 PMID:34671025 PMID:36271492 NCBI chrNW_004955419:28,970,982...28,983,862
Ensembl chrNW_004955419:28,967,083...28,983,862 		JBrowse link
G Polr1f RNA polymerase I subunit F part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955410:22,435,136...22,442,839
Ensembl chrNW_004955410:22,434,704...22,442,862 		JBrowse link
G Polr1g RNA polymerase I subunit G part_of ISO (PMID:16809778), (PMID:34671025), (PMID:36271492)
(PMID:15226435)		 UniProt
MGI		 PMID:15226435 PMID:16809778 PMID:34671025 PMID:36271492 NCBI chrNW_004955555:2,389,569...2,393,410
Ensembl chrNW_004955555:2,391,106...2,393,369 		JBrowse link
G Polr1h RNA polymerase I subunit H part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955583:191,252...195,563
Ensembl chrNW_004955583:191,564...195,358 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955495:6,779,557...6,788,241 JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO (PMID:34671025), (PMID:36271492) UniProt PMID:34671025 PMID:36271492 NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536 		JBrowse link
RNA polymerase II, core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr2a RNA polymerase II subunit A part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955467:9,423,540...9,447,530
Ensembl chrNW_004955467:9,421,256...9,447,530 		JBrowse link
G Polr2b RNA polymerase II subunit B part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955447:14,110,182...14,150,556
Ensembl chrNW_004955447:14,110,182...14,150,556 		JBrowse link
G Polr2c RNA polymerase II subunit C part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955433:15,096,324...15,104,435
Ensembl chrNW_004955433:15,096,324...15,111,846 		JBrowse link
G Polr2d RNA polymerase II subunit D part_of ISO (PMID:9528765), (PMID:9852112) UniProt PMID:9528765 PMID:9852112 NCBI chrNW_004955459:2,687,005...2,696,388
Ensembl chrNW_004955459:2,686,792...2,696,388 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955495:6,779,557...6,788,241 JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166 		JBrowse link
G Polr2g RNA polymerase II subunit G part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955599:469,233...471,761
Ensembl chrNW_004955599:464,879...471,976 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800 		JBrowse link
G Polr2i RNA polymerase II subunit I part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955468:2,494,120...2,495,578
Ensembl chrNW_004955468:2,494,120...2,495,578 		JBrowse link
G Polr2j RNA polymerase II subunit J part_of ISO (PMID:9852112)
(PMID:9099876)		 UniProt
MGI		 PMID:9099876 PMID:9852112 NCBI chrNW_004955456:15,146,713...15,151,320
Ensembl chrNW_004955456:15,146,713...15,151,311 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536 		JBrowse link
G Polr2m RNA polymerase II subunit M part_of ISO (PMID:30190596) FlyBase PMID:30190596 NCBI chrNW_004955450:16,633,975...16,642,085
Ensembl chrNW_004955450:16,635,458...16,641,974 		JBrowse link
RNA polymerase III complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crcp CGRP receptor component part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955456:8,431,161...8,479,866
Ensembl chrNW_004955456:8,431,161...8,483,181 		JBrowse link
G Polr1c RNA polymerase I and III subunit C part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) MGI PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955437:9,346,397...9,350,591
Ensembl chrNW_004955437:9,346,397...9,350,591 		JBrowse link
G Polr1d RNA polymerase I and III subunit D part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955497:7,029,556...7,030,128
Ensembl chrNW_004955497:7,029,557...7,029,931 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955495:6,779,557...6,788,241 JBrowse link
G Polr2f RNA polymerase II, I and III subunit F part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536 		JBrowse link
