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ONTOLOGY REPORT - ANNOTATIONS


Term:female genitalia development
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Accession:GO:0030540 term browser browse the term
Definition:The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure.
Synonyms:exact_synonym: female genital development


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female genitalia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3511552|MGI:3588650|MGI:3588652 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154536 (MGI:1261712|PMID:9618522)
Ensembl
RGD
PMID:9618522 GO_REF:0000107 MGI:1261712 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 6:25,279,635...25,315,501
Ensembl chr 6:25,279,626...25,315,511
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
ISS
(PMID:12116211)
GO_REF:0000024
RGD
UniProt
PMID:12116211 GO_REF:0000024 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
female genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3613320|PMID:12004962) RGD PMID:12004962 MGI:3613320 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (MGI:2387879|PMID:12368184) RGD PMID:12368184 MGI:2387879 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
vagina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:96965 (MGI:3820485|PMID:18393392) RGD PMID:18393392 MGI:3820485 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (MGI:1929371|PMID:11163212) RGD PMID:11163212 MGI:1929371 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1097161 (MGI:1929371|PMID:11163212)
Ensembl
RGD
PMID:11163212 GO_REF:0000107 MGI:1929371 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109392 (MGI:1889238|PMID:10976058)
Ensembl
RGD
PMID:10976058 GO_REF:0000107 MGI:1889238 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:1352467 (MGI:1889238|PMID:10976058) RGD PMID:10976058 MGI:1889238 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3777712|PMID:14695376)
UniProt
RGD
PMID:14695376 GO_REF:0000024 MGI:3777712 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3690825|PMID:16143106)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16143106 GO_REF:0000024 GO_REF:0000107 MGI:3690825 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:1347244 (MGI:3820485|PMID:18393392) RGD PMID:18393392 MGI:3820485 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO MGI:1931860 (MGI:1859522|PMID:11015591) RGD PMID:11015591 MGI:1859522 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347244|MGI:96965 (MGI:3820485|PMID:18393392)
Ensembl
RGD
PMID:18393392 GO_REF:0000107 MGI:3820485 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857617 (MGI:3039991|PMID:15073149)
Ensembl
RGD
PMID:15073149 GO_REF:0000107 MGI:3039991 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    multicellular organismal process 8913
      multicellular organism development 5741
        female sex differentiation 184
          female genitalia development 20
            female genitalia morphogenesis + 3
            imaginal disc-derived female genitalia development + 0
            vagina development 12
Path 2
Term Annotations click to browse term
  biological_process 19634
    developmental process 6783
      anatomical structure development 6259
        multicellular organism development 5741
          system development 5284
            reproductive system development 589
              reproductive structure development 584
                genitalia development 53
                  female genitalia development 20
                    female genitalia morphogenesis + 3
                    imaginal disc-derived female genitalia development + 0
                    vagina development 12
paths to the root