Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cellular pH
go back to main search page
Accession:GO:0030641 term browser browse the term
Definition:Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.
Synonyms:exact_synonym: cellular hydrogen ion homeostasis;   proton homeostasis



show annotations for term's descendants           Sort by:
regulation of cellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 involved_in IDA
IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12112599)
Ensembl
UniProt
RGD
PMID:12112599 PMID:12112599 GO_REF:0000024 GO_REF:0000107, RGD:728364 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687
JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,079,954...152,087,034
Ensembl chr  X:152,079,865...152,087,034
JBrowse link
G Atp6ap1l ATPase H+ transporting accessory protein 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:22,037,542...22,079,376
Ensembl chr 2:22,037,563...22,065,038
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 TAS RGD PMID:15013950 RGD:1304309 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745
JBrowse link
G Car2 carbonic anhydrase 2 TAS RGD PMID:9665810 RGD:1342423 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 TAS RGD PMID:12576672 RGD:1299552 NCBI chr 1:176,757,945...176,772,443
Ensembl chr 1:176,757,876...176,772,139
JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267
JBrowse link
G Lacc1 laccase domain containing 1 involved_in ISO (PMID:31978345) RGD PMID:31978345 NCBI chr15:52,390,267...52,407,630
Ensembl chr15:52,395,183...52,407,545
JBrowse link
G Mafg MAF bZIP transcription factor G IDA RGD PMID:11583919 RGD:633304 NCBI chr10:105,903,307...105,911,845
Ensembl chr10:105,903,237...105,912,026
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174) RGD PMID:26375174 MGI:5707553 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO MGI:3774019 (MGI:3772751|PMID:18165320) RGD PMID:18165320 MGI:3772751 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within ISO MGI:3528447 (MGI:3588799|PMID:16107722) RGD PMID:16107722 MGI:3588799 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725
JBrowse link
G Faslg Fas ligand IDA RGD PMID:18045865 RGD:2315735 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Rnasek ribonuclease K involved_in ISO UniProtKB:Q15904 (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601
JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832
JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5429843|PMID:21976599)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21976599 GO_REF:0000024 GO_REF:0000107 MGI:5429843 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO
IEA
(PMID:10615049)
GO_REF:0000107
RGD
Ensembl
PMID:10615049 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5429843|PMID:21976599)
UniProt
RGD
PMID:21976599 GO_REF:0000024 MGI:5429843 NCBI chr 6:48,023,892...48,064,829
Ensembl chr 6:48,023,892...48,064,772
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (MGI:5429843|PMID:21976599) RGD PMID:21976599 MGI:5429843 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89b G protein-coupled receptor 89B involved_in IBA
ISO
PMID:21873635
(PMID:18794847)
RGD PMID:18794847 PMID:21873635 RGD:13792537 NCBI chr 2:184,408,136...184,445,560
Ensembl chr 2:184,401,438...184,445,584
JBrowse link
G Slc12a5 solute carrier family 12 member 5 IDA RGD PMID:16420452 RGD:2303953 NCBI chr 3:153,696,522...153,735,801
Ensembl chr 3:153,696,517...153,735,765
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(MGI:6219928|PMID:27231233)
RGD PMID:27140606 PMID:27231233 MGI:6219928 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
G Ttpa alpha tocopherol transfer protein IDA RGD PMID:22147702 RGD:7247589 NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO
ISS
(PMID:32276428)
GO_REF:0000024
RGD
UniProt
PMID:32276428 GO_REF:0000024 NCBI chr  X:10,183,983...10,210,948
Ensembl chr  X:10,183,068...10,210,918
JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IBA
(PMID:11722572)
PMID:21873635
RGD PMID:11722572 PMID:21873635 RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360
JBrowse link
G Creg1 cellular repressor of E1A-stimulated genes 1 acts_upstream_of_or_within ISO (MGI:6854654|PMID:33966596) RGD PMID:33966596 MGI:6854654 NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308
JBrowse link
G Grn granulin precursor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28073925)
UniProt
Ensembl
RGD
PMID:28073925 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO
ISS
(PMID:11722572)
PMID:8895569
RGD PMID:11722572 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:4879078 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr 4:41,328,125...41,347,315
Ensembl chr 4:41,327,994...41,345,619
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
ISS
(PMID:28296633)
GO_REF:0000024
RGD
UniProt
PMID:28296633 GO_REF:0000024 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108
JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832
JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:10924275) RGD PMID:10924275 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in ISO (PMID:25513726), (PMID:32966160) RGD PMID:25513726 PMID:32966160 NCBI chr 1:107,116,278...107,446,093
