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ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular receptor signaling pathway
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Accession:GO:0030522 term browser browse the term
Definition:The series of molecular signals initiated by a ligand binding to a receptor located within a cell.
Synonyms:exact_synonym: intracellular receptor mediated signaling pathway;   intracellular receptor-mediated signalling pathway



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intracellular receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:28,993,634...29,088,673
Ensembl chr 1:28,993,634...29,088,673
JBrowse link
G Ar androgen receptor involved_in ISS
ISO
GO_REF:0000024
(PMID:17277772)
UniProt
RGD
PMID:17277772 GO_REF:0000024 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Esrra estrogen related receptor, alpha involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268
JBrowse link
G Esrrb estrogen-related receptor beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IMP RGD PMID:16086034 RGD:1626619 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnf4g hepatocyte nuclear factor 4, gamma involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:97,885,773...98,036,954
Ensembl chr 2:97,887,432...98,036,592
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3038048|PMID:14739254)
GOC
RGD
PMID:14739254 GO_REF:0000108 MGI:3038048 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (MGI:5306122|PMID:21757002) RGD PMID:21757002 MGI:5306122 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nr1h5 nuclear receptor subfamily 1, group H, member 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:190,461,036...190,481,420
Ensembl chr 2:190,462,256...190,481,211
JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:62,460,213...62,496,665
Ensembl chr11:62,460,213...62,496,658
JBrowse link
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:83,632,940...83,638,193
Ensembl chr13:83,632,899...83,637,906
JBrowse link
G Nr2c1 nuclear receptor subfamily 2, group C, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:28,715,347...28,768,624
Ensembl chr 7:28,715,562...28,767,160
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:60,365,581...60,373,383
Ensembl chr 8:60,366,124...60,373,163
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:22,495,109...22,683,132
Ensembl chr 3:22,496,943...22,683,131
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:19965867) RGD PMID:19965867 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
JBrowse link
G Rorc RAR-related orphan receptor C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Rxrb retinoid X receptor beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma acts_upstream_of_or_within ISO (MGI:50850|PMID:1312497) RGD PMID:1312497 MGI:50850 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:17324931) RGD PMID:17324931 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Thra thyroid hormone receptor alpha involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thrb thyroid hormone receptor beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3716756 (MGI:3714080|PMID:17317769)
Ensembl
RGD
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Andpro androgen regulated protein IMP RGD PMID:8262963 RGD:1566559 NCBI chr 3:136,718,601...136,725,131
Ensembl chr 3:136,718,602...136,724,966
JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within
NOT|involved_in
IMP
ISO
(PMID:10428808), (PMID:12799378), (PMID:19886863), (PMID:20048160)
(MGI:3047515|PMID:15199138), (MGI:3529739|PMID:15660130)
(MGI:5882884|PMID:18761815)
(PMID:10428808), (PMID:19886863), (PMID:20048160)
(PMID:19244107)
RGD PMID:10428808 PMID:12799378 PMID:15199138 PMID:15660130 PMID:18761815 More... MGI:3047515 MGI:3529739 MGI:5882884, RGD:1298681 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in ISO (PMID:12200431) RGD PMID:12200431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Cst11 cystatin 11 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:136,211,414...136,214,138
Ensembl chr 3:136,211,414...136,214,138
JBrowse link
G Daxx death-domain associated protein involved_in ISO (PMID:15572661) RGD PMID:15572661 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO
IEA
(PMID:24275493)
GO_REF:0000107
RGD
Ensembl
