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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of vitamin metabolic process
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Accession:GO:0030656 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.
Synonyms:exact_synonym: regulation of vitamin metabolism

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regulation of vitamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd320 CD320 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5506682|PMID:23430977) MGI
Ensembl		 PMID:23430977 GO_REF:0000107 MGI:5506682 NCBI chrNW_004936588:5,142,561...5,147,111
Ensembl chrNW_004936588:5,142,561...5,147,074 		JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:6,610,565...6,618,509
Ensembl chrNW_004936537:6,610,565...6,618,450 		JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:1,336,546...1,464,959
Ensembl chrNW_004936654:1,336,429...1,461,476 		JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642 		JBrowse link
positive regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clybl citramalyl-CoA lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:10,666,345...10,919,694
Ensembl chrNW_004936472:10,686,927...10,919,702 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clybl citramalyl-CoA lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:10,666,345...10,919,694
Ensembl chrNW_004936472:10,686,927...10,919,702 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Isx intestine specific homeobox acts_upstream_of_or_within ISO (MGI:3775349|PMID:18093975) MGI PMID:18093975 MGI:3775349 NCBI chrNW_004936492:5,245,211...5,265,419
Ensembl chrNW_004936492:5,245,211...5,265,419 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15022
    metabolic process 9415
      small molecule metabolic process 1523
        vitamin metabolic process 83
          regulation of vitamin metabolic process 14
            negative regulation of vitamin metabolic process + 6
            positive regulation of vitamin metabolic process + 5
            regulation of L-ascorbic acid biosynthetic process + 0
            regulation of cobalamin metabolic process + 1
            regulation of retinoic acid biosynthetic process + 3
            regulation of thiamine biosynthetic process + 0
            regulation of thiamine diphosphate biosynthetic process + 0
            regulation of vitamin A metabolic process 2
            regulation of vitamin D biosynthetic process + 7
            regulation of vitamin E biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 15022
    biological regulation 10540
      regulation of biological process 10223
        regulation of metabolic process 5576
          regulation of small molecule metabolic process 350
            regulation of vitamin metabolic process 14
              negative regulation of vitamin metabolic process + 6
              positive regulation of vitamin metabolic process + 5
              regulation of L-ascorbic acid biosynthetic process + 0
              regulation of cobalamin metabolic process + 1
              regulation of retinoic acid biosynthetic process + 3
              regulation of thiamine biosynthetic process + 0
              regulation of thiamine diphosphate biosynthetic process + 0
              regulation of vitamin A metabolic process 2
              regulation of vitamin D biosynthetic process + 7
              regulation of vitamin E biosynthetic process + 0
paths to the root