Ensembl chr 1:107,116,278...107,446,074
JBrowse link
G Slc45a2 solute carrier family 45, member 2 involved_in ISO (PMID:32966160)
(MGI:7338895|PMID:35469906)
RGD PMID:32966160 PMID:35469906 MGI:7338895 NCBI chr 2:59,963,599...59,996,408
Ensembl chr 2:59,963,706...59,996,317
JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(PMID:35333573), (PMID:35750034)
UniProt
RGD
PMID:35333573 PMID:35750034 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819
JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in ISO (PMID:10506221) RGD PMID:10506221 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:78,019,337...78,043,529
Ensembl chr16:78,019,337...78,043,529
JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924
JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:54,088,744...54,105,756
Ensembl chr 8:54,088,129...54,106,483
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS
(PMID:21255211)
GO_REF:0000024
RGD
UniProt
PMID:21255211 GO_REF:0000024 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO MGI:5442794 (MGI:5442671|PMID:22593622) RGD PMID:22593622 MGI:5442671 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) RGD PMID:29779931 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3852642 (MGI:3850356|PMID:19549681) RGD PMID:19549681 MGI:3850356 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin IMP RGD PMID:17762181 RGD:2300343 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17762181 RGD:2300343 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Avpr1b arginine vasopressin receptor 1B IMP RGD PMID:17762181 RGD:2300343 NCBI chr13:43,046,960...43,057,110
Ensembl chr13:43,046,267...43,057,792
JBrowse link
G Car2 carbonic anhydrase 2 acts_upstream_of_or_within IMP
ISO
MGI:2135646 (MGI:5506965|PMID:23881097) RGD PMID:23881097 PMID:9665810 MGI:5506965, RGD:1342423 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Car7 carbonic anhydrase 7 acts_upstream_of_or_within ISO MGI:5543604 (MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:5506965 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467
JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in IMP
ISO
PMID:23447592
(MGI:5486513|PMID:23447592)
RGD PMID:23447592 PMID:23447592 MGI:5486513, RGD:15023469 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) RGD PMID:30335141 NCBI chr  X:2,214,064...2,395,052
Ensembl chr  X:2,214,441...2,388,012
JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA
ISO
GO_REF:0000107
(PMID:15522866)
Ensembl
RGD
PMID:15522866 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471
JBrowse link
regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IEA
(PMID:17510399)
GO_REF:0000107
RGD
Ensembl
PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
JBrowse link
G Car2 carbonic anhydrase 2 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4442131|PMID:20150244)
UniProt
RGD
PMID:20150244 PMID:21873635 GO_REF:0000024 MGI:4442131, RGD:13792537 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Car7 carbonic anhydrase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO
ISS
(PMID:15035633), (PMID:8901634)
GO_REF:0000024
RGD
UniProt
PMID:8901634 PMID:15035633 GO_REF:0000024 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 IMP RGD PMID:24935944 RGD:14985214 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:15990874)
(MGI:4442131|PMID:20150244)
(PMID:20501439)
RGD PMID:15990874 PMID:20150244 PMID:20501439 MGI:4442131 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117
JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:16440368 PMID:21873635 RGD:9999231, RGD:13792537 NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:64573|PMID:2686841)
PMID:21873635
Ensembl
RGD
PMID:2686841 PMID:21873635 GO_REF:0000107 MGI:64573, RGD:13792537 NCBI chr 9:77,036,243...77,053,940
Ensembl chr 9:77,037,016...77,049,105
JBrowse link
G Slc4a4 solute carrier family 4 member 4 involved_in
acts_upstream_of
ISO
IBA
(PMID:24453308)
(MGI:5295108|PMID:21976511)
(MGI:5553185|PMID:24453308)
PMID:21873635
UniProtKB:Q9JK62 (PMID:10069984), (PMID:21976511)
RGD PMID:10069984 PMID:21976511 PMID:24453308 PMID:21873635 MGI:5295108 MGI:5553185, RGD:13792537 NCBI chr14:18,841,289...19,293,297
Ensembl chr14:18,845,159...19,272,883
JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,710,101...115,810,330
Ensembl chr 4:115,725,592...115,810,323
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in IBA
ISO
PMID:21873635
(MGI:3700901|PMID:16439691), (MGI:5506872|PMID:22586225), (MGI:5562523|PMID:23401617)
RGD PMID:16439691 PMID:22586225 PMID:23401617 PMID:21873635 MGI:3700901 MGI:5506872 MGI:5562523, RGD:13792537 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within
involved_in
ISO
IDA
IBA
(PMID:11133997), (PMID:18577713)
PMID:8189393
(MGI:5013899|PMID:21593314)
PMID:21873635
RGD PMID:11133997 PMID:18577713 PMID:21593314 PMID:8189393 PMID:21873635 MGI:5013899, RGD:155230769, RGD:13792537 NCBI chr 7:131,861,284...131,937,963
Ensembl chr 7:131,864,102...131,931,051
JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:28,128,740...28,144,554
Ensembl chr18:28,128,740...28,141,543
JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in IMP
IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:15035633), (PMID:24840010)