PMID:24275493 GO_REF:0000107 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:24275493) RGD PMID:24275493 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 acts_upstream_of_or_within ISO MGI:3573790 (MGI:3529739|PMID:15660130) RGD PMID:15660130 MGI:3529739 NCBI chr 5:55,842,414...55,853,326
Ensembl chr 5:55,842,426...55,853,967
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of ISO MGI:2152217 (MGI:3761900|PMID:12370428) RGD PMID:12370428 MGI:3761900 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 acts_upstream_of_or_within ISO MGI:3690438 (MGI:3708425|PMID:17142810) RGD PMID:17142810 MGI:3708425 NCBI chr 4:161,703,379...161,711,833
Ensembl chr 4:161,703,379...161,711,833
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of ISO MGI:2152423 (MGI:3822220|PMID:18827067) RGD PMID:18827067 MGI:3822220 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Kdm3a lysine demethylase 3A involved_in ISO
IEA
(PMID:16603237)
GO_REF:0000107
RGD
Ensembl
PMID:16603237 GO_REF:0000107 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19886863)
UniProt
RGD
PMID:19886863 GO_REF:0000024 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 IMP RGD PMID:9920921 RGD:70792 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:3616918|PMID:16254014) RGD PMID:16254014 MGI:3616918 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhox10 reproductive homeobox 10 involved_in ISO (PMID:11980563) RGD PMID:11980563 NCBI chr  X:116,850,460...116,854,898
Ensembl chr  X:116,850,460...116,854,941
JBrowse link
G Rhox13 Rhox homeobox family member 13 involved_in ISO (PMID:11980563) RGD PMID:11980563 NCBI chr  X:116,911,157...116,917,938
Ensembl chr  X:116,911,329...116,917,644
JBrowse link
G Rwdd1 RWD domain containing 1 involved_in ISO (MGI:5882884|PMID:18761815) RGD PMID:18761815 MGI:5882884 NCBI chr20:25,949,723...25,967,147
Ensembl chr20:25,941,966...25,967,193
JBrowse link
G Scgb2a1 secretoglobin, family 2A, member 1 involved_in ISO
IBA
(PMID:16020486)
PMID:21873635
RGD PMID:16020486 PMID:21873635 RGD:13792537 NCBI chr 1:206,497,848...206,501,211
Ensembl chr 1:206,497,849...206,501,211
Ensembl chr 1:206,497,849...206,501,211
JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in ISO (PMID:10428808) RGD PMID:10428808 NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629
JBrowse link
G Ube3a ubiquitin protein ligase E3A acts_upstream_of_or_within ISO PR:P19091 (MGI:3616918|PMID:16254014) RGD PMID:16254014 MGI:3616918 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:14609956) RGD PMID:14609956 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
JBrowse link
cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha-kinase 1 involved_in ISO
IBA
(PMID:28222186), (PMID:28877472), (PMID:30111836)
PMID:21873635
(MGI:6196443|PMID:30111836)
RGD PMID:28222186 PMID:28877472 PMID:30111836 PMID:21873635 MGI:6196443, RGD:13792537 NCBI chr 2:216,126,939...216,247,180
Ensembl chr 2:216,128,825...216,247,157
JBrowse link
G Tifa TRAF-interacting protein with forkhead-associated domain involved_in ISO
ISS
IBA
(PMID:26068852), (PMID:28222186), (PMID:28877472), (PMID:30111836)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:26068852 PMID:28222186 PMID:28877472 PMID:30111836 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:216,257,926...216,267,635
Ensembl chr 2:216,234,774...216,267,841
JBrowse link
cytoplasmic pattern recognition receptor signaling pathway in response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx58 DEXH-box helicase 58 involved_in ISO (PMID:19211564) RGD PMID:19211564 NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
JBrowse link
glucocorticoid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A involved_in ISO (PMID:12200431) RGD PMID:12200431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:8649367) RGD PMID:8649367 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857745 (MGI:1336546|PMID:10224232), (MGI:3047515|PMID:15199138), (MGI:74913|PMID:7628695)
GO_REF:0000107
(MGI:5616008|PMID:25510864)
RGD
Ensembl
PMID:7628695 PMID:10224232 PMID:15199138 PMID:25510864 GO_REF:0000107 MGI:1336546 MGI:3047515 MGI:5616008 MGI:74913 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within ISO MGI:3701300 (MGI:3714109|PMID:17438133) RGD PMID:17438133 MGI:3714109 NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084
JBrowse link
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta involved_in IEA
