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ONTOLOGY REPORT - ANNOTATIONS


Term:male genitalia development
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Accession:GO:0030539 term browser browse the term
Definition:The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.
Synonyms:exact_synonym: male genital development



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male genitalia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asb1 ankyrin repeat and SOCS box-containing 1 acts_upstream_of_or_within ISO MGI:2178847 (MGI:2149489|PMID:11509662) RGD PMID:11509662 MGI:2149489 NCBI chr 9:92,120,332...92,140,790
Ensembl chr 9:92,120,306...92,136,376
JBrowse link
G Bmp5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO MGI:88182 (MGI:1270957|PMID:9664685) RGD PMID:9664685 MGI:1270957 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within ISO MGI:88181 (MGI:1270957|PMID:9664685) RGD PMID:9664685 MGI:1270957 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148594 (MGI:3845460|PMID:19282366)
Ensembl
RGD
PMID:19282366 GO_REF:0000107 MGI:3845460 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO MGI:3027024 (MGI:2686848|PMID:14684813) RGD PMID:14684813 MGI:2686848 NCBI chr 5:121,344,637...121,368,853
Ensembl chr 5:121,344,575...121,371,137
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:2662001|PMID:12783783) RGD PMID:12783783 MGI:2662001 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:6094060 NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:2662001|PMID:12783783) RGD PMID:12783783 MGI:2662001 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857871 (MGI:63627|PMID:8106170) RGD PMID:8106170 MGI:63627 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3052121 (MGI:3617054|PMID:16406039) RGD PMID:16406039 MGI:3617054 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926714 (MGI:2653677|PMID:12651897)
Ensembl
RGD
PMID:12651897 GO_REF:0000107 MGI:2653677 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Rasa1 RAS p21 protein activator 1 IEP RGD PMID:20933506 RGD:9999420 NCBI chr 2:15,857,704...15,940,757
Ensembl chr 2:15,857,980...15,940,854
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IEP RGD PMID:23895974 RGD:11537370 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857796 (MGI:2152294|PMID:11684660)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11684660 GO_REF:0000024 GO_REF:0000107 MGI:2152294 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2449045 (MGI:3689142|PMID:16932809) RGD PMID:16932809 MGI:3689142 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 acts_upstream_of_or_within TAS
ISO
IEP
MGI:2178039 (MGI:2153626|PMID:11606430) RGD PMID:11606430 PMID:1527072 PMID:9142501 MGI:2153626, RGD:729939, RGD:4892034 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:12116211)
UniProt
RGD
PMID:12116211 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO MGI:3526165 (MGI:3794139|PMID:18283110) RGD PMID:18283110 MGI:3794139 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:1332959|PMID:10077614)
UniProt
RGD
PMID:10077614 GO_REF:0000024 MGI:1332959 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
male genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2681507 (MGI:3845460|PMID:19282366)
Ensembl
RGD
PMID:19282366 GO_REF:0000107 MGI:3845460 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3613320|PMID:12004962) RGD PMID:12004962 MGI:3613320 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Klhl10 kelch-like family member 10 acts_upstream_of_or_within ISO MGI:3040869 (MGI:3040865|PMID:15136734) RGD PMID:15136734 MGI:3040865 NCBI chr10:85,376,442...85,392,720
Ensembl chr10:85,376,442...85,392,720
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:12533405 RGD:2306308 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sycp2 synaptonemal complex protein 2 acts_upstream_of_or_within ISO MGI:3526164 (MGI:3653558|PMID:16717126) RGD PMID:16717126 MGI:3653558 NCBI chr 3:165,431,715...165,502,134
Ensembl chr 3:165,436,331...165,498,789
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    multicellular organismal process 9104
      multicellular organism development 5800
        male sex differentiation 237
          male genitalia development 26
            male genitalia morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure development 6376
        multicellular organism development 5800
          system development 5439
            reproductive system development 601
              reproductive structure development 596
                genitalia development 53
                  male genitalia development 26
                    male genitalia morphogenesis + 5
paths to the root