Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cortical cytoskeleton organization
go back to main search page
Accession:GO:0030865 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: cortical cytoskeleton organisation
 related_synonym: cortical cytoskeleton organization and biogenesis


show annotations for term's descendants           Sort by:
 
cortical cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEPTIN7 septin 7 acts_upstream_of_or_within ISO (MGI:5306816|PMID:22232702) MGI PMID:22232702 MGI:5306816 NCBI chr 7:36,427,252...36,531,668
Ensembl chr 7:36,662,430...36,766,632
JBrowse link
G WDR1 WD repeat domain 1 involved_in ISO (MGI:3784948|PMID:17515402) UniProt PMID:17515402 MGI:3784948 NCBI chr 4:4,487,054...4,516,732
Ensembl chr 4:9,805,164...9,848,032
JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in ISO (PMID:16129829) UniProt PMID:16129829 NCBI chr12:38,729,885...38,766,063
Ensembl chr12:39,625,796...39,672,256
JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEC plectin involved_in ISO (MGI:5790023|PMID:26519478) MGI PMID:26519478 MGI:5790023 NCBI chr 8:140,681,252...140,742,753
Ensembl chr 8:143,674,696...143,712,433
JBrowse link
cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP11 A-kinase anchoring protein 11 acts_upstream_of_or_within ISO (MGI:5792167|PMID:27402760) MGI PMID:27402760 MGI:5792167 NCBI chr13:23,453,478...23,505,317 JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in ISO (PMID:10913182)
(PMID:10036235)
UniProt PMID:10036235 PMID:10913182 NCBI chr14:30,482,191...30,486,741
Ensembl chr14:48,789,329...48,789,856
JBrowse link
G CALR calreticulin acts_upstream_of_or_within ISO (MGI:3051936|PMID:15136153) MGI PMID:15136153 MGI:3051936 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416
JBrowse link
G CAVIN3 caveolae associated protein 3 acts_upstream_of_or_within ISO (MGI:5518817|PMID:24069528) MGI PMID:24069528 MGI:5518817 NCBI chr11:6,451,364...6,453,206
Ensembl chr11:6,133,656...6,135,485
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:15331630 RGD:1598417 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:14699157) UniProt PMID:14699157 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987
JBrowse link
G EHD2 EH domain containing 2 acts_upstream_of_or_within ISO (MGI:3056883|PMID:15247266) MGI PMID:15247266 MGI:3056883 NCBI chr19:44,707,747...44,737,370
Ensembl chr19:53,365,510...53,389,159
JBrowse link
G FMNL1 formin like 1 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chr17:12,080,723...12,106,157
Ensembl chr17:12,253,234...12,269,446
JBrowse link
G FMNL2 formin like 2 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chr2B:39,635,721...39,949,803
Ensembl chr2B:156,874,912...157,188,035
JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chr 8:41,515,613...41,576,229
Ensembl chr 8:38,960,594...39,020,971
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in ISO (PMID:7542763) UniProt PMID:7542763 NCBI chr17:32,770,511...32,789,756
Ensembl chr17:37,966,100...37,985,103
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (MGI:5502518|PMID:23424621)
(PMID:16417406), (PMID:32647003)
UniProt PMID:16417406 PMID:23424621 PMID:32647003 MGI:5502518 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881
JBrowse link
G PLEK pleckstrin involved_in ISO (PMID:10497244) BHF-UCL PMID:10497244 NCBI chr2A:68,414,281...68,446,647
Ensembl chr2A:69,537,983...69,570,393
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 1:129,338,524...129,343,234 JBrowse link
G RHOQ ras homolog family member Q involved_in ISO (PMID:11821390)
(MGI:2178001|PMID:11821390)
BHF-UCL PMID:11821390 MGI:2178001 NCBI chr2A:46,657,884...46,698,604 JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G STRIP1 striatin interacting protein 1 involved_in ISO (PMID:21834987) UniProt PMID:21834987 NCBI chr 1:112,679,005...112,701,495
Ensembl chr 1:127,640,128...127,662,681
JBrowse link
G TLN1 talin 1 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) MGI PMID:12867986 MGI:2667760 NCBI chr 9:35,549,328...35,583,376
Ensembl chr 9:36,351,836...36,379,228
JBrowse link
G TNF tumor necrosis factor involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
cortical microtubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLG1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:20551903) UniProt PMID:20551903 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987
JBrowse link
G EZR ezrin involved_in ISO (PMID:20551903) UniProt PMID:20551903 NCBI chr 6:156,656,146...156,709,986
Ensembl chr 6:161,670,483...161,723,102
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5293247|PMID:21844209) CACAO PMID:21844209 MGI:5293247 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:107,359,005...107,409,359
Ensembl chr12:110,754,238...110,786,182
JBrowse link
cytoskeletal matrix organization at active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO PMID:19628693
(MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZR ezrin involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr 6:156,656,146...156,709,986
Ensembl chr 6:161,670,483...161,723,102
JBrowse link
G PLS1 plastin 1 acts_upstream_of_or_within
involved_in
ISO (MGI:5609425|PMID:19321664)
(MGI:5621262|PMID:22114352)
MGI
UniProt
PMID:19321664 PMID:22114352 MGI:5609425 MGI:5621262 NCBI chr 3:139,629,825...139,747,080
Ensembl chr 3:147,289,205...147,338,600
JBrowse link
G VIL1 villin 1 involved_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chr2B:105,677,371...105,711,293
Ensembl chr2B:224,274,548...224,304,550
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12657
    cellular process 11790
      cellular component organization or biogenesis 4896
        cellular component organization 4811
          organelle organization 2844
            cytoskeleton organization 1115
              cortical cytoskeleton organization 31
                cortical actin cytoskeleton organization + 26
                cortical microtubule organization 4
                cytoskeletal matrix organization at active zone 1
paths to the root