ISO
GO_REF:0000107
(PMID:15790729)
Ensembl
RGD
PMID:15790729 GO_REF:0000107 NCBI chr14:77,696,332...77,705,715
Ensembl chr14:77,696,333...77,705,741
JBrowse link
intracellular bile acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IDA
IEA
ISO
PMID:10334992
GO_REF:0000107
(PMID:10334992)
Ensembl
RGD
PMID:10334992 PMID:10334992 GO_REF:0000107, RGD:15090836 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
intracellular estrogen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of
ISO
IEA
(PMID:10428808)
GO_REF:0000107
MGI:2687199 (MGI:2683859|PMID:14676301)
RGD
Ensembl
PMID:10428808 PMID:14676301 GO_REF:0000107 MGI:2683859 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in ISO (PMID:12200431) RGD PMID:12200431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 acts_upstream_of_or_within ISO MGI:1352467 (MGI:2662764|PMID:12756295) RGD PMID:12756295 MGI:2662764 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 acts_upstream_of
involved_in
ISO
IEA
MGI:2182328 (MGI:3761900|PMID:12370428)
GO_REF:0000107
RGD
Ensembl
PMID:12370428 GO_REF:0000107 MGI:3761900 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO
IEA
(PMID:24275493)
GO_REF:0000107
RGD
Ensembl
PMID:24275493 GO_REF:0000107 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:24275493) RGD PMID:24275493 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Esr1 estrogen receptor 1 involved_in ISO
IEA
(PMID:9841876)
GO_REF:0000107
RGD
Ensembl
PMID:9841876 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
MGI:2152217 (MGI:3761900|PMID:12370428)
(PMID:24033289)
GO_REF:0000002
RGD
InterPro
PMID:12370428 PMID:24033289 PMID:9600083 GO_REF:0000002 MGI:3761900, RGD:728646 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IMP RGD PMID:20445128 RGD:4892084 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in ISO
IEA
(PMID:22853951)
GO_REF:0000107
RGD
Ensembl
PMID:22853951 GO_REF:0000107 NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632
JBrowse link
G Phb2 prohibitin 2 acts_upstream_of
involved_in
ISO
IEA
MGI:3574361 (MGI:3695669|PMID:17065319)
GO_REF:0000107
RGD
Ensembl
PMID:17065319 GO_REF:0000107 MGI:3695669 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISO (PMID:21241485) RGD PMID:21241485 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in ISS
ISO
GO_REF:0000024
(PMID:11854298)
UniProt
RGD
PMID:11854298 GO_REF:0000024 NCBI chr18:54,758,891...54,861,103
Ensembl chr18:54,758,902...54,861,194
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:11875103)
UniProt
RGD
PMID:11875103 GO_REF:0000024 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
JBrowse link
G Safb scaffold attachment factor B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3577076 (MGI:3575963|PMID:15798188)
RGD PMID:15798188 PMID:21873635 MGI:3575963, RGD:13792537 NCBI chr 9:1,417,449...1,438,408
Ensembl chr 9:1,417,525...1,438,644
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 acts_upstream_of_or_within ISO (MGI:1342782|PMID:10438527) RGD PMID:10438527 MGI:1342782 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
G Trip4 thyroid hormone receptor interactor 4 involved_in ISO (PMID:25219498) RGD PMID:25219498 NCBI chr 8:66,351,861...66,439,679
Ensembl chr 8:66,353,248...66,439,774
JBrowse link
intracellular steroid hormone receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 involved_in ISO
IEA
(MGI:3530629|PMID:14690606)
GO_REF:0000107
RGD
Ensembl
PMID:14690606 GO_REF:0000107 MGI:3530629 NCBI chr 7:133,834,705...133,849,515
Ensembl chr 7:133,834,707...133,849,422
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in ISO (MGI:3530629|PMID:14690606) RGD PMID:14690606 MGI:3530629 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Esr1 estrogen receptor 1 involved_in IDA
IBA
PMID:21873635
PMID:15705806
RGD
GO_Central
UniProt
PMID:17928626 PMID:21873635 PMID:15705806 RGD:5128669, RGD:13792537, RGD:8553914 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17928626 PMID:21873635 RGD:5128669, RGD:13792537 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:15705806)
Ensembl
RGD
PMID:15705806 PMID:20445128 PMID:21873635 GO_REF:0000107, RGD:4892084, RGD:13792537 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Med1 mediator complex subunit 1 involved_in ISO
ISS
(PMID:11867769)
GO_REF:0000024
RGD
UniProt
