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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical actin cytoskeleton organization
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Accession:GO:0030866 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: actin cortex stabilization;   cortical actin cytoskeleton organisation;   cortical actin cytoskeleton stabilization
 related_synonym: cortical actin cytoskeleton organization and biogenesis;   cortical resistance
 alt_id: GO:0033109



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cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP11 A-kinase anchoring protein 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27402760) Ensembl
MGI
PMID:27402760 GO_REF:0000107 NCBI chr11:24,702,157...24,752,410
Ensembl chr11:24,704,881...24,752,244
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,697,582...179,717,299
Ensembl chr 1:179,713,299...179,717,841
JBrowse link
G CALR calreticulin acts_upstream_of_or_within ISO (PMID:15136153) MGI PMID:15136153 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,229...66,102,132
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24069528) Ensembl
MGI
PMID:24069528 GO_REF:0000107 NCBI chr 9:3,378,144...3,379,851
Ensembl chr 9:3,378,207...3,379,847
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chr18:6,166,914...6,171,157 JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841
JBrowse link
G EHD2 EH domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15247266) Ensembl
MGI
PMID:15247266 GO_REF:0000107 NCBI chr 6:53,423,489...53,442,007
Ensembl chr 6:53,423,563...53,443,224
JBrowse link
G EPB41 erythrocyte membrane protein band 4.1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:85,842,538...86,029,522
Ensembl chr 6:85,865,277...86,029,508
JBrowse link
G EPB41L1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,360,388...39,495,064
Ensembl chr17:39,326,627...39,495,061
JBrowse link
G EPB41L2 erythrocyte membrane protein band 4.1 like 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:32,418,210...32,630,643
Ensembl chr 1:32,418,217...32,630,638
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:101,420,376...101,671,177
Ensembl chr 6:101,420,396...101,671,169
JBrowse link
G FHOD1 formin homology 2 domain containing 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:27,867,499...27,883,077
Ensembl chr 6:27,867,502...27,883,079
JBrowse link
G FHOD3 formin homology 2 domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:120,036,824...120,585,987
Ensembl chr 6:120,036,845...120,586,816
JBrowse link
G FMNL1 formin like 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:18,198,764...18,225,621
Ensembl chr12:18,198,769...18,225,365
JBrowse link
G FMNL2 formin like 2 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:60,054,300...60,384,666
Ensembl chr15:60,053,877...60,384,655
JBrowse link
G FMNL3 formin like 3 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:15,592,665...15,646,059
Ensembl chr 5:15,592,666...15,646,046
JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,289,607...11,348,557
Ensembl chr17:11,289,690...11,348,549
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,487,337...60,500,423
Ensembl chr12:60,487,343...60,500,447
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:5,809,066...5,846,165
Ensembl chr12:5,809,069...5,846,162
JBrowse link
G NCKAP1 NCK associated protein 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:88,425,861...88,528,417
Ensembl chr15:88,425,142...88,528,326
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:19,677,613...19,720,550
Ensembl chr 5:19,677,875...19,723,132
JBrowse link
G PLEK pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,877,741...73,910,163
Ensembl chr 3:73,877,743...73,906,667
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 4:95,705,093...95,709,942
Ensembl chr 4:95,705,220...95,711,729
JBrowse link
G RHOQ ras homolog family member Q involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:93,970,545...94,012,660
Ensembl chr 3:93,973,653...94,012,580
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362
JBrowse link
G STRIP1 striatin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:110,061,596...110,081,017
Ensembl chr 4:110,061,604...110,080,822
JBrowse link
G TLN1 talin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chr 1:236,416,041...236,450,978
Ensembl chr 1:236,416,044...236,450,922
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416
JBrowse link
actin cortical patch assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCKIPSD NCK interacting protein with SH3 domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:31,366,574...31,377,684
Ensembl chr13:31,363,765...31,377,672
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin, actin binding protein involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr18:37,647,952...37,710,939
Ensembl chr18:37,647,961...37,708,575
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr13:19,597,064...19,664,047
Ensembl chr13:19,597,059...19,665,996
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,894,314...15,943,619
Ensembl chr 5:15,904,712...15,943,609
JBrowse link
G RTKN rhotekin involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:68,598,560...68,613,633
Ensembl chr 3:68,598,249...68,613,631
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:696,355...753,859
Ensembl chr 4:689,034...753,696
JBrowse link
mitotic actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CETN3 centrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:97,574,003...97,593,320
Ensembl chr 2:97,572,449...97,593,291
JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:53,020,479...53,129,964
Ensembl chr 7:52,958,106...53,129,958
JBrowse link
G IQGAP2 IQ motif containing GTPase activating protein 2 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:85,294,423...85,633,645
Ensembl chr 2:85,294,530...85,633,642
JBrowse link
G IQGAP3 IQ motif containing GTPase activating protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:93,495,999...93,556,915
Ensembl chr 4:93,513,187...93,559,001
JBrowse link
G ZNF774 zinc finger protein 774 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:52,985,669...52,994,797
Ensembl chr 7:52,958,106...53,129,958
JBrowse link
mitotic actomyosin contractile ring contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:59,466,778...59,705,602
Ensembl chr12:59,466,791...59,654,192
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECT2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:111,248,215...111,310,746
Ensembl chr13:111,248,131...111,314,828
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,403,362...8,452,750
Ensembl chr 1:8,403,453...8,452,742
JBrowse link
G PLS1 plastin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19321664) Ensembl
MGI
PMID:19321664 GO_REF:0000107 NCBI chr13:83,307,692...83,434,133
Ensembl chr13:83,308,007...83,434,128
JBrowse link
G VIL1 villin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,463,470...120,494,772
Ensembl chr15:120,463,566...120,492,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    cellular process 16883
      actin filament-based process 847
        actin cytoskeleton organization 760
          cortical actin cytoskeleton organization 45
            actin cortical patch assembly + 1
            actin cortical patch organization + 1
            actomyosin contractile ring organization + 12
            assembly of apicomedial cortex actomyosin 0
            terminal web assembly 3
Path 2
Term Annotations click to browse term
  biological_process 17813
    cellular process 16883
      cellular component organization or biogenesis 6721
        cellular component organization 6506
          organelle organization 3624
            cytoskeleton organization 1545
              actin cytoskeleton organization 760
                cortical actin cytoskeleton organization 45
                  actin cortical patch assembly + 1
                  actin cortical patch organization + 1
                  actomyosin contractile ring organization + 12
                  assembly of apicomedial cortex actomyosin 0
                  terminal web assembly 3
paths to the root