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ONTOLOGY REPORT - ANNOTATIONS

Term:cortical actin cytoskeleton
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Accession:GO:0030864 term browser browse the term
Definition:The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.

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cortical actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin alpha 1 located_in ISO RGD PMID:15505042 RGD:1359754 NCBI chrNW_004955466:1,388,507...1,480,990
Ensembl chrNW_004955466:1,388,507...1,480,282 		JBrowse link
G Actn2 actinin alpha 2 located_in ISO RGD PMID:15505042 RGD:1359754 NCBI chrNW_004955492:3,483,704...3,554,831
Ensembl chrNW_004955492:3,483,511...3,555,190 		JBrowse link
G Actn4 actinin alpha 4 located_in ISO (MGI:3692220|PMID:16837921) UniProt PMID:16837921 MGI:3692220 NCBI chrNW_004955468:770,573...841,859
Ensembl chrNW_004955468:770,573...842,209 		JBrowse link
G Akap13 A-kinase anchoring protein 13 located_in ISO (PMID:11546812) UniProt PMID:11546812 NCBI chrNW_004955416:19,006,206...19,327,523
Ensembl chrNW_004955416:19,009,485...19,247,626 		JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 located_in ISO (PMID:15004221) MGI PMID:15004221 NCBI chrNW_004955452:17,503,530...17,528,049
Ensembl chrNW_004955452:17,503,531...17,528,049 		JBrowse link
G Cdh1 cadherin 1 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Cdh2 cadherin 2 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004955402:15,829,895...16,049,874
Ensembl chrNW_004955402:15,831,110...16,049,890 		JBrowse link
G Cfl1 cofilin 1 located_in ISO (PMID:15004221), (PMID:15548599) MGI PMID:15004221 PMID:15548599 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571 		JBrowse link
G Cldn5 claudin 5 located_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955442:18,509,501...18,511,267
Ensembl chrNW_004955442:18,509,676...18,510,332 		JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:15800061), (PMID:24760828) UniProt PMID:15800061 PMID:24760828 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein located_in ISO (PMID:19158340) UniProt PMID:19158340 NCBI chrNW_004955463:3,599,415...3,981,187
Ensembl chrNW_004955463:3,598,985...3,990,849 		JBrowse link
G Dstn destrin, actin depolymerizing factor located_in ISO (PMID:15548599) MGI PMID:15548599 NCBI chrNW_004955415:26,567,457...26,598,978
Ensembl chrNW_004955415:26,569,264...26,600,862 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 located_in ISO (PMID:19158340) UniProt PMID:19158340 NCBI chrNW_004955493:8,661,317...8,663,190 JBrowse link
G Flot1 flotillin 1 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924 		JBrowse link
G Flot2 flotillin 2 located_in ISO (PMID:24046456) UniProt PMID:24046456 NCBI chrNW_004955481:4,276,847...4,298,523
Ensembl chrNW_004955481:4,276,860...4,298,523 		JBrowse link
G Gsn gelsolin located_in ISO (PMID:23575248), (PMID:24236012) UniProt PMID:23575248 PMID:24236012 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Gys2 glycogen synthase 2 located_in ISO PMID:9003423 UniProt PMID:9003423 RGD:8553883 NCBI chrNW_004955413:17,182,342...17,240,180
Ensembl chrNW_004955413:17,178,983...17,240,213 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in ISO (PMID:28089576) MGI PMID:28089576 NCBI chrNW_004955416:14,558,628...14,652,031
Ensembl chrNW_004955416:14,560,292...14,650,036 		JBrowse link
G Lancl2 LanC like glutathione S-transferase 2 located_in ISO (PMID:16979580) UniProt PMID:16979580 NCBI chrNW_004955456:204,434...250,143
