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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic vesicle membrane
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Accession:GO:0030659 term browser browse the term
Definition:The lipid bilayer surrounding a cytoplasmic vesicle.


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cytoplasmic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHNAK2 AHNAK nucleoprotein 2 JBrowse link 14 85,587,016 85,627,319 RGD:9068941
G APPBP2 amyloid beta precursor protein binding protein 2 JBrowse link 17 54,528,229 54,611,458 RGD:9068941
G AQP5 aquaporin 5 JBrowse link 12 38,789,505 38,793,305 RGD:9068941
G C2CD5 C2 calcium dependent domain containing 5 JBrowse link 12 63,769,552 63,865,681 RGD:9068941
G CFTR CF transmembrane conductance regulator JBrowse link 7 109,449,847 109,633,023 RGD:9068941
G ECE2 endothelin converting enzyme 2 JBrowse link 3 181,310,554 181,327,602 RGD:9068941
G FMN2 formin 2 JBrowse link 1 215,626,889 216,023,590 RGD:9068941
G HTT huntingtin JBrowse link 4 3,215,081 3,388,587 RGD:9068941
G IYD iodotyrosine deiodinase JBrowse link 6 148,178,638 148,216,122 RGD:9068941
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 JBrowse link 11 2,469,750 2,874,467 RGD:9068941
G KIF1B kinesin family member 1B JBrowse link 1 8,969,910 9,141,964 RGD:9068941
G LAMP5 lysosomal associated membrane protein family member 5 JBrowse link 20 9,487,971 9,503,912 RGD:9068941
G LNPEP leucyl and cystinyl aminopeptidase JBrowse link 5 92,247,060 92,348,900 RGD:9068941
G LOC100967334 G-protein coupled estrogen receptor 1 JBrowse link 7 1,245,873 1,251,915 RGD:9068941
G MFSD10 major facilitator superfamily domain containing 10 JBrowse link 4 3,073,071 3,077,765 RGD:9068941
G MREG melanoregulin JBrowse link 2B 103,204,959 103,296,122 RGD:9068941
G MYO1C myosin IC JBrowse link 17 1,446,506 1,475,634 RGD:9068941
G RAB9A RAB9A, member RAS oncogene family JBrowse link X 6,296,483 6,317,826 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G SGSM1 small G protein signaling modulator 1 JBrowse link 22 5,761,495 5,882,410 RGD:9068941
G SH3BP5 SH3 domain binding protein 5 JBrowse link 3 15,180,369 15,257,951 RGD:9068941
G SLC12A2 solute carrier family 12 member 2 JBrowse link 5 123,499,267 123,603,777 RGD:9068941
G SLC2A4 solute carrier family 2 member 4 JBrowse link 17 7,312,605 7,319,430 RGD:9068941
G SNCA synuclein alpha JBrowse link 4 82,018,585 82,132,938 RGD:9068941
G SNX9 sorting nexin 9 JBrowse link 6 155,724,026 155,844,553 RGD:9068941
G SORT1 sortilin 1 JBrowse link 1 111,687,119 111,775,339 RGD:9068941
G SPIRE1 spire type actin nucleation factor 1 JBrowse link 18 1,663,614 1,881,357 RGD:9068941
G SPIRE2 spire type actin nucleation factor 2 JBrowse link 16 70,580,030 70,634,143 RGD:9068941
G TH tyrosine hydroxylase JBrowse link 11 2,204,820 2,212,750 RGD:9068941
G TMEM67 transmembrane protein 67 JBrowse link 8 90,378,623 90,442,904 RGD:9068941
G TOR1A torsin family 1 member A JBrowse link 9 100,940,554 100,951,726 RGD:9068941
G TRARG1 trafficking regulator of GLUT4 (SLC2A4) 1 JBrowse link 17 1,262,220 1,286,565 RGD:9068941
G TRIM72 tripartite motif containing 72 JBrowse link 16 23,734,844 23,753,388 RGD:9068941
G TRPM2 transient receptor potential cation channel subfamily M member 2 JBrowse link 21 30,606,825 30,737,313 RGD:9068941
G ULK1 unc-51 like autophagy activating kinase 1 JBrowse link 12 129,549,399 129,579,087 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
G VAMP5 vesicle associated membrane protein 5 JBrowse link 2A 85,634,555 85,646,120 RGD:9068941
G VOPP1 VOPP1 WW domain binding protein JBrowse link 7 56,061,704 56,163,517 RGD:9068941
G ZNRF2 zinc and ring finger 2 JBrowse link 7 30,922,235 31,006,950 RGD:9068941
acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACRBP acrosin binding protein JBrowse link 12 6,768,971 6,778,613 RGD:9068941
G CAV1 caveolin 1 JBrowse link 7 108,497,125 108,533,090 RGD:9068941
G CAV2 caveolin 2 JBrowse link 7 108,254,074 108,480,716 RGD:9068941
G CCDC136 coiled-coil domain containing 136 JBrowse link 7 120,743,177 120,774,401 RGD:9068941