G Polr3a RNA polymerase III subunit A part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955437:14,446,059...14,483,336
Ensembl chrNW_004955437:14,446,024...14,483,336 		JBrowse link
G Polr3b RNA polymerase III subunit B part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955405:40,353,289...40,451,445
Ensembl chrNW_004955405:40,353,281...40,451,479 		JBrowse link
G Polr3c RNA polymerase III subunit C part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955568:242,834...263,053
Ensembl chrNW_004955568:243,073...261,418 		JBrowse link
G Polr3d RNA polymerase III subunit D part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) MGI PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955403:45,721,266...45,727,214
Ensembl chrNW_004955403:45,721,266...45,727,214 		JBrowse link
G Polr3e RNA polymerase III subunit E part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955493:933,381...962,314
Ensembl chrNW_004955493:933,381...962,314 		JBrowse link
G Polr3f RNA polymerase III subunit F part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955415:27,022,081...27,036,475
Ensembl chrNW_004955415:27,022,081...27,036,475 		JBrowse link
G Polr3g RNA polymerase III subunit G part_of ISO (PMID:24107381), (PMID:33335104), (PMID:34675218) UniProt PMID:24107381 PMID:33335104 PMID:34675218 NCBI chrNW_004955418:21,116,812...21,149,818 JBrowse link
G Polr3gl RNA polymerase III subunit GL part_of ISO (PMID:24107381) MGI PMID:24107381 NCBI chrNW_004955568:120,475...129,990
Ensembl chrNW_004955568:120,475...129,990 		JBrowse link
G Polr3h RNA polymerase III subunit H part_of ISO (PMID:12391170), (PMID:33335104), (PMID:34675218) UniProt PMID:12391170 PMID:33335104 PMID:34675218 NCBI chrNW_004955413:27,065,785...27,072,432
Ensembl chrNW_004955413:27,065,785...27,072,432 		JBrowse link
G Polr3k RNA polymerase III subunit K part_of ISO (PMID:33335104), (PMID:34675218) UniProt PMID:33335104 PMID:34675218 NCBI chrNW_004955442:17,101,585...17,106,689
Ensembl chrNW_004955442:17,101,585...17,106,689 		JBrowse link
RNA-directed RNA polymerase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tert telomerase reverse transcriptase part_of ISO (PMID:19701182) BHF-UCL PMID:19701182 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589 		JBrowse link
TERT-RMRP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tert telomerase reverse transcriptase part_of
located_in		 ISO (PMID:19701182) BHF-UCL
ComplexPortal		 PMID:19701182 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589 		JBrowse link
transcription factor TFIIA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2a1 general transcription factor IIA subunit 1 part_of
located_in		 ISO (PMID:7724559)
(PMID:15927180)
(PMID:8626665)		 BHF-UCL
MGI
ComplexPortal		 PMID:7724559 PMID:8626665 PMID:15927180 NCBI chrNW_004955438:4,787,190...4,825,578
Ensembl chrNW_004955438:4,787,190...4,825,577 		JBrowse link
G Gtf2a1l general transcription factor IIA subunit 1 like part_of ISO (PMID:15927180) MGI PMID:15927180 NCBI chrNW_004955441:15,142,906...15,193,089
Ensembl chrNW_004955441:15,142,216...15,192,976 		JBrowse link
G Gtf2a2 general transcription factor IIA subunit 2 part_of
located_in		 ISO (PMID:7724559), (PMID:7958899), (PMID:7958900)
(PMID:8626665)		 BHF-UCL
ComplexPortal		 PMID:7724559 PMID:7958899 PMID:7958900 PMID:8626665 NCBI chrNW_004955450:15,181,824...15,195,594 JBrowse link
G Tbp TATA-box binding protein part_of ISO (PMID:7724559) BHF-UCL PMID:7724559 NCBI chrNW_004955411:3,268,147...3,285,567
Ensembl chrNW_004955411:3,268,147...3,285,077 		JBrowse link
G Tbpl1 TATA-box binding protein like 1 part_of ISO (PMID:15927180) MGI PMID:15927180 NCBI chrNW_004955439:2,539,465...2,548,351
Ensembl chrNW_004955439:2,539,486...2,563,720 		JBrowse link