Ensembl chrNW_004955456:204,434...229,371 		JBrowse link
G Lasp1 LIM and SH3 protein 1 located_in ISO PMID:10806114 UniProt PMID:10806114 RGD:8553950 NCBI chrNW_004955451:13,910,891...13,932,506
Ensembl chrNW_004955451:13,910,889...13,932,506 		JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 located_in ISO (PMID:7542763) UniProt PMID:7542763 NCBI chrNW_004955478:11,075,399...11,089,818
Ensembl chrNW_004955478:11,075,399...11,089,839 		JBrowse link
G Med28 mediator complex subunit 28 located_in ISO (PMID:15467741) MGI PMID:15467741 NCBI chrNW_004955480:6,554,147...6,560,916
Ensembl chrNW_004955480:6,553,235...6,560,916 		JBrowse link
G Misp mitotic spindle positioning located_in ISO (PMID:23509069) UniProt PMID:23509069 NCBI chrNW_004955495:7,034,664...7,044,886
Ensembl chrNW_004955495:7,032,876...7,038,916 		JBrowse link
G Mlph melanophilin located_in ISO (PMID:16247022) MGI PMID:16247022 NCBI chrNW_004955542:2,769,709...2,807,768
Ensembl chrNW_004955542:2,769,649...2,802,672 		JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 located_in ISO (PMID:18413296) MGI PMID:18413296 NCBI chrNW_004955484:3,429,474...3,445,429
Ensembl chrNW_004955484:3,429,474...3,445,446 		JBrowse link
G Myadm myeloid associated differentiation marker located_in ISO (PMID:21325632), (PMID:23264465) UniProt PMID:21325632 PMID:23264465 NCBI chrNW_004955604:280,977...284,381
Ensembl chrNW_004955604:280,977...284,381 		JBrowse link
G Myo1a myosin IA located_in ISO (PMID:8692943) UniProt PMID:8692943 NCBI chrNW_004955458:4,776,345...4,796,075
Ensembl chrNW_004955458:4,776,345...4,796,075 		JBrowse link
G Myo1f myosin IF located_in ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004955563:880,545...916,630
Ensembl chrNW_004955563:880,545...916,630 		JBrowse link
G Myzap myocardial zonula adherens protein located_in ISO (MGI:4947500|PMID:20093627) UniProt PMID:20093627 MGI:4947500 NCBI chrNW_004955450:16,664,673...16,730,769
Ensembl chrNW_004955450:16,664,315...16,730,770 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in ISO (PMID:15467741) MGI PMID:15467741 NCBI chrNW_004955455:3,862,804...3,950,669
Ensembl chrNW_004955455:3,862,347...3,951,891 		JBrowse link
G Pdlim2 PDZ and LIM domain 2 located_in ISO RGD PMID:15505042 RGD:1359754 NCBI chrNW_004955403:46,006,255...46,019,865 JBrowse link
G Pjvk pejvakin located_in ISO (PMID:28089576) MGI PMID:28089576 NCBI chrNW_004955403:18,386,705...18,393,771
Ensembl chrNW_004955403:18,386,705...18,393,771 		JBrowse link
G Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 located_in ISO (MGI:5487756|PMID:22832517) UniProt PMID:22832517 MGI:5487756 NCBI chrNW_004955441:10,818,982...10,921,224
Ensembl chrNW_004955441:10,825,499...10,919,901 		JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A located_in ISO (PMID:15996550) MGI PMID:15996550 NCBI chrNW_004955432:11,607,269...11,891,568
Ensembl chrNW_004955432:11,608,382...11,886,044 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B located_in ISO (PMID:15996550) MGI PMID:15996550 NCBI chrNW_004955451:11,516,548...11,530,263
Ensembl chrNW_004955451:11,516,548...11,530,830 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 located_in ISO PMID:21047789
(PMID:21047789)		 UniProt PMID:21047789 RGD:10054076 NCBI chrNW_004955500:6,655,056...6,674,311
Ensembl chrNW_004955500:6,655,056...6,674,311 		JBrowse link
G Rdx radixin located_in ISO (MGI:5645204|PMID:21047789) UniProt PMID:21047789 MGI:5645204 RGD:10054076 NCBI chrNW_004955412:12,100,436...12,184,444