G EQTN equatorin JBrowse link 9 27,109,424 27,144,789 RGD:9068941
G FLOT2 flotillin 2 JBrowse link 17 27,876,424 27,894,836 RGD:9068941
G HYAL3 hyaluronidase 3 JBrowse link 3 50,221,428 50,228,062 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 1,893,102 2,017,771 RGD:9068941
G IZUMO1 izumo sperm-egg fusion 1 JBrowse link 19 45,740,372 45,747,177 RGD:9068941
G PLA1A phospholipase A1 member A JBrowse link 3 116,720,777 116,752,030 RGD:9068941
G SERPINA5 serpin family A member 5 JBrowse link 14 75,205,446 75,217,114 RGD:9068941
G SPACA1 sperm acrosome associated 1 JBrowse link 6 85,925,861 85,944,492 RGD:9068941
G SPACA3 sperm acrosome associated 3 JBrowse link 17 23,789,295 23,810,711 RGD:9068941
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 7 971,632 1,031,152 RGD:9068941
G TEKT3 tektin 3 JBrowse link 17 36,312,646 36,351,538 RGD:9068941
G TEX101 testis expressed 101 JBrowse link 19 40,356,333 40,359,285 RGD:9068941
G TMEM95 transmembrane protein 95 JBrowse link 17 7,389,244 7,391,773 RGD:9068941
G TRIP11 thyroid hormone receptor interactor 11 JBrowse link 14 72,601,649 72,675,784 RGD:9068941
alveolar lamellar body membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCA3 ATP binding cassette subfamily A member 3 JBrowse link 16 1,132,435 1,196,226 RGD:9068941
G LAMP3 lysosomal associated membrane protein 3 JBrowse link 3 180,152,363 180,193,223 RGD:9068941
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPLX3 complexin 3 JBrowse link 15 53,769,138 53,774,330 RGD:9068941
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 RGD:9068941
G LOC100977490 ras-related protein Rab-26 JBrowse link 16 1,006,847 1,012,263 RGD:9068941
G LOC100994374 uncharacterized LOC100994374 JBrowse link 12 117,670,697 117,672,876 RGD:9068941
G RAB10 RAB10, member RAS oncogene family JBrowse link 2A 26,034,046 26,132,658 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 19 7,676,095 7,690,177 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 9 92,305,656 92,329,419 RGD:9068941
G RAB27B RAB27B, member RAS oncogene family JBrowse link 18 48,099,912 48,274,416 RGD:9068941
G RAB2A RAB2A, member RAS oncogene family JBrowse link 8 56,931,782 57,034,343 RGD:9068941
G RAB3A RAB3A, member RAS oncogene family JBrowse link 19 17,672,661 17,679,541 RGD:9068941
G RAB3B RAB3B, member RAS oncogene family JBrowse link 1 51,170,956 51,242,828 RGD:9068941
G RAB3C RAB3C, member RAS oncogene family JBrowse link 5 55,150,508 55,428,094 RGD:9068941
G RAB4A RAB4A, member RAS oncogene family JBrowse link 1 204,818,445 204,849,775 RGD:9068941
G RAB4B RAB4B, member RAS oncogene family JBrowse link 19 37,821,564 37,840,257 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941
G RAB5B RAB5B, member RAS oncogene family JBrowse link 12 32,916,314 32,939,047 RGD:9068941
G RAB5C RAB5C, member RAS oncogene family JBrowse link 17 15,160,965 15,190,840 RGD:9068941
G RAB7A RAB7A, member RAS oncogene family JBrowse link 3 125,784,604 125,873,051 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
AP-1 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFTPH aftiphilin JBrowse link 2A 64,591,970 64,659,953 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 10 44,630,006 44,632,419 RGD:9068941
AP-2 adaptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP2A1 adaptor related protein complex 2 subunit alpha 1 JBrowse link 19 46,779,196 46,820,055 RGD:9068941
G AP2A2 adaptor related protein complex 2 subunit alpha 2 JBrowse link 11 945,170 1,034,860 RGD:9068941
G AP2B1 adaptor related protein complex 2 subunit beta 1 JBrowse link 17 21,070,132 21,208,610 RGD:9068941
G AP2M1 adaptor related protein complex 2 subunit mu 1 JBrowse link 3 181,210,045 181,219,327 RGD:9068941
G AP2S1 adaptor related protein complex 2 subunit sigma 1 JBrowse link 19 43,827,907 43,840,682 RGD:9068941
G BTBD8 BTB domain containing 8 JBrowse link 1 94,739,780 94,843,172 RGD:9068941
G EPS15 epidermal growth factor receptor pathway substrate 15 JBrowse link 1 50,598,692 50,763,585 RGD:9068941
