Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:male genitalia development
go back to main search page
Accession:GO:0030539 term browser browse the term
Definition:The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.
Synonyms:exact_synonym: male genital development


show annotations for term's descendants           Sort by:
 
male genitalia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASB1 ankyrin repeat and SOCS box containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2149489|PMID:11509662) Ensembl
MGI
Ensembl		 PMID:11509662 GO_REF:0000107 MGI:2149489 NCBI chr15:137,931,419...137,952,050
Ensembl chr15:137,931,774...137,952,046 		JBrowse link
G BMP5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO (MGI:1270957|PMID:9664685) MGI PMID:9664685 MGI:1270957 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1270957|PMID:9664685) Ensembl
Ensembl
MGI		 PMID:9664685 GO_REF:0000107 MGI:1270957 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3845460|PMID:19282366) Ensembl
Ensembl
MGI		 PMID:19282366 GO_REF:0000107 MGI:3845460 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2686848|PMID:14684813) MGI
Ensembl		 PMID:14684813 GO_REF:0000107 MGI:2686848 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,519,061 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2662001|PMID:12783783) Ensembl
Ensembl
MGI		 PMID:12783783 GO_REF:0000107 MGI:2662001 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr 6:106,545,882...106,693,711
Ensembl chr 6:106,419,943...106,691,625 		JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2662001|PMID:12783783) Ensembl
Ensembl
MGI		 PMID:12783783 GO_REF:0000107 MGI:2662001 NCBI chr18:45,373,340...45,379,046
Ensembl chr18:45,373,440...45,376,325 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:63627|PMID:8106170) Ensembl
Ensembl
MGI		 PMID:8106170 GO_REF:0000107 MGI:63627 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G HSD17B3 hydroxysteroid 17-beta dehydrogenase 3 involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr10:25,822,913...25,866,871
Ensembl chr10:25,822,913...25,866,871 		JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3617054|PMID:16406039) Ensembl
Ensembl
MGI		 PMID:16406039 GO_REF:0000107 MGI:3617054 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2653677|PMID:12651897) Ensembl
Ensembl
MGI		 PMID:12651897 GO_REF:0000107 MGI:2653677 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G RASA1 RAS p21 protein activator 1 ISO RGD PMID:20933506 RGD:9999420 NCBI chr 2:94,879,615...94,992,725
Ensembl chr 2:94,878,911...94,993,450 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:23895974 RGD:11537370 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2152294|PMID:11684660) Ensembl
Ensembl
MGI		 PMID:11684660 GO_REF:0000107 MGI:2152294 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3689142|PMID:16932809) MGI PMID:16932809 MGI:3689142 NCBI chr13:119,668,476...119,669,435
Ensembl chr13:119,668,476...119,669,435 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:9142501 RGD:4892034 NCBI chr16:75,309,830...75,335,438
Ensembl chr16:75,310,211...75,335,391 		JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2153626|PMID:11606430) Ensembl
Ensembl
MGI
RGD		 PMID:9142501 PMID:11606430 GO_REF:0000107 MGI:2153626 RGD:4892034 NCBI chr 3:107,840,200...107,918,351
Ensembl chr 3:107,840,200...107,918,350 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO (MGI:3794139|PMID:18283110) MGI PMID:18283110 MGI:3794139 NCBI chr15:54,210,139...54,277,609 JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI		 PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,046...17,733,431 		JBrowse link
G WT1 WT1 transcription factor involved_in ISS UniProt
UniProt		 GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
male genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3845460|PMID:19282366) Ensembl
MGI
Ensembl		 PMID:19282366 GO_REF:0000107 MGI:3845460 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,800,677 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3613320|PMID:12004962) Ensembl
MGI
Ensembl		 PMID:12004962 GO_REF:0000107 MGI:3613320 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G KLHL10 kelch like family member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3040865|PMID:15136734) Ensembl
MGI
Ensembl		 PMID:15136734 GO_REF:0000107 MGI:3040865 NCBI chr12:20,851,168...20,862,183
Ensembl chr12:20,854,407...20,861,662 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:12533405 RGD:2306308 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SYCP2 synaptonemal complex protein 2 acts_upstream_of_or_within ISO (MGI:3653558|PMID:16717126) MGI PMID:16717126 MGI:3653558 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17341
    multicellular organismal process 8333
      multicellular organism development 5037
        male sex differentiation 230
          male genitalia development 26
            male genitalia morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 17341
    developmental process 6677
      anatomical structure development 6215
        multicellular organism development 5037
          system development 4357
            reproductive system development 419
              reproductive structure development 414
                genitalia development 54
                  male genitalia development 26
                    male genitalia morphogenesis + 5
paths to the root