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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical actin cytoskeleton organization
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Accession:GO:0030866 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: actin cortex stabilization;   cortical actin cytoskeleton organisation;   cortical actin cytoskeleton stabilization
 related_synonym: cortical actin cytoskeleton organization and biogenesis;   cortical resistance
 alt_id: GO:0033109



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cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP11 A-kinase anchoring protein 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27402760) Ensembl
MGI
PMID:27402760 GO_REF:0000107 NCBI chr22:8,462,058...8,509,660
Ensembl chr22:8,465,797...8,509,955
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,445,407...26,449,430
Ensembl chr 8:26,445,647...26,525,530
JBrowse link
G CALR calreticulin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15136153) Ensembl
MGI
PMID:15136153 GO_REF:0000107 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245
JBrowse link
G CAVIN3 caveolae associated protein 3 acts_upstream_of_or_within ISO (PMID:24069528) MGI PMID:24069528 NCBI chr21:29,661,235...29,663,393
Ensembl chr21:29,661,980...29,716,313
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G EHD2 EH domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15247266) Ensembl
MGI
PMID:15247266 GO_REF:0000107 NCBI chr 1:108,317,471...108,336,032
Ensembl chr 1:108,318,680...108,345,885
JBrowse link
G EPB41 erythrocyte membrane protein band 4.1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:71,474,916...71,673,052
Ensembl chr 2:71,474,954...71,584,266
JBrowse link
G EPB41L1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:24,906,516...25,050,109
Ensembl chr24:24,925,629...25,046,776
JBrowse link
G EPB41L2 erythrocyte membrane protein band 4.1 like 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:69,120,583...69,274,433
Ensembl chr 1:69,121,139...69,286,381
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:71,734,325...72,001,496
Ensembl chr 7:71,747,333...71,868,751
JBrowse link
G FHOD1 formin homology 2 domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:82,129,846...82,145,605
Ensembl chr 5:82,129,965...82,145,604
JBrowse link
G FHOD3 formin homology 2 domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:53,477,273...53,933,532
Ensembl chr 7:53,478,930...53,934,331
JBrowse link
G FMNL1 formin like 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:18,317,836...18,342,901
Ensembl chr 9:18,317,819...18,343,547
JBrowse link
G FMNL2 formin like 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118
G FMNL3 formin like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:4,963,786...5,017,601
Ensembl chr27:4,963,436...5,017,079
JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,359,551...23,419,114
Ensembl chr16:23,359,813...23,419,075
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:41,314,807...41,332,687
Ensembl chr 5:41,315,152...41,332,896
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:4,975,309...5,008,383
Ensembl chr 9:4,975,660...4,996,775
JBrowse link
G LOC476151 formin-like protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:53,582,159...53,645,901
Ensembl chr19:53,386,346...53,644,600
JBrowse link
G MOCOS molybdenum cofactor sulfurase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:53,950,561...54,002,046
Ensembl chr 7:53,945,436...54,002,252
JBrowse link
G NCKAP1 NCK associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr27:805,274...858,901
Ensembl chr27:805,310...843,439
JBrowse link
G PLEK pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,395,972...67,421,247
Ensembl chr10:67,395,972...67,421,247
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:43,152,903...43,156,720
Ensembl chr 7:43,153,002...43,156,720
JBrowse link
G RHOQ ras homolog family member Q involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:48,766,623...48,807,198
Ensembl chr10:48,768,191...48,804,129
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G STRIP1 striatin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,911,361...41,930,393
Ensembl chr 6:41,912,583...41,930,371
JBrowse link
G TLN1 talin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chr11:52,227,286...52,260,112
Ensembl chr11:52,227,611...52,259,915
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
actin cortical patch assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCKIPSD NCK interacting protein with SH3 domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:40,443,245...40,449,859
Ensembl chr20:40,442,386...40,449,542
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin, actin binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:47,805,113...47,854,749
Ensembl chr14:47,804,845...47,853,633
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr23:4,112,299...4,199,230
Ensembl chr23:4,112,363...4,196,342
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,689,914...4,718,181
Ensembl chr27:4,689,483...4,727,933
JBrowse link
G RTKN rhotekin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:48,684,794...48,700,309
Ensembl chr17:48,685,089...48,699,966
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
mitotic actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CETN3 centrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:18,529,198...18,547,195
Ensembl chr 3:18,529,240...18,547,069
JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:53,683,869...53,791,136
Ensembl chr 3:53,683,791...53,792,186
JBrowse link
G IQGAP2 IQ motif containing GTPase activating protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:29,894,192...30,134,594
Ensembl chr 3:29,894,870...30,174,259
JBrowse link
G IQGAP3 IQ motif containing GTPase activating protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:41,384,539...41,420,529
Ensembl chr 7:41,382,994...41,419,742
JBrowse link
mitotic actomyosin contractile ring contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYH16 myosin heavy chain 16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,257,815...10,321,643 JBrowse link
G SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:39,936,851...40,163,249
Ensembl chr 5:39,940,165...40,137,627
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECT2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr34:36,897,441...36,958,501
Ensembl chr34:36,896,958...36,958,384
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:48,160,206...48,210,036
Ensembl chr 1:48,160,206...48,210,036
JBrowse link
G PLS1 plastin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19321664) Ensembl
MGI
PMID:19321664 GO_REF:0000107 NCBI chr23:38,243,631...38,347,195
Ensembl chr23:38,243,024...38,347,202
JBrowse link
G VIL1 villin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,065,887...25,090,238
Ensembl chr37:25,065,180...25,090,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      actin filament-based process 861
        actin cytoskeleton organization 774
          cortical actin cytoskeleton organization 47
            actin cortical patch assembly + 1
            actin cortical patch organization + 1
            actomyosin contractile ring organization + 12
            assembly of apicomedial cortex actomyosin 0
            terminal web assembly 3
Path 2
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular component organization or biogenesis 6943
        cellular component organization 6704
          organelle organization 3754
            cytoskeleton organization 1598
              actin cytoskeleton organization 774
                cortical actin cytoskeleton organization 47
                  actin cortical patch assembly + 1
                  actin cortical patch organization + 1
                  actomyosin contractile ring organization + 12
                  assembly of apicomedial cortex actomyosin 0
                  terminal web assembly 3
paths to the root