G PICALM phosphatidylinositol binding clathrin assembly protein JBrowse link 11 81,011,324 81,122,352 RGD:9068941
G SGIP1 SH3GL interacting endocytic adaptor 1 JBrowse link 1 65,782,856 65,999,721 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 10 44,630,006 44,632,419 RGD:9068941
G TBC1D5 TBC1 domain family member 5 JBrowse link 3 17,080,589 17,664,776 RGD:9068941
azurophil granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AZU1 azurocidin 1 JBrowse link 19 300,318 304,730 RGD:9068941
G VAMP1 vesicle associated membrane protein 1 JBrowse link 12 6,592,688 6,601,317 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 145,362,432 145,425,097 RGD:9068941
G VAMP8 vesicle associated membrane protein 8 JBrowse link 2A 85,627,678 85,632,205 RGD:9068941
chromaffin granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA7 annexin A7 JBrowse link 10 69,923,353 69,962,980 RGD:9068941
G SRI sorcin JBrowse link 7 80,199,719 80,214,733 RGD:9068941
clathrin coat of endocytic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EPN2 epsin 2 JBrowse link 17 31,777,430 31,874,469 RGD:9068941
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNM1L dynamin 1 like JBrowse link 12 53,476,553 53,541,421 RGD:9068941
G SYNRG synergin gamma JBrowse link 17 19,467,539 19,560,618 RGD:9068941
clathrin vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NECAP1 NECAP endocytosis associated 1 JBrowse link 12 8,201,908 8,217,043 RGD:9068941
G NECAP2 NECAP endocytosis associated 2 JBrowse link 1 15,578,444 15,597,823 RGD:9068941
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TYRP1 tyrosinase related protein 1 JBrowse link 9 12,502,610 12,550,203 RGD:9068941
clathrin-coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CEMIP cell migration inducing hyaluronidase 1 JBrowse link 15 59,760,481 59,932,698 RGD:9068941
G DAB2 DAB adaptor protein 2 JBrowse link 5 70,951,198 71,004,836 RGD:9068941
G DENND1A DENN domain containing 1A JBrowse link 9 94,511,281 95,053,490 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 1 6,534,115 6,544,275 RGD:9068941
coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TEPSIN TEPSIN adaptor related protein complex 4 accessory protein JBrowse link 17 75,653,942 75,665,335 RGD:9068941
COPI vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G COPA COPI coat complex subunit alpha JBrowse link 1 135,643,677 135,697,584 RGD:9068941
G COPB1 COPI coat complex subunit beta 1 JBrowse link 11 14,560,239 14,602,557 RGD:9068941
G COPB2 COPI coat complex subunit beta 2 JBrowse link 3 136,394,480 136,426,544 RGD:9068941
G COPG2 COPI coat complex subunit gamma 2 JBrowse link 7 122,470,494 122,633,223 RGD:9068941
G COPZ1 COPI coat complex subunit zeta 1 JBrowse link 12 34,392,373 34,419,119 RGD:9068941
G COPZ2 COPI coat complex subunit zeta 2 JBrowse link 17 9,500,173 9,511,811 RGD:9068941
G DIPK2A divergent protein kinase domain 2A JBrowse link 3 140,999,699 141,019,908 RGD:9068941
G SCYL1 SCY1 like pseudokinase 1 JBrowse link 11 60,884,136 60,897,790 RGD:9068941
G TMED3 transmembrane p24 trafficking protein 3 JBrowse link 15 58,280,282 58,355,677 RGD:9068941
COPI-coated vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GOLGA5 golgin A5 JBrowse link 14 73,430,700 73,475,979 RGD:9068941
G KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 JBrowse link 19 45,382,456 45,391,338 RGD:9068941
G KDELR2 KDEL endoplasmic reticulum protein retention receptor 2 JBrowse link 7 6,960,456 6,983,515 RGD:9068941
G KDELR3 KDEL endoplasmic reticulum protein retention receptor 3 JBrowse link 22 19,370,008 19,398,810 RGD:9068941
G TMEM199 transmembrane protein 199 JBrowse link 17 28,412,229 28,416,840 RGD:9068941
COPII vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KLHL12 kelch like family member 12 JBrowse link 1 178,490,467 178,527,919 RGD:9068941
G PDCD6 programmed cell death 6 JBrowse link 5 250,025 291,055 RGD:9068941
G PEF1 penta-EF-hand domain containing 1 JBrowse link 1 30,913,773 30,929,066 RGD:9068941
G SAR1A secretion associated Ras related GTPase 1A JBrowse link 10 66,623,355 66,643,354 RGD:9068941
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 3 10,237,101 10,257,694 RGD:9068941
