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ONTOLOGY REPORT - ANNOTATIONS

Term:preribosome, small subunit precursor
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Accession:GO:0030688 term browser browse the term
Definition:A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.
Comment:Note that this complex is 43S in Saccharomyces.
Synonyms:narrow_synonym: 43S preribosome


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preribosome, small subunit precursor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bysl bystin-like part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397 		JBrowse link
G Ltv1 LTV1 ribosome biogenesis factor part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563 		JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog part_of IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815 		JBrowse link
G Nop9 NOP9 nucleolar protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220 		JBrowse link
G Riok1 RIO kinase 1 part_of ISO
IBA		 (PMID:22072790)
GO_REF:0000033		 RGD
GO_Central		 PMID:22072790 GO_REF:0000033 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900 		JBrowse link
G Riok2 RIO kinase 2 part_of ISO
IBA		 (PMID:19564402)
GO_REF:0000033		 RGD
GO_Central		 PMID:19564402 GO_REF:0000033 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512 		JBrowse link
G Riok3 RIO kinase 3 part_of ISO
IBA		 (PMID:22072790), (PMID:22418843)
GO_REF:0000033		 RGD
GO_Central		 PMID:22072790 PMID:22418843 GO_REF:0000033 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343 		JBrowse link
G Rrp1 ribosomal RNA processing 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,260,892...10,272,141
Ensembl chr20:10,260,870...10,272,144 		JBrowse link
G Rrp1b ribosomal RNA processing 1B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,123,111...10,148,704
Ensembl chr20:10,123,125...10,147,928 		JBrowse link
G Slx9 SLX9 ribosome biogenesis factor part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:11,114,632...11,147,532
Ensembl chr20:11,114,589...11,147,521 		JBrowse link
G Tsr1 TSR1, ribosome maturation factor part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864 		JBrowse link
Noc4p-Nop14p complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Noc4l nucleolar complex associated 4 homolog part_of IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:46,016,077...46,020,615
Ensembl chr12:46,016,069...46,020,614 		JBrowse link
G Nop14 NOP14 nucleolar protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,081,313...76,102,454
Ensembl chr14:76,080,793...76,102,453 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      ribonucleoprotein complex 1355
        preribosome 130
          preribosome, small subunit precursor 14
            Noc4p-Nop14p complex 2
paths to the root