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ONTOLOGY REPORT - ANNOTATIONS

Term:cortical actin cytoskeleton
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Accession:GO:0030864 term browser browse the term
Definition:The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.

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cortical actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729 		JBrowse link
G Actn2 actinin alpha 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:13,917,215...13,989,093
Ensembl chrNW_004624775:13,916,883...13,989,153 		JBrowse link
G Actn3 actinin alpha 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,844,996...19,859,274
Ensembl chrNW_004624767:19,844,884...19,858,950 		JBrowse link
G Actn4 actinin alpha 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886 		JBrowse link
G Akap13 A-kinase anchoring protein 13 located_in ISO (PMID:11546812) UniProt PMID:11546812 NCBI chrNW_004624768:12,767,120...13,099,288
Ensembl chrNW_004624768:12,765,723...13,095,136 		JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 located_in ISO (PMID:15004221) MGI PMID:15004221 NCBI chrNW_004624764:22,517,254...22,542,356
Ensembl chrNW_004624764:22,517,315...22,542,351 		JBrowse link
G Cdh1 cadherin 1 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581 		JBrowse link
G Cdh2 cadherin 2 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470 		JBrowse link
G Cfl1 cofilin 1 located_in ISO (PMID:15004221), (PMID:15548599) MGI PMID:15004221 PMID:15548599 NCBI chrNW_004624767:20,574,884...20,578,413
Ensembl chrNW_004624767:20,574,966...20,579,796 		JBrowse link
G Cldn5 claudin 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:164,113...166,502
Ensembl chrNW_004624747:164,761...165,417 		JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:15800061), (PMID:24760828) UniProt PMID:15800061 PMID:24760828 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Cotl1 coactosin like F-actin binding protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:1,485,301...1,510,193
Ensembl chrNW_004624746:1,485,321...1,510,276 		JBrowse link
G Cttn cortactin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:16,842,341...16,884,449
Ensembl chrNW_004624767:16,847,459...16,880,183 		JBrowse link
G Dbn1 drebrin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133 		JBrowse link
G Dbnl drebrin like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:7,950,552...7,960,592
Ensembl chrNW_004624740:7,950,556...7,960,568 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein located_in ISO (PMID:19158340) UniProt PMID:19158340 NCBI chrNW_004624839:3,495,580...3,899,009
Ensembl chrNW_004624839:3,509,441...3,899,162 		JBrowse link
G Dstn destrin, actin depolymerizing factor located_in ISO (PMID:15548599) MGI PMID:15548599 NCBI chrNW_004624741:18,728,734...18,758,281
Ensembl chrNW_004624741:18,728,705...18,759,094 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 located_in ISO (PMID:19158340) UniProt PMID:19158340 NCBI chrNW_004624819:732,118...735,391
Ensembl chrNW_004624819:732,268...735,313 		JBrowse link
G Flot1 flotillin 1 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759 		JBrowse link
G Flot2 flotillin 2 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102 		JBrowse link
G Gsn gelsolin located_in ISO (PMID:23575248), (PMID:24236012) UniProt PMID:23575248 PMID:24236012 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905 		JBrowse link
G Gys2 glycogen synthase 2 located_in ISO PMID:9003423 UniProt PMID:9003423 RGD:8553883 NCBI chrNW_004624752:17,090,741...17,145,823
Ensembl chrNW_004624752:17,090,563...17,143,493 		JBrowse link
G Hcls1 hematopoietic cell-specific Lyn substrate 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:26,528,163...26,559,108
Ensembl chrNW_004624731:26,528,097...26,560,695 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:17,703,113...17,797,922
Ensembl chrNW_004624768:17,702,728...17,799,022 		JBrowse link