PMID:11867769 GO_REF:0000024 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Pgr progesterone receptor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:17600090), (PMID:33727702)
(PMID:17600090), (PMID:19211564), (PMID:33727702)
RGD PMID:17600090 PMID:19211564 PMID:33727702 NCBI chr 3:47,228,980...47,275,403
Ensembl chr 3:47,227,364...47,275,456
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO
IEA
(PMID:30078389)
GO_REF:0000107
RGD
Ensembl
PMID:30078389 GO_REF:0000107 NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
JBrowse link
mineralocorticoid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak2 Janus kinase 2 IMP RGD PMID:15932931 RGD:1641841 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
negative regulation of androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2 DAB adaptor protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16267015)
Ensembl
RGD
PMID:16267015 GO_REF:0000107 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:2152217 (MGI:3761900|PMID:12370428) RGD PMID:12370428 MGI:3761900 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (PMID:16120611) RGD PMID:16120611 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:18640093) RGD PMID:18640093 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:15919722) RGD PMID:15919722 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in ISO (PMID:21454491) RGD PMID:21454491 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:2152423 (MGI:3822220|PMID:18827067) RGD PMID:18827067 MGI:3822220 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO (PMID:20812024) RGD PMID:20812024 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 involved_in ISO (PMID:20812024) RGD PMID:20812024 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21656830) RGD PMID:21656830 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:16964284), (PMID:18487222) RGD PMID:16964284 PMID:18487222 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 involved_in ISO (PMID:11477070) RGD PMID:11477070 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:19277043)
GO_REF:0000107
RGD
Ensembl
PMID:19277043 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:17505061) RGD PMID:17505061 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO
IEA
(PMID:18487222)
GO_REF:0000107
RGD
Ensembl
PMID:18487222 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
(MGI:3588448|PMID:15919722)
UniProt
RGD
PMID:15919722 GO_REF:0000024 MGI:3588448 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
IEA
ISS
(PMID:20812024)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20812024 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
negative regulation of glucocorticoid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5567887|PMID:24378737)
UniProt
RGD
PMID:24378737 GO_REF:0000024 MGI:5567887 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5567887|PMID:24378737)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24378737 GO_REF:0000024 GO_REF:0000107 MGI:5567887 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P97784 (MGI:5302136|PMID:22170608), (MGI:5567887|PMID:24378737)
UniProt
RGD
PMID:22170608 PMID:24378737 GO_REF:0000024 MGI:5302136 MGI:5567887 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA
GO_REF:0000024
UniProtKB:P97784 (MGI:5302136|PMID:22170608)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22170608 GO_REF:0000024 GO_REF:0000107 MGI:5302136 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5567887|PMID:24378737)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24378737 GO_REF:0000024 GO_REF:0000107 MGI:5567887 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:16964284) RGD PMID:16964284 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
negative regulation of intracellular estrogen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
(PMID:17505062)
GO_REF:0000107
RGD
Ensembl
PMID:17505062 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:16778766) RGD PMID:16778766 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO (PMID:16778766) RGD PMID:16778766 NCBI chr 7:52,130,444...52,222,338
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:16778766)
UniProt
RGD
PMID:16778766 GO_REF:0000024 NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182328 (MGI:3761900|PMID:12370428)
Ensembl
RGD
