Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cellular pH
go back to main search page
Accession:GO:0030641 term browser browse the term
Definition:Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.
Synonyms:exact_synonym: cellular hydrogen ion homeostasis;   proton homeostasis


show annotations for term's descendants           Sort by:
regulation of cellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 involved_in IDA
IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:12112599)		 Ensembl
UniProt
RGD		 PMID:12112599 PMID:12112599 GO_REF:0000024 GO_REF:0000107, RGD:728364 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687 		JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,079,954...152,087,034
Ensembl chr  X:152,079,865...152,087,034 		JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:22,037,542...22,079,376
Ensembl chr 2:22,037,563...22,065,038 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 TAS RGD PMID:15013950 RGD:1304309 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745 		JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818 		JBrowse link
G Chp2 calcineurin-like EF hand protein 2 TAS RGD PMID:12576672 RGD:1299552 NCBI chr 1:176,757,945...176,772,443
Ensembl chr 1:176,757,876...176,772,139 		JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in ISO (PMID:31978345) RGD PMID:31978345 NCBI chr15:52,390,267...52,407,630
Ensembl chr15:52,395,183...52,407,545 		JBrowse link
G Mafg MAF bZIP transcription factor G IDA RGD PMID:11583919 RGD:633304 NCBI chr10:105,903,307...105,911,845
Ensembl chr10:105,903,237...105,912,026 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO MGI:3774019 (MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:3772751 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within ISO MGI:3528447 (MGI:3588799|PMID:16107722) RGD PMID:16107722 MGI:3588799 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725 		JBrowse link
G Faslg Fas ligand IDA RGD PMID:18045865 RGD:2315735 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215 		JBrowse link
G Rnasek ribonuclease K involved_in ISO UniProtKB:Q15904 (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832 		JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5429843|PMID:21976599)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21976599 GO_REF:0000024 GO_REF:0000107 MGI:5429843 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756 		JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO
IEA		 (PMID:10615049)
GO_REF:0000107		 RGD
Ensembl		 PMID:10615049 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236 		JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5429843|PMID:21976599)		 UniProt
RGD		 PMID:21976599 GO_REF:0000024 MGI:5429843 NCBI chr 6:48,023,892...48,064,829
Ensembl chr 6:48,023,892...48,064,772 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (MGI:5429843|PMID:21976599) RGD PMID:21976599 MGI:5429843 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778 		JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89b G protein-coupled receptor 89B involved_in IBA
ISO		 PMID:21873635
(PMID:18794847)		 RGD PMID:18794847 PMID:21873635 RGD:13792537 NCBI chr 2:184,408,136...184,445,560
Ensembl chr 2:184,401,438...184,445,584 		JBrowse link
G Slc12a5 solute carrier family 12 member 5 IDA RGD PMID:16420452 RGD:2303953 NCBI chr 3:153,696,522...153,735,801
Ensembl chr 3:153,696,517...153,735,765 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(MGI:6219928|PMID:27231233)		 RGD PMID:27140606 PMID:27231233 MGI:6219928 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
G Ttpa alpha tocopherol transfer protein IDA RGD PMID:22147702 RGD:7247589 NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073 		JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO
ISS		 (PMID:32276428)
GO_REF:0000024		 RGD
UniProt		 PMID:32276428 GO_REF:0000024 NCBI chr  X:10,183,983...10,210,948
Ensembl chr  X:10,183,068...10,210,918 		JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IBA		 (PMID:11722572)
PMID:21873635		 RGD PMID:11722572 PMID:21873635 RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438 		JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360 		JBrowse link
G Creg1 cellular repressor of E1A-stimulated genes 1 acts_upstream_of_or_within ISO (MGI:6854654|PMID:33966596) RGD PMID:33966596 MGI:6854654 NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308 		JBrowse link
G Grn granulin precursor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28073925)		 UniProt
Ensembl
RGD		 PMID:28073925 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO
ISS		 (PMID:11722572)
PMID:8895569		 RGD PMID:11722572 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:4879078 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr 4:41,328,125...41,347,315
Ensembl chr 4:41,327,994...41,345,619 		JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
ISS		 (PMID:28296633)
GO_REF:0000024		 RGD
UniProt		 PMID:28296633 GO_REF:0000024 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832 		JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:10924275) RGD PMID:10924275 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in ISO (PMID:25513726), (PMID:32966160) RGD PMID:25513726 PMID:32966160 NCBI chr 1:107,116,278...107,446,093
Ensembl chr 1:107,116,278...107,446,074 		JBrowse link
G Slc45a2 solute carrier family 45, member 2 involved_in ISO (PMID:32966160)