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 14 19,802,612 19,873,076 RGD:9068941
G SEC24A SEC24 homolog A, COPII coat complex component JBrowse link 5 130,050,625 130,128,212 RGD:9068941
G SEC24B SEC24 homolog B, COPII coat complex component JBrowse link 4 101,937,119 102,043,038 RGD:9068941
G SEC24C SEC24 homolog C, COPII coat complex component JBrowse link 10 70,267,194 70,295,116 RGD:9068941
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 4 110,916,508 111,033,298 RGD:9068941
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 4 41,312,389 41,384,924 RGD:9068941
dense core granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADAM8 ADAM metallopeptidase domain 8 RGD:9068941
G VPS13C vacuolar protein sorting 13 homolog C JBrowse link 15 40,819,512 41,020,644 RGD:9068941
early phagosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 JBrowse link 12 102,755,388 102,818,686 RGD:9068941
G RAB31 RAB31, member RAS oncogene family JBrowse link 18 4,424,677 4,578,263 RGD:9068941
endocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUBN cubilin JBrowse link 10 17,141,464 17,446,867 RGD:9068941
G SCARB2 scavenger receptor class B member 2 JBrowse link 4 47,992,589 48,047,528 RGD:9068941
ER to Golgi transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SEC22B SEC22 homolog B, vesicle trafficking protein JBrowse link 1 82,383,313 82,404,612 RGD:9068941
G SEC23A Sec23 homolog A, COPII coat complex component JBrowse link 14 19,802,612 19,873,076 RGD:9068941
extrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CADPS calcium dependent secretion activator JBrowse link 3 62,321,496 62,797,298 RGD:9068941
G KIF1A kinesin family member 1A JBrowse link 2B 127,969,494 128,078,282 RGD:9068941
G STXBP5 syntaxin binding protein 5 JBrowse link 6 145,006,696 145,192,467 RGD:9068941
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMPH amphiphysin JBrowse link 7 39,015,699 39,262,120 RGD:9068941
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 JBrowse link 2A 71,000,096 71,030,306 RGD:9068941
G BIN1 bridging integrator 1 JBrowse link 2B 33,168,767 33,228,075 RGD:9068941
G CLTC clathrin heavy chain JBrowse link 17 53,685,865 53,761,008 RGD:9068941
G DOC2A double C2 domain alpha RGD:9068941
G RPH3A rabphilin 3A JBrowse link 12 110,393,495 110,504,099 RGD:9068941
G SGTA small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 19 1,778,728 1,808,199 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
G SYN2 synapsin II JBrowse link 3 11,935,680 12,118,981 RGD:9068941
G SYN3 synapsin III JBrowse link 22 13,517,932 14,069,661 RGD:9068941
inner acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CD46 CD46 molecule JBrowse link 1 183,330,423 183,373,916 RGD:9068941
G EQTN equatorin JBrowse link 9 27,109,424 27,144,789 RGD:9068941
G TMEM190 transmembrane protein 190 JBrowse link 19 52,418,799 52,421,727 RGD:9068941
G TRIP11 thyroid hormone receptor interactor 11 JBrowse link 14 72,601,649 72,675,784 RGD:9068941
integral component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SYT4 synaptotagmin 4 JBrowse link 18 36,540,756 36,550,439 RGD:9068941
G SYT5 synaptotagmin 5 JBrowse link 19 52,214,261 52,221,678 RGD:9068941
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 JBrowse link 17 14,793,717 14,857,706 RGD:9068941
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 JBrowse link 6 31,205,541 31,207,930 RGD:9068941
G ATP8A1 ATPase phospholipid transporting 8A1 JBrowse link 4 36,729,820 36,978,825 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 4 161,838,061 161,943,072 RGD:9068941
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 JBrowse link 4 75,762,568 75,913,708 RGD:9068941
G LAMP1 lysosomal associated membrane protein 1 JBrowse link 13 94,442,507 94,464,061 RGD:9068941
G MAL2 mal, T cell differentiation protein 2 JBrowse link 8 115,894,617 115,935,359 RGD:9068941
G OPRD1 opioid receptor delta 1 JBrowse link 1 28,068,053 28,143,053 RGD:9068941
G OPRK1 opioid receptor kappa 1 JBrowse link 8 49,650,844 49,677,494 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 149,158,513 150,390,077 RGD:9068941