PMID:12370428 GO_REF:0000107 MGI:3761900 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (PMID:16120611) RGD PMID:16120611 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IDA PMID:11043578 BHF-UCL PMID:11043578 RGD:8554127 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Kank2 KN motif and ankyrin repeat domains 2 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:17476305)
Ensembl
RGD
PMID:17476305 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:20,311,676...20,341,107
Ensembl chr 8:20,311,676...20,340,900
JBrowse link
G Lbh LBH regulator of WNT signaling pathway involved_in ISO (MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:5634223 NCBI chr 6:22,569,238...22,593,056
Ensembl chr 6:22,568,834...22,593,079
JBrowse link
G Phb2 prohibitin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1351663|MGI:3574361 (MGI:3695669|PMID:17065319), (MGI:3768604|PMID:17785450)
GO_REF:0000107
RGD
Ensembl
PMID:17065319 PMID:17785450 GO_REF:0000107 MGI:3695669 MGI:3768604 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Strn3 striatin 3 IMP RGD PMID:18434427 RGD:2311258 NCBI chr 6:69,047,776...69,134,102
Ensembl chr 6:69,047,776...69,134,102
JBrowse link
G Tp63 tumor protein p63 involved_in ISO (MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:5634223 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO UniProtKB:Q9P253 (PMID:31015428) RGD PMID:31015428 NCBI chr 8:44,683,768...44,698,572
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes involved_in ISO UniProtKB:Q9H270 (PMID:31015428) RGD PMID:31015428 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964
JBrowse link
G Zfp366 zinc finger protein 366 involved_in ISO
IBA
(PMID:17085477)
PMID:21873635
RGD PMID:17085477 PMID:21873635 RGD:13792537 NCBI chr 2:30,578,552...30,640,546
Ensembl chr 2:30,578,715...30,642,182
JBrowse link
negative regulation of intracellular steroid hormone receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin involved_in ISO (PMID:8107809) RGD PMID:8107809 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Hmga2 high mobility group AT-hook 2 IDA RGD PMID:11390395 RGD:1601592 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in ISO
IEA
(PMID:11875111)
GO_REF:0000107
RGD
Ensembl
PMID:11875111 GO_REF:0000107 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:3616918|PMID:16254014) RGD PMID:16254014 MGI:3616918 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISO
ISS
(PMID:19164550)
GO_REF:0000024
RGD
UniProt
PMID:19164550 GO_REF:0000024 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in ISO (PMID:21187438) RGD PMID:21187438 NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:25865883) RGD PMID:25865883 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in ISS
ISO
GO_REF:0000024
(PMID:17600090)
UniProt
RGD
PMID:17600090 GO_REF:0000024 NCBI chr 1:207,238,230...207,253,035
Ensembl chr 1:207,236,557...207,252,737
JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:3777503|PMID:18342009) RGD PMID:18342009 MGI:3777503 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728)
(MGI:5640951|PMID:16203728)
RGD PMID:16203728 MGI:5640951 NCBI chr 2:34,926,962...35,028,440
Ensembl chr 2:34,928,863...35,027,852
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in IBA
ISO
PMID:21873635
(MGI:5640942|PMID:23991106)
(PMID:23991106)
RGD PMID:23991106 PMID:21873635 MGI:5640942, RGD:13792537 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:3777503|PMID:18342009) RGD PMID:18342009 MGI:3777503 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
negative regulation of peroxisome proliferator activated receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (MGI:5318011|PMID:21047783) RGD PMID:21047783 MGI:5318011 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IMP RGD PMID:25840911 RGD:12904676 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:26330104) RGD PMID:26330104 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5559662|PMID:22675471)
UniProt
RGD
PMID:22675471 GO_REF:0000024 MGI:5559662 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:3843109|PMID:19345188) RGD PMID:19345188 MGI:3843109 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
negative regulation of retinoic acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin involved_in ISO (PMID:8107809) RGD PMID:8107809 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:16778766) RGD PMID:16778766 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO MGI:3039046 (MGI:5466369|PMID:22366455) RGD PMID:22366455 MGI:5466369 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO MGI:5007106 (MGI:5528782|PMID:24005908) RGD PMID:24005908 MGI:5528782 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16179254) RGD PMID:16179254 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:16179254) RGD PMID:16179254 NCBI chr  X:98,567,994...98,574,654