Ensembl chrNW_004955412:12,100,359...12,172,545 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha ISO RGD PMID:16356937 RGD:1624121 NCBI chrNW_004955413:4,000,083...4,023,596
Ensembl chrNW_004955413:3,999,613...4,023,596 		JBrowse link
G Shroom2 shroom family member 2 located_in ISO (MGI:3690292|PMID:16684770)
(PMID:16684770)		 UniProt
HGNC-UCL		 PMID:16684770 MGI:3690292 NCBI chrNW_004955499:8,031,961...8,103,307
Ensembl chrNW_004955499:8,031,615...8,100,952 		JBrowse link
G Shroom4 shroom family member 4 located_in ISO (MGI:3690292|PMID:16684770) HGNC-UCL PMID:16684770 MGI:3690292 NCBI chrNW_004955543:1,810,125...2,046,144 JBrowse link
G Slc2a1 solute carrier family 2 member 1 located_in ISO (PMID:18347014) UniProt PMID:18347014 NCBI chrNW_004955537:2,408,042...2,438,788
Ensembl chrNW_004955537:2,408,042...2,439,511 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 located_in ISO PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chrNW_004955455:8,744,865...8,781,644
Ensembl chrNW_004955455:8,744,176...8,783,741 		JBrowse link
G Utrn utrophin ISO RGD PMID:10760950 RGD:1580541 NCBI chrNW_004955436:15,730,416...16,237,379
Ensembl chrNW_004955436:15,730,020...16,231,919 		JBrowse link
actin cap term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 located_in ISO (PMID:21494665), (PMID:21874009) MGI PMID:21494665 PMID:21874009 NCBI chrNW_004955424:19,293,949...19,333,170
Ensembl chrNW_004955424:19,293,949...19,333,170 		JBrowse link
G Cald1 caldesmon 1 located_in ISO (PMID:2909534) MGI PMID:2909534 NCBI chrNW_004955494:7,578,162...7,675,558 JBrowse link
G Gsn gelsolin located_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Wasl WASP like actin nucleation promoting factor located_in ISO (PMID:21874009) MGI PMID:21874009 NCBI chrNW_004955479:5,167,851...5,200,512
Ensembl chrNW_004955479:5,166,393...5,200,512 		JBrowse link
actomyosin contractile ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin actin binding protein located_in ISO (PMID:10931866) MGI PMID:10931866 NCBI chrNW_004955460:6,972,077...7,033,900
Ensembl chrNW_004955460:6,947,508...7,033,669 		JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase located_in ISO (PMID:16510120) UniProt PMID:16510120 NCBI chrNW_004955514:689,867...722,779
Ensembl chrNW_004955514:689,868...722,779 		JBrowse link
G Myh2 myosin heavy chain 2 located_in ISO (PMID:15548599) MGI PMID:15548599 NCBI chrNW_004955467:6,655,346...6,681,354 JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO (PMID:11029059) UniProt PMID:11029059 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450 		JBrowse link
G Pstpip1 proline-serine-threonine phosphatase interacting protein 1 located_in ISO (PMID:9265651) MGI PMID:9265651 NCBI chrNW_004955450:1,876,553...1,908,269
Ensembl chrNW_004955450:1,876,409...1,908,185 		JBrowse link
cuticular plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502 		JBrowse link
G Calb2 calbindin 2 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955484:4,075,103...4,103,509
Ensembl chrNW_004955484:4,075,067...4,103,559 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO (PMID:26426422) UniProt PMID:26426422 NCBI chrNW_004955450:660,655...674,726
Ensembl chrNW_004955450:659,383...675,634 		JBrowse link
G Fchsd1 FCH and double SH3 domains 1 located_in ISO (MGI:6233193|PMID:23437151) UniProt PMID:23437151 MGI:6233193 NCBI chrNW_004955415:12,123,520...12,135,412
Ensembl chrNW_004955415:12,123,520...12,135,412 		JBrowse link
G Kncn kinocilin located_in ISO (PMID:15855039) MGI PMID:15855039 NCBI chrNW_004955464:11,756,803...11,759,934