(MGI:7338895|PMID:35469906)		 RGD PMID:32966160 PMID:35469906 MGI:7338895 NCBI chr 2:59,963,599...59,996,408
Ensembl chr 2:59,963,706...59,996,317 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO		 GO_REF:0000024
(PMID:35333573), (PMID:35750034)		 UniProt
RGD		 PMID:35333573 PMID:35750034 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819 		JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in ISO (PMID:10506221) RGD PMID:10506221 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:78,019,337...78,043,529
Ensembl chr16:78,019,337...78,043,529 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:54,088,744...54,105,756
Ensembl chr 8:54,088,129...54,106,483 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS		 (PMID:21255211)
GO_REF:0000024		 RGD
UniProt		 PMID:21255211 GO_REF:0000024 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO MGI:5442794 (MGI:5442671|PMID:22593622) RGD PMID:22593622 MGI:5442671 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) RGD PMID:29779931 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3852642 (MGI:3850356|PMID:19549681) RGD PMID:19549681 MGI:3850356 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin IMP RGD PMID:17762181 RGD:2300343 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17762181 RGD:2300343 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B IMP RGD PMID:17762181 RGD:2300343 NCBI chr13:43,046,960...43,057,110
Ensembl chr13:43,046,267...43,057,792 		JBrowse link
G Car2 carbonic anhydrase 2 acts_upstream_of_or_within IMP
ISO		 MGI:2135646 (MGI:5506965|PMID:23881097) RGD PMID:23881097 PMID:9665810 MGI:5506965, RGD:1342423 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818 		JBrowse link
G Car7 carbonic anhydrase 7 acts_upstream_of_or_within ISO MGI:5543604 (MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:5506965 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467 		JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in IMP
ISO		 PMID:23447592
(MGI:5486513|PMID:23447592)		 RGD PMID:23447592 PMID:23447592 MGI:5486513, RGD:15023469 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250 		JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) RGD PMID:30335141 NCBI chr  X:2,214,064...2,395,052
Ensembl chr  X:2,214,441...2,388,012 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15522866)		 Ensembl
RGD		 PMID:15522866 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471 		JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IEA		 (PMID:17510399)
GO_REF:0000107		 RGD
Ensembl		 PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273 		JBrowse link
G Car2 carbonic anhydrase 2 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:4442131|PMID:20150244)		 UniProt
RGD		 PMID:20150244 PMID:21873635 GO_REF:0000024 MGI:4442131, RGD:13792537 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818 		JBrowse link
G Car7 carbonic anhydrase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467 		JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO
ISS		 (PMID:15035633), (PMID:8901634)
GO_REF:0000024		 RGD
UniProt		 PMID:8901634 PMID:15035633 GO_REF:0000024 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 IMP RGD PMID:24935944 RGD:14985214 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:15990874)
(MGI:4442131|PMID:20150244)
(PMID:20501439)		 RGD PMID:15990874 PMID:20150244 PMID:20501439 MGI:4442131 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in IMP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:16440368 PMID:21873635 RGD:9999231, RGD:13792537 NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965 		JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(MGI:64573|PMID:2686841)
PMID:21873635		 Ensembl
RGD		 PMID:2686841 PMID:21873635 GO_REF:0000107 MGI:64573, RGD:13792537 NCBI chr 9:77,036,243...77,053,940
Ensembl chr 9:77,037,016...77,049,105 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 involved_in
acts_upstream_of		 ISO
IBA		 (PMID:24453308)
(MGI:5295108|PMID:21976511)
(MGI:5553185|PMID:24453308)
PMID:21873635
UniProtKB:Q9JK62 (PMID:10069984), (PMID:21976511)		 RGD PMID:10069984 PMID:21976511 PMID:24453308 PMID:21873635 MGI:5295108 MGI:5553185, RGD:13792537 NCBI chr14:18,841,289...19,293,297
Ensembl chr14:18,845,159...19,272,883 		JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,710,101...115,810,330
Ensembl chr 4:115,725,592...115,810,323 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IBA
ISO		 PMID:21873635
(MGI:3700901|PMID:16439691), (MGI:5506872|PMID:22586225), (MGI:5562523|PMID:23401617)		 RGD PMID:16439691 PMID:22586225 PMID:23401617 PMID:21873635 MGI:3700901 MGI:5506872 MGI:5562523, RGD:13792537 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within
involved_in		 ISO
IDA
IBA		 (PMID:11133997), (PMID:18577713)
PMID:8189393
(MGI:5013899|PMID:21593314)
PMID:21873635		 RGD PMID:11133997 PMID:18577713 PMID:21593314 PMID:8189393 PMID:21873635 MGI:5013899, RGD:155230769, RGD:13792537 NCBI chr 7:131,861,284...131,937,963
Ensembl chr 7:131,864,102...131,931,051 		JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:28,128,740...28,144,554
Ensembl chr18:28,128,740...28,141,543 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in IMP
IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:15035633), (PMID:24840010)		 UniProt