transcription factor TFIID complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576 		JBrowse link
G Gtf2a1 general transcription factor IIA subunit 1 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955438:4,787,190...4,825,578
Ensembl chrNW_004955438:4,787,190...4,825,577 		JBrowse link
G Gtf2a2 general transcription factor IIA subunit 2 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955450:15,181,824...15,195,594 JBrowse link
G Gtf2b general transcription factor IIB part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955423:5,420,795...5,447,148
Ensembl chrNW_004955423:5,420,584...5,447,148 		JBrowse link
G Gtf2e1 general transcription factor IIE subunit 1 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955427:20,242,326...20,273,314
Ensembl chrNW_004955427:20,241,774...20,273,551 		JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955463:7,000,868...7,080,778
Ensembl chrNW_004955463:7,000,868...7,084,207 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955495:3,208,334...3,217,460
Ensembl chrNW_004955495:3,208,733...3,217,163 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955482:5,365,669...5,380,047
Ensembl chrNW_004955482:5,365,142...5,380,047 		JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955583:842,750...847,575
Ensembl chrNW_004955583:842,287...847,960 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955439:4,226,530...4,234,390
Ensembl chrNW_004955439:4,226,530...4,234,261 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 part_of
located_in		 ISO (PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:8625415)
(PMID:23332750)		 ParkinsonsUK-UCL
ComplexPortal		 PMID:8625415 PMID:14580349 PMID:23332750 PMID:24927529 PMID:25412659 More... NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of
located_in		 ISO (PMID:14580349), (PMID:15099517), (PMID:29111974), (PMID:7729427), (PMID:7923369)
(PMID:23332750)		 MGI
ComplexPortal		 PMID:7729427 PMID:7923369 PMID:14580349 PMID:15099517 PMID:23332750 More... NCBI chrNW_004955414:22,322,954...22,324,412
Ensembl chrNW_004955414:22,323,031...22,324,367 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 part_of
located_in		 ISO (PMID:14580349), (PMID:29111974), (PMID:7729427), (PMID:8670810)
(PMID:23332750)		 ARUK-UCL
ComplexPortal		 PMID:7729427 PMID:8670810 PMID:14580349 PMID:23332750 PMID:29111974 NCBI chrNW_004955437:2,908,939...2,916,154
Ensembl chrNW_004955437:2,908,939...2,916,154 		JBrowse link
G Taf13 TATA-box binding protein associated factor 13 part_of
located_in		 ISO (PMID:29111974), (PMID:7729427)
(PMID:23332750)		 ARUK-UCL
ComplexPortal		 PMID:7729427 PMID:23332750 PMID:29111974 NCBI chrNW_004955435:12,488,578...12,496,894
Ensembl chrNW_004955435:12,486,126...12,496,894 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of
located_in		 ISO (PMID:10409744), (PMID:14580349), (PMID:27007846), (PMID:29111974), (PMID:9774672)
(PMID:23332750)		 UniProt
ComplexPortal		 PMID:9774672 PMID:10409744 PMID:14580349 PMID:23332750 PMID:27007846 More... NCBI chrNW_004955417:25,457,615...25,515,923 JBrowse link
G Taf3 TATA-box binding protein associated factor 3 part_of
located_in		 ISO (PMID:11438666), (PMID:29111974)
(PMID:23332750)		 MGI
ComplexPortal		 PMID:11438666 PMID:23332750 PMID:29111974 NCBI chrNW_004955421:24,263,395...24,414,472 JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of
located_in		 ISO (PMID:14580349), (PMID:29111974)
(PMID:23332750)		 ARUK-UCL
ComplexPortal		 PMID:14580349 PMID:23332750 PMID:29111974 NCBI chrNW_004955528:1,951,952...2,020,592
Ensembl chrNW_004955528:1,994,249...2,020,494 		JBrowse link
G Taf4b TATA-box binding protein associated factor 4b part_of ISO (PMID:29111974) ARUK-UCL PMID:29111974 NCBI chrNW_004955402:14,296,202...14,425,298
Ensembl chrNW_004955402:14,296,202...14,425,321 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of
