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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical actin cytoskeleton organization
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Accession:GO:0030866 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: actin cortex stabilization;   cortical actin cytoskeleton organisation;   cortical actin cytoskeleton stabilization
 related_synonym: cortical actin cytoskeleton organization and biogenesis;   cortical resistance
 alt_id: GO:0033109


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cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP11 A-kinase anchoring protein 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27402760) Ensembl
MGI
PMID:27402760 GO_REF:0000107 NCBI chr 3:20,447,394...20,498,604
Ensembl chr 3:20,462,176...20,494,670
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:26,948,794...26,952,803
Ensembl chr24:26,949,388...26,950,074
JBrowse link
G CALR calreticulin acts_upstream_of_or_within ISO (PMID:15136153) MGI PMID:15136153 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24069528) Ensembl
MGI
PMID:24069528 GO_REF:0000107 NCBI chr 1:58,504,726...58,507,200
Ensembl chr 1:58,504,782...58,507,438
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chr21:119,235,687...119,240,163 JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:14699157) UniProt PMID:14699157 NCBI chr15:89,937,900...90,214,976
Ensembl chr15:90,055,964...90,215,652
JBrowse link
G EHD2 EH domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15247266) Ensembl
MGI
PMID:15247266 GO_REF:0000107 NCBI chr 6:41,034,263...41,054,340
Ensembl chr 6:41,034,274...41,056,401
JBrowse link
G EPB41 erythrocyte membrane protein band 4.1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:103,704,322...103,928,004
Ensembl chr20:103,699,694...103,927,730
JBrowse link
G EPB41L1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:56,947,777...57,085,856
Ensembl chr 2:56,966,950...57,086,448
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:64,489,194...64,704,733
Ensembl chr18:64,489,042...64,585,973
JBrowse link
G FHOD1 formin homology 2 domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:60,207,972...60,227,032
Ensembl chr 5:60,208,109...60,229,272
JBrowse link
G FHOD3 formin homology 2 domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:44,053,360...44,540,820
Ensembl chr18:44,049,837...44,540,760
JBrowse link
G FMNL1 formin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:61,169,453...61,198,686
Ensembl chr16:61,169,018...61,198,535
JBrowse link
G FMNL2 formin like 2 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chr10:37,757,033...38,081,750 JBrowse link
G FMNL3 formin like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:45,889,840...45,952,938
Ensembl chr11:45,891,979...45,952,917
JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:40,267,532...40,325,282
Ensembl chr 8:40,268,079...40,326,381
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:17,266,648...17,285,460
Ensembl chr16:17,266,684...17,284,076
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:46,103,080...46,151,576
Ensembl chr16:46,102,939...46,135,594
JBrowse link
G NCKAP1 NCK associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:68,434,839...68,546,431
Ensembl chr10:68,433,258...68,545,990
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (MGI:5502518|PMID:23424621)
(PMID:16417406), (PMID:32647003)
UniProt PMID:16417406 PMID:23424621 PMID:32647003 MGI:5502518 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G PLEK pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,689,387...38,769,090
Ensembl chr14:38,689,393...38,745,893
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr20:9,832,220...9,836,890 JBrowse link
G RHOQ ras homolog family member Q involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr14:60,605,881...60,648,444
Ensembl chr14:60,608,998...60,648,193
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:59,384,822...59,538,780
Ensembl chr18:59,384,944...59,540,070
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr14:96,275,889...96,443,048
Ensembl chr14:96,276,023...96,432,790
JBrowse link
G STRIP1 striatin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:23,487,653...23,508,732
Ensembl chr20:23,486,666...23,508,238
JBrowse link
G TLN1 talin 1 acts_upstream_of_or_within ISO (PMID:12867986) MGI PMID:12867986 NCBI chr12:44,870,004...44,906,686
Ensembl chr12:44,876,643...44,907,072
JBrowse link
G TNF tumor necrosis factor involved_in ISO (PMID:25816133) UniProt PMID:25816133
actin cortical patch assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCKIPSD NCK interacting protein with SH3 domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:10,083,042...10,095,654
Ensembl chr22:10,081,218...10,095,566
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin actin binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:22,034,213...22,099,207
Ensembl chr21:22,034,259...22,099,158
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr15:78,265,099...78,339,307
Ensembl chr15:78,265,252...78,339,873
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,218,987...46,260,477
Ensembl chr11:46,220,090...46,254,602
JBrowse link
G RTKN rhotekin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:32,835,660...32,851,799
Ensembl chr14:32,837,546...32,855,912
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,125,471...138,187,209
Ensembl chr 8:138,125,280...138,149,364
JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:9,363,273...9,485,644
Ensembl chr29:9,362,926...9,485,526
JBrowse link
G IQGAP2 IQ motif containing GTPase activating protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:70,672,171...70,979,766
Ensembl chr 4:70,672,553...70,979,763
JBrowse link
G IQGAP3 IQ motif containing GTPase activating protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:7,286,819...7,334,352
Ensembl chr20:7,286,886...7,333,284
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECT2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:16,612,738...16,685,455
Ensembl chr15:16,612,443...16,685,386
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZR ezrin involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr13:86,342,954...86,399,827
Ensembl chr13:86,344,051...86,370,622
JBrowse link
G PLS1 plastin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19321664) Ensembl
MGI
PMID:19321664 GO_REF:0000107 NCBI chr15:47,919,807...48,031,158
Ensembl chr15:47,919,823...48,003,805
JBrowse link
G VIL1 villin 1 involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr10:104,311,048...104,350,846
Ensembl chr10:104,320,074...104,347,289
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16766
    cellular process 15757
      actin filament-based process 814
        actin cytoskeleton organization 727
          cortical actin cytoskeleton organization 42
            actin cortical patch assembly + 1
            actin cortical patch organization + 1
            actomyosin contractile ring organization + 9
            assembly of apicomedial cortex actomyosin 0
            terminal web assembly 3
Path 2
Term Annotations click to browse term
  biological_process 16766
    cellular process 15757
      cellular component organization or biogenesis 6721
        cellular component organization 6478
          organelle organization 3634
            cytoskeleton organization 1517
              actin cytoskeleton organization 727
                cortical actin cytoskeleton organization 42
                  actin cortical patch assembly + 1
                  actin cortical patch organization + 1
                  actomyosin contractile ring organization + 9
                  assembly of apicomedial cortex actomyosin 0
                  terminal web assembly 3
paths to the root