RGD		 PMID:15035633 PMID:24840010 PMID:22387884 PMID:21873635 GO_REF:0000024, RGD:6771326, RGD:13792537 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,932,001...43,014,447
Ensembl chr 9:42,931,346...43,014,444 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,824,468...42,879,767
Ensembl chr 9:42,825,064...42,879,422 		JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:24936055)
PMID:21873635
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24936055 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:33,225,481...33,246,913
Ensembl chr19:33,226,816...33,246,903 		JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:30296617)
(MGI:7387161|PMID:17005858)
(PMID:17005858)
(PMID:28635961), (PMID:30296617)
PMID:21873635		 RGD PMID:17005858 PMID:28635961 PMID:30296617 PMID:21873635 MGI:7387161, RGD:13792537 NCBI chr  X:134,430,588...134,486,747
Ensembl chr  X:134,420,756...134,485,375 		JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:2,214,064...2,395,052
Ensembl chr  X:2,214,441...2,388,012 		JBrowse link
G Slc9a8 solute carrier family 9 member A8 acts_upstream_of_or_within
involved_in		 ISO
IBA
IDA		 (MGI:3529663|PMID:15522866)
(PMID:34288721)
PMID:21873635
PMID:22088432		 RGD PMID:15522866 PMID:34288721 PMID:21873635 PMID:22088432 MGI:3529663, RGD:13792537, RGD:155663543 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in
acts_upstream_of_or_within		 IBA
ISO
ISS		 PMID:21873635
(MGI:7315838|PMID:35716776), (MGI:7387161|PMID:17005858)
(MGI:7387161|PMID:17005858)
(PMID:35716776)
(PMID:17005858), (PMID:35716776)
(PMID:15522866), (PMID:24065030)
GO_REF:0000024		 RGD
UniProt		 PMID:15522866 PMID:17005858 PMID:24065030 PMID:35716776 PMID:21873635 GO_REF:0000024 MGI:7315838 MGI:7387161, RGD:13792537 NCBI chr 8:95,232,889...95,797,262
Ensembl chr 8:95,232,905...95,796,318 		JBrowse link
G Slc9b1 solute carrier family 9 member B1 involved_in ISO (MGI:5883207|PMID:20036903) RGD PMID:20036903 MGI:5883207 NCBI chr 2:223,769,105...223,818,359
Ensembl chr 2:223,769,105...223,818,179 		JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,211,774...55,278,285
Ensembl chr11:55,211,792...55,278,285 		JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISO
IEA		 (PMID:19893578)
GO_REF:0000107		 RGD
Ensembl		 PMID:19893578 GO_REF:0000107 NCBI chr 3:141,627,128...141,675,386
Ensembl chr 3:141,627,346...141,675,386 		JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:16688778 RGD:1598619 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC681325 hypothetical protein LOC681325 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:74,312,698...74,316,311
Ensembl chr  X:74,312,661...74,316,635 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:22012985) RGD PMID:22012985 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Spns1 sphingolipid transporter 1 acts_upstream_of_or_within ISO (MGI:7345668|PMID:36161949) RGD PMID:36161949 MGI:7345668 NCBI chr 1:180,942,088...180,949,415
Ensembl chr 1:180,942,088...180,949,370 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IBA
ISO		 PMID:21873635
(PMID:31001245)		 RGD PMID:31001245 PMID:21873635 RGD:13792537 NCBI chr  X:50,403,962...50,423,141
Ensembl chr  X:50,361,248...50,423,269 		JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO
ISS		 (PMID:23569283)
GO_REF:0000024		 RGD
UniProt		 PMID:23569283 GO_REF:0000024 NCBI chr14:31,993,489...32,018,717
Ensembl chr14:31,993,493...32,018,717 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5693670|PMID:26317472)		 UniProt
RGD		 PMID:26317472 GO_REF:0000024 MGI:5693670 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO
IEA
ISS		 (PMID:28013294)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28013294 GO_REF:0000024 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393 		JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:66,760,159...66,842,110
Ensembl chr 4:66,760,159...66,842,110 		JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,403,352...33,447,357
Ensembl chr19:33,403,355...33,447,450 		JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:33,336,257...33,385,354
Ensembl chr 5:33,336,264...33,385,354 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in TAS
IBA		 PMID:21873635 RGD
GO_Central		 PMID:15013950 PMID:21873635 RGD:1304309, RGD:13792537 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745 		JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)		 Ensembl
RGD		 PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452 		JBrowse link
G Dmxl1 Dmx-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:42,993,292...43,163,457
Ensembl chr18:42,993,340...43,163,456 		JBrowse link
G Dmxl2 Dmx-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO MGI:2446573 (MGI:3654884|PMID:11067873), (MGI:3690711|PMID:9670047), (MGI:3839054|PMID:18984740) RGD PMID:9670047 PMID:11067873 PMID:18984740 MGI:3654884 MGI:3690711 MGI:3839054 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    biological regulation 13573
      regulation of pH 102
        regulation of cellular pH 89
          regulation of intracellular pH + 80
Path 2
Term Annotations click to browse term
  biological_process 19898
    homeostatic process 1921
      chemical homeostasis 1188
        monoatomic ion homeostasis 676
          monoatomic cation homeostasis 664
            regulation of pH 102
              regulation of cellular pH 89
                regulation of intracellular pH + 80
paths to the root