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ONTOLOGY REPORT - ANNOTATIONS


Term:female genitalia development
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Accession:GO:0030540 term browser browse the term
Definition:The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure.
Synonyms:exact_synonym: female genital development



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female genitalia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3511552|MGI:3588650|MGI:3588652 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154536 (MGI:1261712|PMID:9618522)
Ensembl
RGD
PMID:9618522 GO_REF:0000107 MGI:1261712 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
ISS
(PMID:12116211)
GO_REF:0000024
RGD
UniProt
PMID:12116211 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
female genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3613320|PMID:12004962) RGD PMID:12004962 MGI:3613320 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (MGI:2387879|PMID:12368184) RGD PMID:12368184 MGI:2387879 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
vagina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:96965 (MGI:3820485|PMID:18393392) RGD PMID:18393392 MGI:3820485 NCBI chr 1:81,265,656...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (MGI:1929371|PMID:11163212) RGD PMID:11163212 MGI:1929371 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (MGI:1929371|PMID:11163212) RGD PMID:11163212 MGI:1929371 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109392 (MGI:1889238|PMID:10976058)
Ensembl
RGD
PMID:10976058 GO_REF:0000107 MGI:1889238 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:1352467 (MGI:1889238|PMID:10976058) RGD PMID:10976058 MGI:1889238 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3777712|PMID:14695376)
UniProt
RGD
PMID:14695376 GO_REF:0000024 MGI:3777712 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3690825|PMID:16143106)
UniProt
RGD
PMID:16143106 GO_REF:0000024 MGI:3690825 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:1347244 (MGI:3820485|PMID:18393392) RGD PMID:18393392 MGI:3820485 NCBI chr 3:115,939,351...116,045,141
Ensembl chr 3:115,939,351...116,046,554
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO MGI:1931860 (MGI:1859522|PMID:11015591) RGD PMID:11015591 MGI:1859522 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO MGI:1347244|MGI:96965 (MGI:3820485|PMID:18393392) RGD PMID:18393392 MGI:3820485 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:3039991|PMID:15073149) RGD PMID:15073149 MGI:3039991 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    multicellular organismal process 8936
      multicellular organism development 5225
        female sex differentiation 187
          female genitalia development 20
            female genitalia morphogenesis + 3
            imaginal disc-derived female genitalia development + 0
            vagina development 12
Path 2
Term Annotations click to browse term
  biological_process 20099
    developmental process 7010
      anatomical structure development 6447
        multicellular organism development 5225
          system development 4486
            reproductive system development 427
              reproductive structure development 422
                genitalia development 53
                  female genitalia development 20
                    female genitalia morphogenesis + 3
                    imaginal disc-derived female genitalia development + 0
                    vagina development 12
paths to the root