Ensembl chrNW_004955464:11,756,803...11,759,934 		JBrowse link
G Myo1e myosin IE ISO RGD PMID:12486594 RGD:1298992 NCBI chrNW_004955450:15,421,843...15,551,680
Ensembl chrNW_004955450:15,456,580...15,551,584 		JBrowse link
G Ocm oncomodulin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955460:13,876,279...13,880,643 JBrowse link
G Pvalb parvalbumin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955413:23,329,467...23,345,487
Ensembl chrNW_004955413:23,329,467...23,345,487 		JBrowse link
G Snx9 sorting nexin 9 located_in ISO (MGI:6233193|PMID:23437151) UniProt PMID:23437151 MGI:6233193 NCBI chrNW_004955439:4,422,385...4,503,408
Ensembl chrNW_004955439:4,421,297...4,503,393 		JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 located_in ISO (PMID:20016102) MGI PMID:20016102 NCBI chrNW_004955468:10,472,601...10,545,402
Ensembl chrNW_004955468:10,472,671...10,545,313 		JBrowse link
G Sptan1 spectrin alpha, non-erythrocytic 1 located_in ISO (PMID:18796539) MGI PMID:18796539 NCBI chrNW_004955570:1,016,510...1,076,499
Ensembl chrNW_004955570:1,016,510...1,076,499 		JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 located_in ISO (PMID:18796539) MGI PMID:18796539 NCBI chrNW_004955441:20,248,578...20,378,038
Ensembl chrNW_004955441:20,248,578...20,378,038 		JBrowse link
spectrin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcb protein kinase C beta part_of ISO (MGI:1346761|PMID:10534118) CACAO PMID:10534118 MGI:1346761 NCBI chrNW_004955493:2,395,494...2,710,522
Ensembl chrNW_004955493:2,395,109...2,710,934 		JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 part_of ISO (PMID:6234993) MGI PMID:6234993 NCBI chrNW_004955468:10,472,601...10,545,402
Ensembl chrNW_004955468:10,472,671...10,545,313 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 part_of ISO (PMID:9826670) UniProt PMID:9826670 NCBI chrNW_004955422:18,659,489...18,699,338
Ensembl chrNW_004955422:18,659,489...18,699,338 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 part_of ISO (PMID:11086001) UniProt PMID:11086001 NCBI chrNW_004955578:730,916...813,740
Ensembl chrNW_004955578:731,814...810,065 		JBrowse link
terminal web term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator ISO RGD PMID:16208485 RGD:1582698 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
G Pls1 plastin 1 located_in ISO (PMID:19321664) MGI PMID:19321664 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12720
    cellular anatomical entity 12562
      cytoplasm 8408
        cell cortex 245
          cortical cytoskeleton 100
            cortical actin cytoskeleton 68
              actin cap 4
              actin cortical patch + 0
              actomyosin contractile ring + 5
              cuticular plate 12
              macropinocytic cup cytoskeleton 0
              spectrin 4
              terminal web 2
Path 2
Term Annotations click to browse term
  cellular_component 12720
    cellular anatomical entity 12562
      organelle 9993
        non-membrane-bounded organelle 3694
          intracellular non-membrane-bounded organelle 3694
            cytoskeleton 1701
              actin cytoskeleton 411
                cortical actin cytoskeleton 68
                  actin cap 4
                  actin cortical patch + 0
                  actomyosin contractile ring + 5
                  cuticular plate 12
                  macropinocytic cup cytoskeleton 0
                  spectrin 4
                  terminal web 2
paths to the root