G PTPRS protein tyrosine phosphatase receptor type S JBrowse link 19 4,227,038 4,361,958 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G SCAMP5 secretory carrier membrane protein 5 JBrowse link 15 53,935,756 53,961,611 RGD:9068941
G SLC10A4 solute carrier family 10 member 4 JBrowse link 4 73,663,681 73,669,852 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 11 22,350,537 22,392,009 RGD:9068941
G SLC17A7 solute carrier family 17 member 7 JBrowse link 19 46,443,076 46,455,195 RGD:9068941
G SLC17A8 solute carrier family 17 member 8 JBrowse link 12 97,935,177 98,001,240 RGD:9068941
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SLC18A3 solute carrier family 18 member A3 JBrowse link 10 44,630,006 44,632,419 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 2A 27,255,944 27,276,720 RGD:9068941
G SLC32A1 solute carrier family 32 member 1 JBrowse link 20 35,049,115 35,054,347 RGD:9068941
G SLC6A17 solute carrier family 6 member 17 JBrowse link 1 112,801,302 112,852,916 RGD:9068941
G SLC6A7 solute carrier family 6 member 7 JBrowse link 5 145,614,286 145,635,345 RGD:9068941
G SLC6A9 solute carrier family 6 member 9 JBrowse link 1 43,298,326 43,333,345 RGD:9068941
G STX12 syntaxin 12 JBrowse link 1 27,035,807 27,086,825 RGD:9068941
G STX16 syntaxin 16 JBrowse link 20 54,999,514 55,027,787 RGD:9068941
G STX1A syntaxin 1A RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G STX7 syntaxin 7 JBrowse link 6 130,232,041 130,289,326 RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 1 125,247,429 125,262,041 RGD:9068941
G SV2B synaptic vesicle glycoprotein 2B JBrowse link 15 69,793,642 69,989,339 RGD:9068941
G SV2C synaptic vesicle glycoprotein 2C JBrowse link 5 38,969,056 39,222,300 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 22 20,253,936 20,289,470 RGD:9068941
G SYNPR synaptoporin JBrowse link 3 63,186,196 63,523,267 RGD:9068941
G SYP synaptophysin JBrowse link X 41,487,538 41,500,039 RGD:9068941
G SYPL1 synaptophysin like 1 JBrowse link 7 98,074,940 98,097,052 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 12 76,392,955 76,981,800 RGD:9068941
G SYT11 synaptotagmin 11 JBrowse link 1 131,193,999 131,218,752 RGD:9068941
G SYT2 synaptotagmin 2 JBrowse link 1 178,187,872 178,308,522 RGD:9068941
G SYT9 synaptotagmin 9 JBrowse link 11 7,350,612 7,565,272 RGD:9068941
G TMEM163 transmembrane protein 163 JBrowse link 2B 25,138,333 25,393,295 RGD:9068941
G VAMP1 vesicle associated membrane protein 1 JBrowse link 12 6,592,688 6,601,317 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 1 6,534,115 6,544,275 RGD:9068941
G VAMP4 vesicle associated membrane protein 4 JBrowse link 1 147,192,001 147,233,945 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 145,362,432 145,425,097 RGD:9068941
G WFS1 wolframin ER transmembrane glycoprotein RGD:9068941
intrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SYT4 synaptotagmin 4 JBrowse link 18 36,540,756 36,550,439 RGD:9068941
melanosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GPR143 G protein-coupled receptor 143 JBrowse link X 2,357,835 2,398,389 RGD:9068941
G MREG melanoregulin JBrowse link 2B 103,204,959 103,296,122 RGD:9068941
G OCA2 OCA2 melanosomal transmembrane protein JBrowse link 15 1,811,728 2,192,018 RGD:9068941
G RAB32 RAB32, member RAS oncogene family JBrowse link 6 144,339,323 144,354,885 RGD:9068941
G RAB38 RAB38, member RAS oncogene family JBrowse link 11 83,121,858 83,183,698 RGD:9068941
G TH tyrosine hydroxylase JBrowse link 11 2,204,820 2,212,750 RGD:9068941
G TYRP1 tyrosinase related protein 1 JBrowse link 9 12,502,610 12,550,203 RGD:9068941
outer acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C4BPA complement component 4 binding protein alpha JBrowse link 1 182,707,221 182,747,878 RGD:9068941
G EQTN equatorin JBrowse link 9 27,109,424 27,144,789 RGD:9068941
G FAM170B family with sequence similarity 170 member B JBrowse link 10 45,110,158 45,113,019 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 1,893,102 2,017,771 RGD:9068941
