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ONTOLOGY REPORT - ANNOTATIONS


Term:cortical cytoskeleton organization
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Accession:GO:0030865 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: cortical cytoskeleton organisation
 related_synonym: cortical cytoskeleton organization and biogenesis


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cortical cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:64,762,863...64,789,919
Ensembl chr 7:64,763,050...64,810,973
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,771...4,803,687
JBrowse link
G RAC2 Rac family small GTPase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:10,553,986...10,571,082
Ensembl chr 5:10,553,433...10,573,017
JBrowse link
G RAC3 Rac family small GTPase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:981,072...984,222
Ensembl chr12:981,076...984,227
JBrowse link
G RHOA ras homolog family member A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,836...32,003,722
JBrowse link
G RHOBTB1 Rho related BTB domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:64,326,461...64,465,331
Ensembl chr14:64,326,453...64,465,281
JBrowse link
G RHOBTB3 Rho related BTB domain containing 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:102,334,747...102,395,134
Ensembl chr 2:102,334,741...102,495,758
JBrowse link
G RHOC ras homolog family member C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:107,731,713...107,737,705
Ensembl chr 4:107,731,536...107,737,701
JBrowse link
G RHOD ras homolog family member D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,392,546...5,404,214
Ensembl chr 2:5,392,546...5,404,201
JBrowse link
G RHOF ras homolog family member F, filopodia associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:30,886,053...30,908,048
Ensembl chr14:30,889,790...30,908,419
JBrowse link
G RHOG ras homolog family member G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:6,283,558...6,295,376 JBrowse link
G RHOH ras homolog family member H involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:31,321,005...31,372,366
Ensembl chr 8:31,321,113...31,372,364
JBrowse link
G RND1 Rho family GTPase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:14,914,652...14,922,032
Ensembl chr 5:14,914,642...14,937,020
JBrowse link
G RND2 Rho family GTPase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:19,866,597...19,870,205
Ensembl chr12:19,866,603...19,870,211
JBrowse link
G RND3 Rho family GTPase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:1,715,589...1,732,605
Ensembl chr15:1,715,207...1,734,419
JBrowse link
G SEPTIN7 septin 7 acts_upstream_of_or_within ISO (MGI:5306816|PMID:22232702) MGI PMID:22232702 MGI:5306816 NCBI chr18:38,082,626...38,183,354
Ensembl chr18:38,068,303...38,284,645
JBrowse link
G WDR1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:6,413,338...6,452,383
Ensembl chr 8:6,413,347...6,452,346
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin actin binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:37,647,952...37,710,939
Ensembl chr18:37,647,961...37,709,263
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr13:19,597,064...19,664,047
Ensembl chr13:19,597,108...19,698,270
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,894,314...15,943,619
Ensembl chr 5:15,904,707...15,943,614
JBrowse link
G RTKN rhotekin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:68,598,560...68,613,633
Ensembl chr 3:68,598,236...68,613,633
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:696,355...753,859
Ensembl chr 4:685,456...753,859
JBrowse link
cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP11 A-kinase anchoring protein 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5792167|PMID:27402760) Ensembl
MGI
PMID:27402760 GO_REF:0000107 MGI:5792167 NCBI chr11:24,702,157...24,752,410
Ensembl chr11:24,704,881...24,752,244
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,697,582...179,717,299
Ensembl chr 1:179,697,615...179,717,844
JBrowse link
G CALR calreticulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3051936|PMID:15136153) Ensembl
MGI
PMID:15136153 GO_REF:0000107 MGI:3051936 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,225...66,102,340
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5518817|PMID:24069528) Ensembl
MGI
PMID:24069528 GO_REF:0000107 MGI:5518817 NCBI chr 9:3,378,144...3,379,851
Ensembl chr 9:3,378,207...3,379,848
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chr18:6,166,914...6,171,157 JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,843
JBrowse link
G EHD2 EH domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3056883|PMID:15247266) Ensembl
MGI
PMID:15247266 GO_REF:0000107 MGI:3056883 NCBI chr 6:53,423,489...53,442,007
Ensembl chr 6:53,423,563...53,443,224
JBrowse link
G EPB41 erythrocyte membrane protein band 4.1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:85,842,538...86,029,522
Ensembl chr 6:85,842,605...86,029,522
JBrowse link
G EPB41L1 erythrocyte membrane protein band 4.1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,360,388...39,495,064
Ensembl chr17:39,326,627...39,495,061
JBrowse link
G EPB41L2 erythrocyte membrane protein band 4.1 like 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:32,418,210...32,630,643
Ensembl chr 1:32,418,217...32,630,643
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:101,420,376...101,671,177
Ensembl chr 6:101,420,396...101,671,170
JBrowse link
G FHOD3 formin homology 2 domain containing 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:120,036,824...120,585,987
Ensembl chr 6:120,036,838...120,586,849
JBrowse link
G FMNL1 formin like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:18,198,764...18,225,621
Ensembl chr12:18,198,767...18,225,621
JBrowse link
G FMNL2 formin like 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr15:60,054,300...60,384,666
Ensembl chr15:60,053,877...60,384,655
JBrowse link
G FMNL3 formin like 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:15,592,665...15,646,059
Ensembl chr 5:15,592,665...15,646,046
JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,289,607...11,348,557
Ensembl chr17:11,289,690...11,348,553
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:60,487,337...60,500,423
Ensembl chr12:60,487,341...60,500,451
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:5,809,066...5,846,165
Ensembl chr12:5,809,068...5,846,182
JBrowse link
G NCKAP1 NCK associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:88,425,861...88,528,417
Ensembl chr15:88,425,141...88,528,231
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:19,677,613...19,720,550
Ensembl chr 5:19,677,875...19,723,132
JBrowse link
G PLEK pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,877,741...73,910,163
Ensembl chr 3:73,877,743...74,005,519
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 4:95,705,093...95,709,942 JBrowse link
G RHOQ ras homolog family member Q involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:93,970,545...94,012,660
Ensembl chr 3:93,973,622...94,012,580
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G STRIP1 striatin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:110,061,596...110,081,017
Ensembl chr 4:110,061,600...110,080,822
JBrowse link
G TLN1 talin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2667760|PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 MGI:2667760 NCBI chr 1:236,416,041...236,450,978
Ensembl chr 1:236,416,044...236,450,922
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
cortical microtubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,843
JBrowse link
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,403,362...8,452,750
Ensembl chr 1:8,403,453...8,452,750
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,567,337...48,735,838
JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr14:41,125,819...41,169,582
Ensembl chr14:41,125,869...41,169,582
JBrowse link
cytoskeletal matrix organization at active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECT2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:111,248,215...111,310,746
Ensembl chr13:111,248,134...111,314,828
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,403,362...8,452,750
Ensembl chr 1:8,403,453...8,452,750
JBrowse link
G PLS1 plastin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5609425|PMID:19321664) Ensembl
MGI
PMID:19321664 GO_REF:0000107 MGI:5609425 NCBI chr13:83,307,692...83,434,133
Ensembl chr13:83,308,007...83,434,128
JBrowse link
G VIL1 villin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,463,470...120,494,772
Ensembl chr15:120,463,566...120,492,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16579
    cellular process 15862
      cellular component organization or biogenesis 5860
        cellular component organization 5684
          organelle organization 3453
            cytoskeleton organization 1381
              cortical cytoskeleton organization 57
                cortical actin cytoskeleton organization + 37
                cortical microtubule organization 4
                cytoskeletal matrix organization at active zone 1
paths to the root