located_in		 ISO (PMID:14580349), (PMID:29111974), (PMID:9045704)
(PMID:23332750)		 UniProt
ComplexPortal		 PMID:9045704 PMID:14580349 PMID:23332750 PMID:29111974 NCBI chrNW_004955485:7,159,199...7,176,269
Ensembl chrNW_004955485:7,160,022...7,175,608 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of
located_in		 ISO (PMID:14580349), (PMID:27007846), (PMID:29111974), (PMID:8262073)
(PMID:23332750)		 UniProt
ComplexPortal		 PMID:8262073 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 NCBI chrNW_004955573:752,646...759,292
Ensembl chrNW_004955573:752,601...759,292 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of
located_in		 ISO (PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:7824954)
(PMID:10438527), (PMID:28893950)
(PMID:23332750)		 ParkinsonsUK-UCL
MGI
ComplexPortal		 PMID:7824954 PMID:10438527 PMID:14580349 PMID:23332750 PMID:24927529 More... NCBI chrNW_004955415:12,453,655...12,456,070
Ensembl chrNW_004955415:12,453,655...12,456,070 		JBrowse link
G Taf8 TATA-box binding protein associated factor 8 part_of
located_in		 ISO (PMID:14580349), (PMID:27007846), (PMID:29111974)
(PMID:23332750)		 UniProt
ComplexPortal		 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 NCBI chrNW_004955437:8,317,437...8,328,544
Ensembl chrNW_004955437:8,317,437...8,328,804 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of
located_in		 ISO (PMID:14580349), (PMID:15899866), (PMID:29111974)
(PMID:23332750)		 ARUK-UCL
ComplexPortal		 PMID:14580349 PMID:15899866 PMID:23332750 PMID:29111974 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272 		JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO (PMID:15899866), (PMID:29111974) UniProt PMID:15899866 PMID:29111974 NCBI chrNW_004955557:1,607,589...1,617,748
Ensembl chrNW_004955557:1,605,669...1,617,999 		JBrowse link
G Tbp TATA-box binding protein part_of
located_in		 ISO (PMID:28893950)
(PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:27193682), (PMID:29111974), (PMID:7729427)		 RGD
MGI
ComplexPortal
UniProt		 PMID:7729427 PMID:7980586 PMID:14580349 PMID:23332750 PMID:27007846 More... RGD:2306552 NCBI chrNW_004955411:3,268,147...3,285,567
Ensembl chrNW_004955411:3,268,147...3,285,077 		JBrowse link
G Tcea1 transcription elongation factor A1 part_of ISO (PMID:27193682) UniProt PMID:27193682 NCBI chrNW_004955454:13,312,823...13,347,128
Ensembl chrNW_004955454:13,312,823...13,347,129 		JBrowse link
transcription factor TFIIF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2f1 general transcription factor IIF subunit 1 located_in ISO (PMID:11183778) ComplexPortal PMID:11183778 NCBI chrNW_004955495:3,208,334...3,217,460
Ensembl chrNW_004955495:3,208,733...3,217,163 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 located_in ISO (PMID:11183778) ComplexPortal PMID:11183778 NCBI chrNW_004955518:2,912,259...3,064,298
Ensembl chrNW_004955518:2,912,259...3,064,298 		JBrowse link
transcription factor TFIIH holo complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955418:23,790,398...23,807,509
Ensembl chrNW_004955418:23,790,001...23,807,702 		JBrowse link
G Cdk7 cyclin dependent kinase 7 part_of ISO (PMID:9852112) RGD
UniProt		 PMID:7553866 PMID:9852112 RGD:9590319 NCBI chrNW_004955446:54,401...87,884
Ensembl chrNW_004955446:54,448...90,191 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 ISO RGD PMID:7553866 RGD:9590319 NCBI chrNW_004955518:2,912,259...3,064,298
Ensembl chrNW_004955518:2,912,259...3,064,298 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 part_of ISO (PMID:9852112) RGD
UniProt		 PMID:7553866 PMID:9852112 RGD:9590319 NCBI chrNW_004955414:33,028,701...33,063,233
Ensembl chrNW_004955414:33,028,701...33,063,233 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955482:5,365,669...5,380,047