G TRIP11 thyroid hormone receptor interactor 11 JBrowse link 14 72,601,649 72,675,784 RGD:9068941
phagocytic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA3 annexin A3 JBrowse link 4 45,585,873 45,644,783 RGD:9068941
G DMBT1 deleted in malignant brain tumors 1 JBrowse link 10 119,129,440 119,200,232 RGD:9068941
G LAMP2 lysosomal associated membrane protein 2 JBrowse link X 109,700,185 109,743,579 RGD:9068941
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 2B 95,505,376 95,597,792 RGD:9068941
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 JBrowse link 14 1,332,403 1,336,157 RGD:9068941
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 JBrowse link 8 87,657,202 87,704,355 RGD:9068941
G RAPGEF1 Rap guanine nucleotide exchange factor 1 JBrowse link 9 102,698,970 102,861,482 RGD:9068941
G SLC11A1 solute carrier family 11 member 1 JBrowse link 2B 105,640,613 105,655,524 RGD:9068941
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 JBrowse link 11 63,120,913 63,132,831 RGD:9068941
phagolysosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HRG histidine rich glycoprotein JBrowse link 3 183,701,069 183,712,365 RGD:9068941
G LAMP1 lysosomal associated membrane protein 1 JBrowse link 13 94,442,507 94,464,061 RGD:9068941
platelet alpha granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SELP selectin P JBrowse link 1 145,071,094 145,112,851 RGD:9068941
G SNCA synuclein alpha JBrowse link 4 82,018,585 82,132,938 RGD:9068941
G SPARC secreted protein acidic and cysteine rich JBrowse link 5 147,087,903 147,112,466 RGD:9068941
platelet dense granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC4 ATP binding cassette subfamily C member 4 JBrowse link 13 76,193,929 76,476,119 RGD:9068941
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 JBrowse link 3 4,448,574 4,802,545 RGD:9068941
G LAMP2 lysosomal associated membrane protein 2 JBrowse link X 109,700,185 109,743,579 RGD:9068941
secretory granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CA4 carbonic anhydrase 4 JBrowse link 17 54,236,114 54,258,638 RGD:9068941
G CD177 CD177 molecule JBrowse link 19 40,287,083 40,295,914 RGD:9068941
G CD38 CD38 molecule JBrowse link 4 10,228,803 10,295,129 RGD:9068941
G CPE carboxypeptidase E JBrowse link 4 157,575,157 157,705,173 RGD:9068941
G DBH dopamine beta-hydroxylase JBrowse link 9 104,761,504 104,784,445 RGD:9068941
G ICA1 islet cell autoantigen 1 JBrowse link 7 8,838,319 8,992,433 RGD:9068941
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 JBrowse link 3 4,448,574 4,802,545 RGD:9068941
G LOC100977490 ras-related protein Rab-26 JBrowse link 16 1,006,847 1,012,263 RGD:9068941
G MSN moesin JBrowse link X 54,785,309 54,859,364 RGD:9068941
G MYRIP myosin VIIA and Rab interacting protein JBrowse link 3 39,715,890 40,163,826 RGD:9068941
G PAM peptidylglycine alpha-amidating monooxygenase JBrowse link 5 98,104,058 98,385,157 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 149,158,513 150,390,077 RGD:9068941
G RAB27A RAB27A, member RAS oncogene family JBrowse link 15 34,174,491 34,263,045 RGD:9068941
G RAB27B RAB27B, member RAS oncogene family JBrowse link 18 48,099,912 48,274,416 RGD:9068941
G RPH3AL rabphilin 3A like (without C2 domains) JBrowse link 17 90,816 293,651 RGD:9068941
G SCG3 secretogranin III JBrowse link 15 30,619,990 30,658,668 RGD:9068941
G SYCN syncollin JBrowse link 19 36,301,867 36,303,720 RGD:9068941
G SYT4 synaptotagmin 4 JBrowse link 18 36,540,756 36,550,439 RGD:9068941
G SYT9 synaptotagmin 9 JBrowse link 11 7,350,612 7,565,272 RGD:9068941
G SYTL4 synaptotagmin like 4 JBrowse link X 89,885,478 89,941,381 RGD:9068941
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 JBrowse link 11 63,120,913 63,132,831 RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 55,683,121 55,728,365 RGD:9068941
G TMEM184A transmembrane protein 184A JBrowse link 7 1,793,830 1,803,709 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
G VAMP7 vesicle associated membrane protein 7 JBrowse link X 145,362,432 145,425,097 RGD:9068941
G VAMP8 vesicle associated membrane protein 8 JBrowse link 2A 85,627,678 85,632,205 RGD:9068941