G Lancl2 LanC like glutathione S-transferase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:487,173...514,484
Ensembl chrNW_004624740:485,874...514,638 		JBrowse link
G Lasp1 LIM and SH3 protein 1 located_in ISO PMID:10806114 UniProt PMID:10806114 RGD:8553950 NCBI chrNW_004624795:3,842,244...3,868,208
Ensembl chrNW_004624795:3,842,242...3,868,217 		JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,227,518...3,245,137
Ensembl chrNW_004624849:3,227,758...3,245,118 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:5,329,988...5,376,368
Ensembl chrNW_004624801:5,329,916...5,370,345 		JBrowse link
G Med28 mediator complex subunit 28 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:14,225,597...14,236,814
Ensembl chrNW_004624755:14,227,819...14,236,775 		JBrowse link
G Misp mitotic spindle positioning located_in ISO (PMID:23509069) UniProt PMID:23509069 NCBI chrNW_004624828:7,800,424...7,812,035 JBrowse link
G Mlph melanophilin located_in ISO (PMID:16247022) MGI PMID:16247022 NCBI chrNW_004624847:2,919,391...2,958,459
Ensembl chrNW_004624847:2,919,404...2,958,554 		JBrowse link
G Mobp myelin associated oligodendrocyte basic protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:78,759,681...78,794,632
Ensembl chrNW_004624730:78,762,075...78,773,422 		JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:12,868,006...12,887,616
Ensembl chrNW_004624746:12,867,679...12,887,578 		JBrowse link
G Myadm myeloid associated differentiation marker located_in ISO (PMID:21325632), (PMID:23264465) UniProt PMID:21325632 PMID:23264465 NCBI chrNW_004624832:2,568,128...2,574,248
Ensembl chrNW_004624832:2,568,128...2,573,544 		JBrowse link
G Myo1a myosin IA located_in ISO (PMID:8692943) UniProt PMID:8692943 NCBI chrNW_004624802:10,892,685...10,913,953
Ensembl chrNW_004624802:10,892,774...10,913,952 		JBrowse link
G Myo1f myosin IF located_in ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004624828:1,269,287...1,307,676
Ensembl chrNW_004624828:1,269,610...1,307,443 		JBrowse link
G Myzap myocardial zonula adherens protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:14,084,818...14,163,082
Ensembl chrNW_004624781:14,084,410...14,163,147 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in ISO (PMID:15467741) MGI PMID:15467741 NCBI chrNW_004624747:5,923,827...6,011,276
Ensembl chrNW_004624747:5,923,834...6,011,939 		JBrowse link
G Pdlim2 PDZ and LIM domain 2 located_in ISO RGD PMID:15505042 RGD:1359754 NCBI chrNW_004624758:18,085,818...18,098,621 JBrowse link
G Pjvk pejvakin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624844:424,903...432,841
Ensembl chrNW_004624844:426,636...433,043 		JBrowse link
G Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 located_in ISO (MGI:5487756|PMID:22832517) UniProt PMID:22832517 MGI:5487756 NCBI chrNW_004624738:25,122,843...25,240,304
Ensembl chrNW_004624738:25,123,506...25,239,175 		JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A located_in ISO (PMID:15996550) MGI PMID:15996550 NCBI chrNW_004624813:1,587,567...1,951,620
Ensembl chrNW_004624813:1,588,261...1,945,788 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B located_in ISO (PMID:15996550) MGI PMID:15996550 NCBI chrNW_004624795:6,124,273...6,137,776
Ensembl chrNW_004624795:6,124,159...6,137,955 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 located_in ISO (PMID:21047789) UniProt PMID:21047789 RGD:10054076 NCBI chrNW_004624816:4,496,848...4,519,782
Ensembl chrNW_004624816:4,496,856...4,519,911 		JBrowse link
G Rdx radixin located_in ISO PMID:21047789
(MGI:5645204|PMID:21047789)		 UniProt PMID:21047789 MGI:5645204 RGD:10054076 NCBI chrNW_004624784:5,198,433...5,304,953
Ensembl chrNW_004624784:5,221,045...5,271,045 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha ISO RGD PMID:16356937 RGD:1624121 NCBI chrNW_004624860:3,123,676...3,152,217
Ensembl chrNW_004624860:3,126,379...3,145,043 		JBrowse link
G Shroom2 shroom family member 2 located_in ISO (MGI:3690292|PMID:16684770)
(PMID:16684770)		 UniProt
HGNC-UCL		 PMID:16684770 MGI:3690292 NCBI chrNW_004624834:7,329,651...7,504,960 JBrowse link
