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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical actin cytoskeleton organization
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Accession:GO:0030866 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: actin cortex stabilization;   cortical actin cytoskeleton organisation;   cortical actin cytoskeleton stabilization
 related_synonym: cortical actin cytoskeleton organization and biogenesis;   cortical resistance
 alt_id: GO:0033109


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cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap11 A-kinase anchoring protein 11 acts_upstream_of_or_within ISO (PMID:27402760) MGI PMID:27402760 NCBI chrNW_004624748:12,769,698...12,820,815
Ensembl chrNW_004624748:12,770,056...12,812,976
JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:18,880,065...18,883,456
Ensembl chrNW_004624731:18,882,690...18,883,217
JBrowse link
G Calr calreticulin acts_upstream_of_or_within ISO (PMID:15136153) MGI PMID:15136153 NCBI chrNW_004624901:511,295...515,208
Ensembl chrNW_004624901:511,052...516,757
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24069528) Ensembl
MGI
PMID:24069528 GO_REF:0000107 NCBI chrNW_004624817:7,836,671...7,838,590
Ensembl chrNW_004624817:7,836,557...7,838,718
JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:14699157) UniProt PMID:14699157 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Ehd2 EH domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15247266) Ensembl
MGI
PMID:15247266 GO_REF:0000107 NCBI chrNW_004624832:6,156,051...6,168,638
Ensembl chrNW_004624832:6,155,839...6,168,628
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624764:12,692,114...12,896,252
Ensembl chrNW_004624764:12,770,814...12,892,540
JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624842:3,265,880...3,443,535
Ensembl chrNW_004624842:3,265,880...3,459,412
JBrowse link
G Epb41l2 erythrocyte membrane protein band 4.1 like 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624753:5,023,970...5,240,063
Ensembl chrNW_004624753:5,023,970...5,146,595
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624770:15,092,706...15,303,990
Ensembl chrNW_004624770:15,094,969...15,287,128
JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:19,072,775...19,090,561
Ensembl chrNW_004624746:19,074,290...19,090,337
JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624779:10,562,319...11,069,557
Ensembl chrNW_004624779:10,562,296...11,069,694
JBrowse link
G Fmnl1 formin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:216,328...249,903
Ensembl chrNW_004624795:216,551...233,127
JBrowse link
G Fmnl2 formin like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624866:4,434,956...4,738,599
Ensembl chrNW_004624866:4,436,967...4,738,979
JBrowse link
G Fmnl3 formin like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:2,555,082...2,616,295
Ensembl chrNW_004624816:2,555,069...2,616,295
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:922,524...978,687
Ensembl chrNW_004624780:923,744...970,519
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,227,518...3,245,137
Ensembl chrNW_004624849:3,227,758...3,245,118
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:5,329,988...5,376,368
Ensembl chrNW_004624801:5,329,916...5,370,345
JBrowse link
G Nckap1 NCK associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624844:4,679,840...4,773,617
Ensembl chrNW_004624844:4,676,741...4,773,538
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
JBrowse link
G Plek pleckstrin involved_in ISO (PMID:10497244) BHF-UCL PMID:10497244 NCBI chrNW_004624762:4,939,683...4,967,327
Ensembl chrNW_004624762:4,939,599...4,967,371
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chrNW_004624885:3,239,581...3,243,539
Ensembl chrNW_004624885:3,239,595...3,243,539
JBrowse link
G Rhoq ras homolog family member Q involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:27,997,493...28,031,840 JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:10,592,304...10,731,640 JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Strip1 striatin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:5,802,389...5,821,695
Ensembl chrNW_004624772:5,802,065...5,822,901
JBrowse link
G Tln1 talin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chrNW_004624868:5,061,108...5,095,433
Ensembl chrNW_004624868:5,061,290...5,095,661
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
actin cortical patch assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckipsd NCK interacting protein with SH3 domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:2,685,256...2,695,387
Ensembl chrNW_004624730:2,684,762...2,695,705
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin actin binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:24,756,633...24,831,168
Ensembl chrNW_004624740:24,756,234...24,830,978
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chrNW_004624788:11,772,268...11,849,040
Ensembl chrNW_004624788:11,772,396...11,845,765
JBrowse link
G Racgap1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:2,268,879...2,303,305
Ensembl chrNW_004624816:2,273,856...2,303,375
JBrowse link
G Rtkn rhotekin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:29,061,202...29,077,928
Ensembl chrNW_004624749:29,060,934...29,076,451
JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:17,703,113...17,797,922
Ensembl chrNW_004624768:17,702,728...17,799,022
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624869:888,868...1,172,747
Ensembl chrNW_004624869:889,091...1,171,983
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:1,730,079...1,765,250
Ensembl chrNW_004624885:1,730,771...1,765,180
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ect2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:50,773,465...50,841,427
Ensembl chrNW_004624730:50,773,566...50,840,510
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chrNW_004624929:827,275...873,743
Ensembl chrNW_004624929:826,531...873,572
JBrowse link
G Pls1 plastin 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5621262|PMID:22114352)
(PMID:19321664)
UniProt
MGI
PMID:19321664 PMID:22114352 MGI:5621262 NCBI chrNW_004624730:19,164,360...19,302,369
Ensembl chrNW_004624730:19,163,783...19,302,222
JBrowse link
G Vil1 villin 1 involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chrNW_004624823:6,567,107...6,593,258
Ensembl chrNW_004624823:6,566,687...6,588,599
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15028
    cellular process 14201
      actin filament-based process 756
        actin cytoskeleton organization 673
          cortical actin cytoskeleton organization 41
            actin cortical patch assembly + 1
            actin cortical patch organization + 1
            actomyosin contractile ring organization + 8
            assembly of apicomedial cortex actomyosin 0
            terminal web assembly 3
Path 2
Term Annotations click to browse term
  biological_process 15028
    cellular process 14201
      cellular component organization or biogenesis 6160
        cellular component organization 5960
          organelle organization 3349
            cytoskeleton organization 1384
              actin cytoskeleton organization 673
                cortical actin cytoskeleton organization 41
                  actin cortical patch assembly + 1
                  actin cortical patch organization + 1
                  actomyosin contractile ring organization + 8
                  assembly of apicomedial cortex actomyosin 0
                  terminal web assembly 3
paths to the root