G VGF VGF nerve growth factor inducible JBrowse link 7 93,302,956 93,307,892 RGD:9068941
specific granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G VAMP1 vesicle associated membrane protein 1 JBrowse link 12 6,592,688 6,601,317 RGD:9068941
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC8 ATP binding cassette subfamily C member 8 JBrowse link 11 17,447,564 17,531,513 RGD:9068941
G BCL2L1 BCL2 like 1 JBrowse link 20 27,955,688 28,015,950 RGD:9068941
G C16H16orf70 chromosome 16 C16orf70 homolog JBrowse link 16 47,455,363 47,494,241 RGD:9068941
G CALM1 calmodulin 1 JBrowse link 14 71,015,099 71,026,322 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 2A 47,274,722 47,290,861 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 19 43,593,069 43,602,550 RGD:9068941
G CLTA clathrin light chain A JBrowse link 9 36,040,566 36,061,744 RGD:9068941
G CLTB clathrin light chain B JBrowse link 5 171,689,273 171,713,198 RGD:9068941
G DLG2 discs large MAGUK scaffold protein 2 JBrowse link 11 78,517,601 80,684,319 RGD:9068941
G DMD dystrophin JBrowse link X 23,728,650 26,338,849 RGD:9068941
G DNM1L dynamin 1 like JBrowse link 12 53,476,553 53,541,421 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 11 108,289,838 108,357,174 RGD:9068941
G DTNBP1 dystrobrevin binding protein 1 JBrowse link 6 15,377,263 15,523,317 RGD:9068941
G GAD2 glutamate decarboxylase 2 JBrowse link 10 26,392,877 26,481,859 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 148,879,996 149,206,914 RGD:9068941
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 4 149,566,563 149,712,135 RGD:9068941
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 9 108,198,350 108,228,887 RGD:9068941
G ICA1 islet cell autoantigen 1 JBrowse link 7 8,838,319 8,992,433 RGD:9068941
G MCTP1 multiple C2 and transmembrane domain containing 1 JBrowse link 5 20,071,072 20,669,826 RGD:9068941
G MFF mitochondrial fission factor JBrowse link 2B 114,569,893 114,602,158 RGD:9068941
G OTOF otoferlin JBrowse link 2A 26,454,010 26,555,642 RGD:9068941
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 10 94,261,096 94,293,358 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G PRRT1 proline rich transmembrane protein 1 JBrowse link 6 31,795,267 31,798,873 RGD:9068941
G PTPRN2 protein tyrosine phosphatase receptor type N2 JBrowse link 7 149,158,513 150,390,077 RGD:9068941
G RPH3A rabphilin 3A JBrowse link 12 110,393,495 110,504,099 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G SEMA4C semaphorin 4C JBrowse link 2A 102,443,333 102,455,176 RGD:9068941
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 9 17,386,298 17,605,722 RGD:9068941
G SLC17A7 solute carrier family 17 member 7 JBrowse link 19 46,443,076 46,455,195 RGD:9068941
G SLC17A8 solute carrier family 17 member 8 JBrowse link 12 97,935,177 98,001,240 RGD:9068941
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SLC30A3 solute carrier family 30 member 3 JBrowse link 2A 27,255,944 27,276,720 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 4 95,474,854 95,532,311 RGD:9068941
G SNAP47 synaptosome associated protein 47 JBrowse link 1 203,128,827 203,181,521 RGD:9068941
G SNCA synuclein alpha JBrowse link 4 82,018,585 82,132,938 RGD:9068941
G STX1A syntaxin 1A RGD:9068941
G SV2A synaptic vesicle glycoprotein 2A JBrowse link 1 125,247,429 125,262,041 RGD:9068941
G SYN1 synapsin I JBrowse link X 40,007,777 40,055,801 RGD:9068941
G SYN2 synapsin II JBrowse link 3 11,935,680 12,118,981 RGD:9068941
G SYN3 synapsin III JBrowse link 22 13,517,932 14,069,661 RGD:9068941
G SYNDIG1 synapse differentiation inducing 1 JBrowse link 20 24,402,471 24,629,365 RGD:9068941
G SYNGR1 synaptogyrin 1 JBrowse link 22 20,253,936 20,289,470 RGD:9068941
G SYNGR2 synaptogyrin 2 JBrowse link 17 72,245,844 72,250,031 RGD:9068941
G SYP synaptophysin JBrowse link X 41,487,538 41,500,039 RGD:9068941
G SYT1 synaptotagmin 1 JBrowse link 12 76,392,955 76,981,800 RGD:9068941
G TRPM7 transient receptor potential cation channel subfamily M member 7 JBrowse link 15 29,513,220 29,639,506 RGD:9068941