G Shroom3 shroom family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:14,187,911...14,524,999
Ensembl chrNW_004624757:14,187,756...14,394,834 		JBrowse link
G Shroom4 shroom family member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 located_in ISO (PMID:18347014) UniProt PMID:18347014 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037 		JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:2,638,605...2,715,934
Ensembl chrNW_004624794:2,639,039...2,714,591 		JBrowse link
G Sptan1 spectrin alpha, non-erythrocytic 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:6,331,554...6,388,953
Ensembl chrNW_004624760:6,331,554...6,386,216 		JBrowse link
G Sptb spectrin beta, erythrocytic located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:36,151,701...36,272,058
Ensembl chrNW_004624734:36,202,011...36,270,942 		JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:6,947,611...7,144,688
Ensembl chrNW_004624833:6,947,273...7,089,924 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 located_in ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
G Utrn utrophin ISO RGD PMID:10760950 RGD:1580541 NCBI chrNW_004624753:9,548,914...10,090,635
Ensembl chrNW_004624753:9,554,240...9,984,058 		JBrowse link
G Wdr1 WD repeat domain 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:21,090,599...21,124,107
Ensembl chrNW_004624755:21,090,717...21,123,259 		JBrowse link
actin cap term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 located_in ISO (PMID:21494665), (PMID:21874009) MGI PMID:21494665 PMID:21874009 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830 		JBrowse link
G Cald1 caldesmon 1 located_in ISO (PMID:2909534) MGI PMID:2909534 NCBI chrNW_004624765:15,262,032...15,452,201
Ensembl chrNW_004624765:15,357,775...15,449,952 		JBrowse link
G Gsn gelsolin located_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905 		JBrowse link
G Wasl WASP like actin nucleation promoting factor located_in ISO (PMID:21874009) MGI PMID:21874009 NCBI chrNW_004624783:12,239,467...12,322,403
Ensembl chrNW_004624783:12,254,715...12,323,232 		JBrowse link
actomyosin contractile ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin actin binding protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:24,756,633...24,831,168
Ensembl chrNW_004624740:24,756,234...24,830,978 		JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase located_in ISO (PMID:16510120) UniProt PMID:16510120 NCBI chrNW_004624755:25,934,569...25,968,726
Ensembl chrNW_004624755:25,934,569...25,968,706 		JBrowse link
G Myh2 myosin heavy chain 2 located_in ISO (PMID:15548599) MGI PMID:15548599 NCBI chrNW_004624786:12,888,622...12,914,886 JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO (PMID:11029059) UniProt PMID:11029059 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669 		JBrowse link
G Pstpip1 proline-serine-threonine phosphatase interacting protein 1 located_in ISO (PMID:9265651) MGI PMID:9265651 NCBI chrNW_004624894:1,369,242...1,400,765
Ensembl chrNW_004624894:1,368,455...1,400,340 		JBrowse link
G Rtkn rhotekin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:29,061,202...29,077,928
Ensembl chrNW_004624749:29,060,934...29,076,451 		JBrowse link
cuticular plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004624744:1,930,085...1,960,950
Ensembl chrNW_004624744:1,929,988...1,963,464 		JBrowse link
G Calb2 calbindin 2 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004624746:13,549,339...13,577,929
Ensembl chrNW_004624746:13,548,540...13,578,501 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO (PMID:26426422) UniProt PMID:26426422 NCBI chrNW_004624894:2,688,784...2,704,742
Ensembl chrNW_004624894:2,688,814...2,704,747 		JBrowse link
G Fchsd1 FCH and double SH3 domains 1 located_in ISO (MGI:6233193|PMID:23437151) UniProt PMID:23437151 MGI:6233193 NCBI chrNW_004624774:867,864...880,929
Ensembl chrNW_004624774:867,895...879,518 		JBrowse link
