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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical cytoskeleton organization
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Accession:GO:0030865 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: cortical cytoskeleton organisation
 related_synonym: cortical cytoskeleton organization and biogenesis


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cortical cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Septin7 septin 7 acts_upstream_of_or_within ISO (MGI:5306816|PMID:22232702) MGI PMID:22232702 MGI:5306816 NCBI chrNW_004936478:11,419,334...11,528,954 JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (MGI:3784948|PMID:17515402) UniProt PMID:17515402 MGI:3784948 NCBI chrNW_004936477:16,643,142...16,682,450 JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101964793 programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chrNW_004936473:24,010,942...24,086,836 JBrowse link
G Racgap1 Rac GTPase activating protein 1 involved_in ISO (PMID:16129829) UniProt PMID:16129829 NCBI chrNW_004936512:7,665,144...7,696,615 JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101957084 plectin involved_in ISO (MGI:5790023|PMID:26519478) MGI PMID:26519478 MGI:5790023 NCBI chrNW_004936470:8,194,124...8,252,139 JBrowse link
cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap11 A-kinase anchoring protein 11 acts_upstream_of_or_within ISO (MGI:5792167|PMID:27402760) MGI PMID:27402760 MGI:5792167 NCBI chrNW_004936747:1,479,241...1,526,915 JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in ISO (PMID:10036235)
(PMID:10913182)
UniProt PMID:10036235 PMID:10913182 NCBI chrNW_004936583:181,490...185,466 JBrowse link
G Calr calreticulin acts_upstream_of_or_within ISO (MGI:3051936|PMID:15136153) MGI PMID:15136153 MGI:3051936 NCBI chrNW_004936659:1,994,695...1,999,070 JBrowse link
G Cavin3 caveolae associated protein 3 acts_upstream_of_or_within ISO (MGI:5518817|PMID:24069528) MGI PMID:24069528 MGI:5518817 NCBI chrNW_004936842:387,320...388,877 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:14699157) UniProt PMID:14699157 NCBI chrNW_004936833:551,989...843,064 JBrowse link
G Ehd2 EH domain containing 2 acts_upstream_of_or_within ISO (MGI:3056883|PMID:15247266) MGI PMID:15247266 MGI:3056883 NCBI chrNW_004936664:1,316,621...1,331,678 JBrowse link
G Fmnl1 formin like 1 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chrNW_004936541:1,503,378...1,527,404 JBrowse link
G Fmnl2 formin like 2 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chrNW_004936469:25,024,190...25,303,260 JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004936785:358,128...406,751 JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in ISO (PMID:7542763) UniProt PMID:7542763 NCBI chrNW_004936741:1,770,797...1,784,716 JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:5502518|PMID:23424621)
(PMID:16417406), (PMID:32647003)
UniProt PMID:16417406 PMID:23424621 PMID:32647003 MGI:5502518 NCBI chrNW_004936512:11,683,330...11,734,423 JBrowse link
G Plek pleckstrin involved_in ISO (PMID:10497244) BHF-UCL PMID:10497244 NCBI chrNW_004936491:12,762,421...12,818,249 JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chrNW_004936580:3,728,952...3,733,126 JBrowse link
G Rhoq ras homolog family member Q involved_in ISO (PMID:11821390)
(MGI:2178001|PMID:11821390)
BHF-UCL PMID:11821390 MGI:2178001 NCBI chrNW_004936508:5,692,482...5,727,608 JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004936550:730,462...874,601 JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004936532:7,142,580...7,284,722 JBrowse link
G Strip1 striatin interacting protein 1 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chrNW_004936704:1,495,525...1,514,942 JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) MGI PMID:12867986 MGI:2667760 NCBI chrNW_004936524:3,693,679...3,727,055 JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
cortical microtubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:20551903) UniProt PMID:20551903 NCBI chrNW_004936833:551,989...843,064 JBrowse link
G Ezr ezrin involved_in ISO (PMID:20551903) UniProt PMID:20551903 NCBI chrNW_004936489:10,413,374...10,457,771 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5293247|PMID:21844209) CACAO PMID:21844209 MGI:5293247 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chrNW_004936769:1,424,526...1,447,547 JBrowse link
cytoskeletal matrix organization at active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO PMID:19628693
(MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chrNW_004936489:10,413,374...10,457,771 JBrowse link
G Pls1 plastin 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5621262|PMID:22114352)
(MGI:5609425|PMID:19321664)
UniProt
MGI
PMID:19321664 PMID:22114352 MGI:5609425 MGI:5621262 NCBI chrNW_004936540:4,205,871...4,323,121 JBrowse link
G Vil1 villin 1 involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chrNW_004936569:914,511...938,481 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12170
    cellular process 11365
      cellular component organization or biogenesis 4825
        cellular component organization 4742
          organelle organization 2808
            cytoskeleton organization 1104
              cortical cytoskeleton organization 31
                cortical actin cytoskeleton organization + 26
                cortical microtubule organization 4
                cytoskeletal matrix organization at active zone 1
paths to the root