Ensembl chr  X:98,569,415...98,572,096
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3617788 (MGI:3615867|PMID:16428452) RGD PMID:16428452 MGI:3615867 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
JBrowse link
G Zfp536 zinc finger protein 536 acts_upstream_of_or_within ISO (MGI:3849343|PMID:19398580) RGD PMID:19398580 MGI:3849343 NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990
JBrowse link
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISO
ISS
(PMID:19164550)
GO_REF:0000024
RGD
UniProt
PMID:19164550 GO_REF:0000024 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in ISO (PMID:18411269), (PMID:21187438)
(MGI:3836702|PMID:17475874)
RGD PMID:17475874 PMID:18411269 PMID:21187438 MGI:3836702 NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G Gpatch3 G patch domain containing 3 involved_in ISO
IBA
(PMID:28414768)
PMID:21873635
RGD PMID:28414768 PMID:21873635 RGD:13792537 NCBI chr 5:145,798,069...145,809,250
Ensembl chr 5:145,800,111...145,809,250
JBrowse link
G Nlrx1 NLR family member X1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5141085 (MGI:5050761|PMID:21703540)
Ensembl
RGD
PMID:21703540 GO_REF:0000107 MGI:5050761 NCBI chr 8:44,588,476...44,606,678
Ensembl chr 8:44,590,048...44,606,484
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO
IEA
ISS
(PMID:26471729)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26471729 GO_REF:0000024 GO_REF:0000107 NCBI chr10:105,654,395...105,709,958
Ensembl chr10:105,654,812...105,709,913
JBrowse link
G Rnf125 ring finger protein 125 involved_in ISO (PMID:17460044), (PMID:26471729) RGD PMID:17460044 PMID:26471729 NCBI chr18:12,254,066...12,275,719
Ensembl chr18:12,253,852...12,275,983
JBrowse link
G Sec14l1 SEC14-like lipid binding 1 involved_in ISO
IBA
(PMID:23843640)
PMID:21873635
RGD PMID:23843640 PMID:21873635 RGD:13792537 NCBI chr10:102,319,920...102,367,070
Ensembl chr10:102,319,920...102,367,068
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO
ISS
(PMID:26471729)
GO_REF:0000024
RGD
UniProt
PMID:26471729 GO_REF:0000024 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087
JBrowse link
negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tspan6 tetraspanin 6 involved_in ISO (PMID:22908223) RGD PMID:22908223 NCBI chr  X:97,092,394...97,099,659
Ensembl chr  X:97,092,388...97,099,309
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:24671081)
Ensembl
RGD
PMID:24671081 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:20,311,676...20,341,107
Ensembl chr 8:20,311,676...20,340,900
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19502595) RGD PMID:19502595 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf34 ring finger protein 34 involved_in ISO
ISS
(PMID:25012219)
GO_REF:0000024
RGD
UniProt
PMID:25012219 GO_REF:0000024 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586
JBrowse link
nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (MGI:3775161|PMID:18261938) RGD PMID:18261938 MGI:3775161 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of
involved_in
ISO
IEA
(MGI:3775161|PMID:18261938)
GO_REF:0000107
RGD
Ensembl
PMID:18261938 GO_REF:0000107 MGI:3775161 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inava innate immunity activator involved_in ISO (PMID:28436939) RGD PMID:28436939 NCBI chr13:47,666,446...47,687,383
Ensembl chr13:47,666,447...47,686,729
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Lacc1 laccase domain containing 1 involved_in ISO (PMID:31875558) RGD PMID:31875558 NCBI chr15:52,390,267...52,407,630
Ensembl chr15:52,395,183...52,407,545
JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (MGI:3775161|PMID:18261938) RGD PMID:18261938 MGI:3775161 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5562512|PMID:23892723)
(PMID:12527755)
(PMID:23806334)
RGD PMID:12527755 PMID:23806334 PMID:23892723 MGI:5562512 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in ISO (PMID:23806334) RGD PMID:23806334 NCBI chr 2:78,290,437...78,316,633
Ensembl chr 2:78,290,959...78,316,422
