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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical actin cytoskeleton organization
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Accession:GO:0030866 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: actin cortex stabilization;   cortical actin cytoskeleton organisation;   cortical actin cytoskeleton stabilization
 related_synonym: cortical actin cytoskeleton organization and biogenesis;   cortical resistance
 alt_id: GO:0033109



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cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap11 A kinase (PRKA) anchor protein 11 acts_upstream_of_or_within IMP (MGI:5792167|PMID:27402760) MGI PMID:27402760 MGI:5792167 NCBI chr14:78,729,686...78,774,306
Ensembl chr14:78,729,686...78,774,248
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:69,418,924...69,422,754
Ensembl chr12:69,418,924...69,420,557
JBrowse link
G Calr calreticulin acts_upstream_of_or_within IDA (MGI:3051936|PMID:15136153) MGI PMID:15136153 MGI:3051936 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563
JBrowse link
G Cavin3 caveolae associated 3 acts_upstream_of_or_within IMP (MGI:5518817|PMID:24069528) MGI PMID:24069528 MGI:5518817 NCBI chr 7:105,129,823...105,131,404
Ensembl chr 7:105,129,290...105,131,507
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in ISO RGD
MGI
PMID:15331630 GO_REF:0000096 MGI:4417868 RGD:1598417 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947
JBrowse link
G Ehd2 EH-domain containing 2 acts_upstream_of_or_within IDA (MGI:3056883|PMID:15247266) MGI PMID:15247266 MGI:3056883 NCBI chr 7:15,680,883...15,701,460
Ensembl chr 7:15,680,883...15,701,492
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:131,650,724...131,802,824
Ensembl chr 4:131,650,724...131,802,632
JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:156,255,918...156,385,134
Ensembl chr 2:156,262,829...156,385,134
JBrowse link
G Epb41l2 erythrocyte membrane protein band 4.1 like 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:25,235,680...25,399,417
Ensembl chr10:25,235,696...25,399,417
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:69,382,642...69,596,986
Ensembl chr17:69,382,678...69,596,984
JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:106,055,792...106,074,650
Ensembl chr 8:106,055,795...106,074,585
JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:24,841,445...25,266,564
Ensembl chr18:24,841,680...25,266,558
JBrowse link
G Fmnl1 formin-like 1 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:103,061,401...103,089,727
Ensembl chr11:103,061,933...103,089,727
JBrowse link
G Fmnl2 formin-like 2 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:52,747,731...53,024,214
Ensembl chr 2:52,747,872...53,023,816
JBrowse link
G Fmnl3 formin-like 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:99,215,091...99,268,375
Ensembl chr15:99,215,106...99,268,363
JBrowse link
G Ikbkb inhibitor of kappaB kinase beta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:23,149,221...23,196,605
Ensembl chr 8:23,149,228...23,196,605
JBrowse link
G Llgl1 LLGL1 scribble cell polarity complex component involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:60,590,501...60,605,012
Ensembl chr11:60,590,549...60,605,012
JBrowse link
G Llgl2 LLGL2 scribble cell polarity complex component involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606
JBrowse link
G Nckap1 NCK-associated protein 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IBA
IMP
ISO
(MGI:6201960|PMID:21873635)
(MGI:5502518|PMID:23424621)
GO_Central
UniProt
MGI
PMID:21873635 PMID:23424621 GO_REF:0000096 MGI:4834177 MGI:5502518 MGI:6201960 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237
JBrowse link
G Plek pleckstrin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:16,921,206...16,958,718
Ensembl chr11:16,921,206...17,002,381
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:90,121,022...90,133,694
Ensembl chr 3:90,121,002...90,133,692
JBrowse link
G Rhoq ras homolog family member Q involved_in ISO
IMP
IBA
(MGI:2178001|PMID:11821390)
(MGI:6201960|PMID:21873635)
MGI
BHF-UCL
GO_Central
PMID:11821390 PMID:21873635 GO_REF:0000096 MGI:2178001 MGI:4834177 MGI:6201960 NCBI chr17:87,270,539...87,307,497
Ensembl chr17:87,270,510...87,307,497
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr18:10,064,401...10,182,225
Ensembl chr18:10,064,401...10,182,045
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr12:16,944,808...17,038,275
Ensembl chr12:16,944,896...17,037,824
JBrowse link
G Strip1 striatin interacting protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:107,519,848...107,539,026
Ensembl chr 3:107,519,848...107,539,010
JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within IMP (MGI:2667760|PMID:12867986) MGI PMID:12867986 MGI:2667760 NCBI chr 4:43,531,513...43,562,583
Ensembl chr 4:43,531,519...43,562,691
JBrowse link
G Tnf tumor necrosis factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
actin cortical patch assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1c coronin, actin binding protein 1C acts_upstream_of_or_within TAS (MGI:1342784|PMID:10461187) MGI PMID:10461187 MGI:1342784 NCBI chr 5:113,980,500...114,046,767
Ensembl chr 5:113,980,497...114,046,819
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin, actin binding protein involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:22,242,510...22,302,132
Ensembl chr 9:22,243,308...22,300,484
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in IMP (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr 9:113,480,812...113,537,457
Ensembl chr 9:113,480,812...113,537,327
JBrowse link
G Racgap1 Rac GTPase-activating protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:99,518,377...99,549,537
Ensembl chr15:99,518,377...99,549,537
JBrowse link
G Rtkn rhotekin involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:83,112,485...83,129,560
Ensembl chr 6:83,112,444...83,129,560
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plec plectin involved_in IMP (MGI:5790023|PMID:26519478) MGI PMID:26519478 MGI:5790023 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:80,361,331...80,453,288
Ensembl chr 7:80,361,331...80,475,722
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:95,763,685...96,028,788
Ensembl chr13:95,763,682...96,028,991
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:87,989,309...88,028,355
Ensembl chr 3:87,989,278...88,028,355
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ect2 ect2 oncogene involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 3:27,151,371...27,208,402
Ensembl chr 3:27,151,371...27,208,027
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in IGI (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr17:7,005,530...7,050,179
Ensembl chr17:7,005,440...7,050,183
JBrowse link
G Pls1 plastin 1 (I-isoform) involved_in
acts_upstream_of_or_within
IGI
IMP
(MGI:5621262|PMID:22114352)
(MGI:5609425|PMID:19321664)
UniProt
MGI
PMID:19321664 PMID:22114352 MGI:5609425 MGI:5621262 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364
JBrowse link
G Vil1 villin 1 involved_in IGI (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr 1:74,448,543...74,474,719
Ensembl chr 1:74,448,535...74,474,718
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28457
    cellular process 17204
      actin filament-based process 837
        actin cytoskeleton organization 749
          cortical actin cytoskeleton organization 42
            actin cortical patch assembly + 1
            actin cortical patch organization + 1
            actomyosin contractile ring organization + 9
            assembly of apicomedial cortex actomyosin 0
            terminal web assembly 3
Path 2
Term Annotations click to browse term
  biological_process 28457
    cellular process 17204
      cellular component organization or biogenesis 6681
        cellular component organization 6480
          organelle organization 3616
            cytoskeleton organization 1517
              actin cytoskeleton organization 749
                cortical actin cytoskeleton organization 42
                  actin cortical patch assembly + 1
                  actin cortical patch organization + 1
                  actomyosin contractile ring organization + 9
                  assembly of apicomedial cortex actomyosin 0
                  terminal web assembly 3
paths to the root