G Kncn kinocilin located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:2,430,631...2,436,814
Ensembl chrNW_004624906:2,433,840...2,436,732 		JBrowse link
G Myo1e myosin IE ISO RGD PMID:12486594 RGD:1298992 NCBI chrNW_004624781:12,682,614...12,866,990
Ensembl chrNW_004624781:12,682,514...12,871,099 		JBrowse link
G Ocm oncomodulin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004624740:31,461,152...31,581,141
Ensembl chrNW_004624740:31,461,266...31,465,473 		JBrowse link
G Pvalb parvalbumin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004624752:10,969,746...10,985,437
Ensembl chrNW_004624752:10,969,757...10,986,061 		JBrowse link
G Snx9 sorting nexin 9 located_in ISO (MGI:6233193|PMID:23437151) UniProt PMID:23437151 MGI:6233193 NCBI chrNW_004624785:283,886...374,740
Ensembl chrNW_004624785:282,512...374,378 		JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 located_in ISO (PMID:20016102) MGI PMID:20016102 NCBI chrNW_004624794:2,638,605...2,715,934
Ensembl chrNW_004624794:2,639,039...2,714,591 		JBrowse link
G Sptan1 spectrin alpha, non-erythrocytic 1 located_in ISO (PMID:18796539) MGI PMID:18796539 NCBI chrNW_004624760:6,331,554...6,388,953
Ensembl chrNW_004624760:6,331,554...6,386,216 		JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624833:6,947,611...7,144,688
Ensembl chrNW_004624833:6,947,273...7,089,924 		JBrowse link
spectrin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcb protein kinase C beta part_of ISO (MGI:1346761|PMID:10534118) CACAO PMID:10534118 MGI:1346761 NCBI chrNW_004624782:8,974,995...9,287,609
Ensembl chrNW_004624782:8,974,765...9,287,702 		JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 part_of ISO (PMID:6234993) MGI PMID:6234993 NCBI chrNW_004624794:2,638,605...2,715,934
Ensembl chrNW_004624794:2,639,039...2,714,591 		JBrowse link
G Sptb spectrin beta, erythrocytic part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624734:36,151,701...36,272,058
Ensembl chrNW_004624734:36,202,011...36,270,942 		JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624833:6,947,611...7,144,688
Ensembl chrNW_004624833:6,947,273...7,089,924 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108 		JBrowse link
terminal web term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISS AgBase GO_REF:0000024 NCBI chrNW_004624734:32,097,364...32,190,162
Ensembl chrNW_004624734:32,097,671...32,192,729 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein located_in ISO (MGI:5621262|PMID:22114352) UniProt PMID:22114352 MGI:5621262 NCBI chrNW_004624740:3,332,977...3,399,915 JBrowse link
G Hfe homeostatic iron regulator ISO RGD PMID:16208485 RGD:1582698 NCBI chrNW_004624756:821,738...831,482
Ensembl chrNW_004624756:823,947...831,376 		JBrowse link
G Pls1 plastin 1 located_in ISO (PMID:19321664) MGI PMID:19321664 NCBI chrNW_004624730:19,164,360...19,302,369
Ensembl chrNW_004624730:19,163,783...19,302,222 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15756
    cellular anatomical entity 15656
      cytoplasm 9881
        cell cortex 293
          cortical cytoskeleton 114
            cortical actin cytoskeleton 81
              actin cap 4
              actin cortical patch + 0
              actomyosin contractile ring + 6
              cuticular plate 12
              macropinocytic cup cytoskeleton 0
              spectrin 6
              terminal web 4
Path 2
Term Annotations click to browse term
  cellular_component 15756
    cellular anatomical entity 15656
      organelle 11438
        non-membrane-bounded organelle 4234
          intracellular non-membrane-bounded organelle 4234
            cytoskeleton 1983
              actin cytoskeleton 481
                cortical actin cytoskeleton 81
                  actin cap 4
                  actin cortical patch + 0
                  actomyosin contractile ring + 6
                  cuticular plate 12
                  macropinocytic cup cytoskeleton 0
                  spectrin 6
                  terminal web 4
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