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:12527755) RGD PMID:12527755 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23806334)
MGI:2660793 (MGI:2176422|PMID:11894098)
RGD PMID:11894098 PMID:23806334 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of
involved_in
ISO
IEA
(MGI:3775161|PMID:18261938)
GO_REF:0000107
RGD
Ensembl
PMID:18261938 GO_REF:0000107 MGI:3775161 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
peroxisome proliferator activated receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO
ISS
(PMID:22351778)
GO_REF:0000024
RGD
UniProt
PMID:22351778 GO_REF:0000024 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4819891|PMID:20530198)
UniProt
RGD
PMID:20530198 GO_REF:0000024 MGI:4819891 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Fam120b family with sequence similarity 120B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
PR:P37238 (MGI:3758409|PMID:17595322)
RGD PMID:17595322 PMID:21873635 MGI:3758409, RGD:13792537 NCBI chr 1:56,320,015...56,385,064
Ensembl chr 1:56,339,129...56,385,061
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2176946|MGI:3511276 (MGI:3511247|PMID:15150259) RGD PMID:15150259 MGI:3511247 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:17669420) RGD PMID:17669420 NCBI chr  X:58,477,471...58,553,932
Ensembl chr  X:58,486,554...58,553,557
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within
involved_in
ISO PR:Q6RI63 (MGI:3758409|PMID:17595322)
UniProtKB:P01137|UniProtKB:P12643 (PMID:20622039), (PMID:28467929)
RGD PMID:17595322 PMID:20622039 PMID:28467929 MGI:3758409 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:10195690) RGD PMID:10195690 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
positive regulation of glucocorticoid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within IDA PMID:23878391 MGI PMID:23878391 RGD:10047172 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Lmo3 LIM domain only 3 involved_in ISO (PMID:23823477) RGD PMID:23823477 NCBI chr 4:171,234,686...171,297,677
Ensembl chr 4:171,234,696...171,292,222
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IMP RGD PMID:17481888 RGD:5688226 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IDA RGD PMID:22001115 RGD:5686284 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within IGI PMID:23878391 MGI PMID:23878391 RGD:10047172 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit IMP RGD PMID:8943293 RGD:8694070 NCBI chr 1:77,690,203...77,714,507
Ensembl chr 1:77,690,208...77,714,456
JBrowse link
positive regulation of intracellular estrogen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687199 (MGI:2683859|PMID:14676301)
Ensembl
RGD
PMID:14676301 GO_REF:0000107 MGI:2683859 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Foxa1 forkhead box A1 involved_in ISO
IEA
(PMID:16087863)
GO_REF:0000107
RGD
Ensembl
PMID:16087863 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (MGI:1926755|PMID:11089565) RGD PMID:11089565 MGI:1926755 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (PMID:16603732) RGD PMID:16603732 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:4443002 (MGI:4442276|PMID:20351249) RGD PMID:20351249 MGI:4442276 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IDA RGD PMID:11713241 RGD:727330 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IBA
ISO
PMID:21873635
(PMID:19039327)
RGD PMID:19039327 PMID:21873635 RGD:13792537 NCBI chr 1:181,622,708...181,624,996 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
ISS
(PMID:16278681)
GO_REF:0000024
RGD
UniProt
PMID:16278681 GO_REF:0000024 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IMP RGD PMID:23493398 RGD:10413906 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Skp2 S-phase kinase associated protein 2 acts_upstream_of_or_within ISO MGI:102520 (MGI:3768604|PMID:17785450) RGD PMID:17785450 MGI:3768604 NCBI chr 2:58,161,226...58,189,293
Ensembl chr 2:58,161,229...58,189,338
JBrowse link
G Srarp steroid receptor associated and regulated protein involved_in ISO (PMID:27125460) RGD PMID:27125460 NCBI chr 5:153,740,973...153,745,084
Ensembl chr 5:153,740,975...153,744,998
JBrowse link
G Wbp2 WW domain binding protein 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16772533)
UniProt
Ensembl
RGD
PMID:16772533 GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:16772533) RGD PMID:16772533 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
