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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of vitamin metabolic process
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Accession:GO:0030656 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.
Synonyms:exact_synonym: regulation of vitamin metabolism


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regulation of vitamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD320 CD320 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5506682|PMID:23430977) MGI
Ensembl		 PMID:23430977 GO_REF:0000107 MGI:5506682 NCBI chr19:8,302,127...8,308,358
Ensembl chr19:8,302,127...8,308,358 		JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IDA (PMID:16549446) BHF-UCL PMID:16549446 NCBI chr12:57,762,334...57,767,078
Ensembl chr12:57,762,334...57,768,986 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IDA (PMID:15947108) BHF-UCL PMID:15947108 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IDA (PMID:15243130) BHF-UCL PMID:15243130 NCBI chr 4:102,501,359...102,617,302
Ensembl chr 4:102,501,330...102,617,302 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1 member C3 involved_in IDA (PMID:21851338) UniProt PMID:21851338 NCBI chr10:5,048,781...5,107,686
Ensembl chr10:5,035,354...5,107,686 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 involved_in IMP (PMID:33495566) UniProt PMID:33495566 NCBI chr11:20,387,716...20,509,338
Ensembl chr11:20,387,558...20,509,338 		JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFI1 growth factor independent 1 transcriptional repressor involved_in IC (PMID:15947108) BHF-UCL PMID:15947108 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IC (PMID:15243130) BHF-UCL PMID:15243130 NCBI chr 4:102,501,359...102,617,302
Ensembl chr 4:102,501,330...102,617,302 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IDA (PMID:19502595) BHF-UCL PMID:19502595 NCBI chr20:49,982,980...49,988,886
Ensembl chr20:49,982,980...49,988,886 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IDA (PMID:18485278), (PMID:19502595) BHF-UCL PMID:18485278 PMID:19502595 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740 		JBrowse link
positive regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLYBL citramalyl-CoA lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:99,606,690...99,909,444
Ensembl chr13:99,606,669...99,909,459 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH10 retinol dehydrogenase 10 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chr12:56,951,431...56,957,608
Ensembl chr12:56,951,431...56,959,374 		JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFNG interferon gamma involved_in IDA (PMID:9282826) BHF-UCL PMID:9282826 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740 		JBrowse link
G TNF tumor necrosis factor involved_in IDA (PMID:1690216) BHF-UCL PMID:1690216 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLYBL citramalyl-CoA lyase involved_in IEA
IBA
IDA		 (PMID:21873635)
(PMID:29056341)		 Ensembl
GO_Central
UniProt		 PMID:21873635 PMID:29056341 GO_REF:0000107 NCBI chr13:99,606,690...99,909,444
Ensembl chr13:99,606,669...99,909,459 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chr 8:144,314,584...144,326,852
Ensembl chr 8:144,314,584...144,326,910 		JBrowse link
G ISX intestine specific homeobox acts_upstream_of_or_within ISO (MGI:3775349|PMID:18093975) MGI PMID:18093975 MGI:3775349 NCBI chr22:35,066,158...35,087,387
Ensembl chr22:35,066,136...35,087,387 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19600
    metabolic process 12946
      small molecule metabolic process 2032
        vitamin metabolic process 124
          regulation of vitamin metabolic process 15
            negative regulation of vitamin metabolic process + 7
            positive regulation of vitamin metabolic process + 5
            regulation of L-ascorbic acid biosynthetic process + 0
            regulation of cobalamin metabolic process + 1
            regulation of retinoic acid biosynthetic process + 4
            regulation of thiamine biosynthetic process + 0
            regulation of thiamine diphosphate biosynthetic process + 0
            regulation of vitamin A metabolic process 2
            regulation of vitamin D biosynthetic process + 7
            regulation of vitamin E biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19600
    biological regulation 13462
      regulation of biological process 13051
        regulation of metabolic process 7795
          regulation of small molecule metabolic process 416
            regulation of vitamin metabolic process 15
              negative regulation of vitamin metabolic process + 7
              positive regulation of vitamin metabolic process + 5
              regulation of L-ascorbic acid biosynthetic process + 0
              regulation of cobalamin metabolic process + 1
              regulation of retinoic acid biosynthetic process + 4
              regulation of thiamine biosynthetic process + 0
              regulation of thiamine diphosphate biosynthetic process + 0
              regulation of vitamin A metabolic process 2
              regulation of vitamin D biosynthetic process + 7
              regulation of vitamin E biosynthetic process + 0
paths to the root