G UNC13C unc-13 homolog C JBrowse link 15 32,914,784 33,563,610 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
tertiary granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CD177 CD177 molecule JBrowse link 19 40,287,083 40,295,914 RGD:9068941
G SLC11A1 solute carrier family 11 member 1 JBrowse link 2B 105,640,613 105,655,524 RGD:9068941
G VAMP1 vesicle associated membrane protein 1 JBrowse link 12 6,592,688 6,601,317 RGD:9068941
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRGN neurogranin JBrowse link 11 119,566,934 119,574,248 RGD:9068941
G RASSF9 Ras association domain family member 9 JBrowse link 12 83,331,750 83,367,348 RGD:9068941
transport vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CA4 carbonic anhydrase 4 JBrowse link 17 54,236,114 54,258,638 RGD:9068941
vesicle coat term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SEC31A SEC31 homolog A, COPII coat complex component JBrowse link 4 41,312,389 41,384,924 RGD:9068941
G SEC31B SEC31 homolog B, COPII coat complex component JBrowse link 10 97,086,792 97,120,604 RGD:9068941
zymogen granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CLCA1 chloride channel accessory 1 JBrowse link 1 118,999,099 119,030,839 RGD:9068941
G CUZD1 CUB and zona pellucida like domains 1 JBrowse link 10 119,395,492 119,409,696 RGD:9068941
G DMBT1 deleted in malignant brain tumors 1 JBrowse link 10 119,129,440 119,200,232 RGD:9068941
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 JBrowse link 11 2,469,750 2,874,467 RGD:9068941
G LOC100993654 pancreatic lipase-related protein 2 JBrowse link 10 113,203,170 113,216,890 RGD:9068941
G RAB27B RAB27B, member RAS oncogene family JBrowse link 18 48,099,912 48,274,416 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941
G SCAMP1 secretory carrier membrane protein 1 JBrowse link 5 36,829,770 36,951,827 RGD:9068941
G STX3 syntaxin 3 JBrowse link 11 54,976,575 55,027,638 RGD:9068941
G STXBP2 syntaxin binding protein 2 JBrowse link 19 6,926,833 6,937,385 RGD:9068941
G TMED10 transmembrane p24 trafficking protein 10 JBrowse link 14 55,683,121 55,728,365 RGD:9068941
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 12 121,169,915 121,183,524 RGD:9068941
G VAMP2 vesicle associated membrane protein 2 JBrowse link 17 43,495,464 43,499,348 RGD:9068941
G ZG16 zymogen granule protein 16 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12608
    intracellular 10572
      cytoplasm 8101
        cytoplasmic vesicle 1442
          cytoplasmic vesicle membrane 273
            Cvt vesicle membrane 0
            STING complex 0
            aleurone grain membrane 0
            chitosome membrane 0
            coated vesicle membrane + 52
            endocytic vesicle membrane + 28
            esterosome membrane 0
            melanosome membrane 7
            merozoite dense granule membrane 0
            organellar chromatophore membrane + 0
            phagolysosome vesicle membrane 0
            rod photoreceptor disc membrane 0
            secretory granule membrane + 79
            transport vesicle membrane + 125
Path 2
Term Annotations click to browse term
  cellular_component 12608
    cellular anatomical entity 12425
      organelle 9687
        membrane-bounded organelle 8601
          vesicle 1579
            intracellular vesicle 1447
              cytoplasmic vesicle 1442
                cytoplasmic vesicle membrane 273
                  Cvt vesicle membrane 0
                  STING complex 0
                  aleurone grain membrane 0
                  chitosome membrane 0
                  coated vesicle membrane + 52
                  endocytic vesicle membrane + 28
                  esterosome membrane 0
                  melanosome membrane 7
                  merozoite dense granule membrane 0
                  organellar chromatophore membrane + 0
                  phagolysosome vesicle membrane 0
                  rod photoreceptor disc membrane 0
                  secretory granule membrane + 79
                  transport vesicle membrane + 125
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.