UniProt
RGD
PMID:15035633 PMID:24840010 PMID:22387884 PMID:21873635 GO_REF:0000024, RGD:6771326, RGD:13792537 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,932,001...43,014,447
Ensembl chr 9:42,931,346...43,014,444
JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417
JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,824,468...42,879,767
Ensembl chr 9:42,825,064...42,879,422
JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:24936055)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24936055 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:33,225,481...33,246,913
Ensembl chr19:33,226,816...33,246,903
JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:30296617)
(MGI:7387161|PMID:17005858)
(PMID:17005858)
(PMID:28635961), (PMID:30296617)
PMID:21873635
RGD PMID:17005858 PMID:28635961 PMID:30296617 PMID:21873635 MGI:7387161, RGD:13792537 NCBI chr  X:134,430,588...134,486,747
Ensembl chr  X:134,420,756...134,485,375
JBrowse link
G Slc9a7 solute carrier family 9 member A7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:2,214,064...2,395,052
Ensembl chr  X:2,214,441...2,388,012
JBrowse link
G Slc9a8 solute carrier family 9 member A8 acts_upstream_of_or_within
involved_in
ISO
IBA
IDA
(MGI:3529663|PMID:15522866)
(PMID:34288721)
PMID:21873635
PMID:22088432
RGD PMID:15522866 PMID:34288721 PMID:21873635 PMID:22088432 MGI:3529663, RGD:13792537, RGD:155663543 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471
JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(MGI:7315838|PMID:35716776), (MGI:7387161|PMID:17005858)
(MGI:7387161|PMID:17005858)
(PMID:35716776)
(PMID:17005858), (PMID:35716776)
(PMID:15522866), (PMID:24065030)
GO_REF:0000024
RGD
UniProt
PMID:15522866 PMID:17005858 PMID:24065030 PMID:35716776 PMID:21873635 GO_REF:0000024 MGI:7315838 MGI:7387161, RGD:13792537 NCBI chr 8:95,232,889...95,797,262
Ensembl chr 8:95,232,905...95,796,318
JBrowse link
G Slc9b1 solute carrier family 9 member B1 involved_in ISO (MGI:5883207|PMID:20036903) RGD PMID:20036903 MGI:5883207 NCBI chr 2:223,769,105...223,818,359
Ensembl chr 2:223,769,105...223,818,179
JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,211,774...55,278,285
Ensembl chr11:55,211,792...55,278,285
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISO
IEA
(PMID:19893578)
GO_REF:0000107
RGD
Ensembl
PMID:19893578 GO_REF:0000107 NCBI chr 3:141,627,128...141,675,386
Ensembl chr 3:141,627,346...141,675,386
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:16688778 RGD:1598619 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC681325 hypothetical protein LOC681325 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:74,312,698...74,316,311
Ensembl chr  X:74,312,661...74,316,635
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:22012985) RGD PMID:22012985 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Spns1 sphingolipid transporter 1 acts_upstream_of_or_within ISO (MGI:7345668|PMID:36161949) RGD PMID:36161949 MGI:7345668 NCBI chr 1:180,942,088...180,949,415
Ensembl chr 1:180,942,088...180,949,370
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IBA
ISO
PMID:21873635
(PMID:31001245)
RGD PMID:31001245 PMID:21873635 RGD:13792537 NCBI chr  X:50,403,962...50,423,141
Ensembl chr  X:50,361,248...50,423,269
JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO
ISS
(PMID:23569283)
GO_REF:0000024
RGD
UniProt
PMID:23569283 GO_REF:0000024 NCBI chr14:31,993,489...32,018,717
Ensembl chr14:31,993,493...32,018,717
JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(MGI:5693670|PMID:26317472)
UniProt
RGD
PMID:26317472 GO_REF:0000024 MGI:5693670 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO
IEA
ISS
(PMID:28013294)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28013294 GO_REF:0000024 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:66,760,159...66,842,110
Ensembl chr 4:66,760,159...66,842,110
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,403,352...33,447,357
Ensembl chr19:33,403,355...33,447,450
JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:33,336,257...33,385,354
Ensembl chr 5:33,336,264...33,385,354
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:15013950 PMID:21873635 RGD:1304309, RGD:13792537 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Dmxl1 Dmx-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:42,993,292...43,163,457
Ensembl chr18:42,993,340...43,163,456
JBrowse link
G Dmxl2 Dmx-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO MGI:2446573 (MGI:3654884|PMID:11067873), (MGI:3690711|PMID:9670047), (MGI:3839054|PMID:18984740) RGD PMID:9670047 PMID:11067873 PMID:18984740 MGI:3654884 MGI:3690711 MGI:3839054 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    biological regulation 13573
      regulation of pH 102
        regulation of cellular pH 89
          regulation of intracellular pH + 80
Path 2
Term Annotations click to browse term
  biological_process 19898
    homeostatic process 1921
      chemical homeostasis 1188
        monoatomic ion homeostasis 676
          monoatomic cation homeostasis 664
            regulation of pH 102
              regulation of cellular pH 89
                regulation of intracellular pH + 80
paths to the root