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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of vitamin metabolic process
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Accession:GO:0030656 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.
Synonyms:exact_synonym: regulation of vitamin metabolism


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regulation of vitamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD320 CD320 molecule acts_upstream_of_or_within ISO (MGI:5506682|PMID:23430977) MGI PMID:23430977 MGI:5506682 NCBI chr19:7,587,760...7,594,055
Ensembl chr19:8,438,955...8,445,464 		JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,158,814...31,164,462
Ensembl chr12:31,419,773...31,424,822 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100986388 aldo-keto reductase family 1 member C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,079,580...5,157,572
Ensembl chr10:5,081,214...5,139,812 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,412,419...20,538,295
Ensembl chr11:20,324,196...20,449,681 		JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNAI1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,321,075...46,328,865
Ensembl chr20:47,384,818...47,390,733 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904 		JBrowse link
positive regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLYBL citramalyl-CoA lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:80,774,572...81,066,375
Ensembl chr13:99,912,773...100,195,417 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chr12:31,958,385...31,966,319
Ensembl chr12:32,212,746...32,219,624 		JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829 		JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
regulation of cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLYBL citramalyl-CoA lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:80,774,572...81,066,375
Ensembl chr13:99,912,773...100,195,417 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chr 8:141,079,948...141,090,619
Ensembl chr 8:144,064,587...144,080,155 		JBrowse link
G ISX intestine specific homeobox acts_upstream_of_or_within ISO (MGI:3775349|PMID:18093975) MGI PMID:18093975 MGI:3775349 NCBI chr22:16,071,117...16,095,029
Ensembl chr22:33,917,642...33,938,908 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15441
    metabolic process 10054
      small molecule metabolic process 1596
        vitamin metabolic process 87
          regulation of vitamin metabolic process 15
            negative regulation of vitamin metabolic process + 7
            positive regulation of vitamin metabolic process + 5
            regulation of L-ascorbic acid biosynthetic process + 0
            regulation of cobalamin metabolic process + 1
            regulation of retinoic acid biosynthetic process + 4
            regulation of thiamine biosynthetic process + 0
            regulation of thiamine diphosphate biosynthetic process + 0
            regulation of vitamin A metabolic process 2
            regulation of vitamin D biosynthetic process + 7
            regulation of vitamin E biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 15441
    biological regulation 10819
      regulation of biological process 10471
        regulation of metabolic process 6088
          regulation of small molecule metabolic process 362
            regulation of vitamin metabolic process 15
              negative regulation of vitamin metabolic process + 7
              positive regulation of vitamin metabolic process + 5
              regulation of L-ascorbic acid biosynthetic process + 0
              regulation of cobalamin metabolic process + 1
              regulation of retinoic acid biosynthetic process + 4
              regulation of thiamine biosynthetic process + 0
              regulation of thiamine diphosphate biosynthetic process + 0
              regulation of vitamin A metabolic process 2
              regulation of vitamin D biosynthetic process + 7
              regulation of vitamin E biosynthetic process + 0
paths to the root