Ensembl chrNW_004955482:5,365,142...5,380,047 		JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955583:842,750...847,575
Ensembl chrNW_004955583:842,287...847,960 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO (PMID:9852112) UniProt PMID:9852112 NCBI chrNW_004955466:8,690,960...8,895,021
Ensembl chrNW_004955466:8,690,960...8,895,021 		JBrowse link
transcription factor TFIIK complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnh cyclin H part_of ISO (PMID:8692841)
(PMID:23393140)		 UniProt PMID:8692841 PMID:23393140 NCBI chrNW_004955418:23,790,398...23,807,509
Ensembl chrNW_004955418:23,790,001...23,807,702 		JBrowse link
G Cdk7 cyclin dependent kinase 7 part_of ISO (PMID:8692841)
(PMID:23393140)		 UniProt PMID:8692841 PMID:23393140 NCBI chrNW_004955446:54,401...87,884
Ensembl chrNW_004955446:54,448...90,191 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase part_of ISO (PMID:8692841) UniProt PMID:8692841 NCBI chrNW_004955466:8,690,960...8,895,021
Ensembl chrNW_004955466:8,690,960...8,895,021 		JBrowse link
transcription factor TFTC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955437:10,207,802...10,649,559
Ensembl chrNW_004955437:10,258,783...10,649,590 		JBrowse link
G Tada3 transcriptional adaptor 3 part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955561:1,304,222...1,314,092
Ensembl chrNW_004955561:1,304,232...1,348,121 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of ISO (PMID:10373431), (PMID:9603525) UniProt PMID:9603525 PMID:10373431 NCBI chrNW_004955414:22,322,954...22,324,412
Ensembl chrNW_004955414:22,323,031...22,324,367 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955417:25,457,615...25,515,923 JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of ISO (PMID:10373431), (PMID:9603525) UniProt PMID:9603525 PMID:10373431 NCBI chrNW_004955528:1,951,952...2,020,592
Ensembl chrNW_004955528:1,994,249...2,020,494 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of ISO (PMID:10373431), (PMID:9603525) UniProt PMID:9603525 PMID:10373431 NCBI chrNW_004955485:7,159,199...7,176,269
Ensembl chrNW_004955485:7,160,022...7,175,608 		JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955492:8,478,147...8,515,988
Ensembl chrNW_004955492:8,479,194...8,517,105 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of ISO (PMID:9603525) UniProt PMID:9603525 NCBI chrNW_004955573:752,646...759,292
Ensembl chrNW_004955573:752,601...759,292 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of ISO (PMID:9603525) UniProt PMID:9603525 NCBI chrNW_004955415:12,453,655...12,456,070
Ensembl chrNW_004955415:12,453,655...12,456,070 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of ISO (PMID:15899866) UniProt PMID:15899866 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272 		JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO (PMID:15899866) UniProt PMID:15899866 NCBI chrNW_004955557:1,607,589...1,617,748
Ensembl chrNW_004955557:1,605,669...1,617,999 		JBrowse link
G Trrap transformation/transcription domain associated protein part_of ISO (PMID:10373431) UniProt PMID:10373431 NCBI chrNW_004955460:14,641,891...14,761,641
Ensembl chrNW_004955460:14,644,133...14,760,787 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12554
    protein-containing complex 4416
      intracellular protein-containing complex 730
        RNA polymerase complex 83
          DNA-directed RNA polymerase complex + 82
          RNA-directed RNA polymerase complex + 1
Path 2
Term Annotations click to browse term
  cellular_component 12554
    protein-containing complex 4416
      catalytic complex 1326
        transferase complex 662
          transferase complex, transferring phosphorus-containing groups 217
            RNA polymerase complex 83
              DNA-directed RNA polymerase complex + 82
              RNA-directed RNA polymerase complex + 1
paths to the root