positive regulation of intracellular steroid hormone receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa3 nuclear receptor coactivator 3 IMP glucocorticoid receptor signaling in astrocytes RGD PMID:16179382 RGD:1642052 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IDA glucocorticoid receptor, independent of sumoylation activity or presence of a GME RGD PMID:11812797 RGD:2301354 NCBI chr10:14,277,749...14,294,681
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443
JBrowse link
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) RGD PMID:22328336 NCBI chr14:17,723,239...17,862,625
Ensembl chr14:17,721,932...17,862,617
JBrowse link
G Ddx60 DEXD/H-box helicase 60 involved_in ISO (PMID:21791617) RGD PMID:21791617 NCBI chr16:28,077,000...28,197,903
Ensembl chr16:28,076,999...28,179,526
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in ISO (MGI:4421606|PMID:20080593) RGD PMID:20080593 MGI:4421606 NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like involved_in ISO (PMID:20368735) RGD PMID:20368735 NCBI chr 1:159,151,417...159,155,192
Ensembl chr 1:159,151,432...159,155,192
JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6278628|PMID:21277849), (MGI:6450424|PMID:19570976)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19570976 PMID:21277849 GO_REF:0000024 GO_REF:0000107 MGI:6278628 MGI:6450424 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
G Slc46a2 solute carrier family 46, member 2 involved_in ISO (PMID:28539433) RGD PMID:28539433 NCBI chr 5:74,800,226...74,808,128
Ensembl chr 5:74,800,226...74,808,128
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3775161|PMID:18261938)
Ensembl
RGD
PMID:18261938 GO_REF:0000107 MGI:3775161 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO UniProtKB:Q9HC29 (PMID:24790089) RGD PMID:24790089
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO UniProtKB:Q9HC29 (PMID:24790089) RGD PMID:24790089 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (MGI:5562512|PMID:23892723) RGD PMID:23892723 MGI:5562512 NCBI chr 1:202,230,034...202,242,900
Ensembl chr 1:202,232,228...202,242,857
JBrowse link
G Slc15a3 solute carrier family 15 member 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5571205|PMID:24695226)
UniProt
RGD
PMID:24695226 GO_REF:0000024 MGI:5571205 NCBI chr 1:207,492,365...207,507,158
Ensembl chr 1:207,492,365...207,507,157
JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5571205|PMID:24695226)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24695226 GO_REF:0000024 GO_REF:0000107 MGI:5571205 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3775161|PMID:18261938)
Ensembl
RGD
PMID:18261938 GO_REF:0000107 MGI:3775161 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
positive regulation of peroxisome proliferator activated receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IEA
ISO
GO_REF:0000107
(MGI:3784332|PMID:10965849)
Ensembl
RGD
PMID:10965849 GO_REF:0000107 MGI:3784332 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 involved_in ISO (PMID:21047783) RGD PMID:21047783 NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
UniProtKB:P01137|UniProtKB:P37231 (PMID:28467929)
GO_REF:0000107
RGD
Ensembl
PMID:28467929 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (PMID:15051727) RGD PMID:15051727 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Fabp5 fatty acid binding protein 5 involved_in ISO (MGI:6158690|PMID:17512406) RGD PMID:17512406 MGI:6158690 NCBI chr 2:91,765,056...91,768,716
Ensembl chr 2:91,765,056...91,853,773
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (MGI:6148392|PMID:24953653) RGD PMID:24953653 MGI:6148392 NCBI chr10:54,637,360...54,640,542
Ensembl chr10:54,637,455...54,640,650
JBrowse link
G Lep leptin IDA RGD PMID:20738325 RGD:8693628 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lmo3 LIM domain only 3 involved_in ISO (PMID:23823477) RGD PMID:23823477 NCBI chr 4:171,234,686...171,297,677
Ensembl chr 4:171,234,696...171,292,222
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISS
ISO
GO_REF:0000024
(PMID:11551955)
UniProt
RGD
PMID:11551955 GO_REF:0000024 NCBI chr 3:155,928,564...155,964,228
Ensembl chr 3:155,916,412...155,965,451
JBrowse link
G Stard10 StAR-related lipid transfer domain containing 10 acts_upstream_of_or_within ISO (MGI:5499673|PMID:23200860) RGD PMID:23200860 MGI:5499673 NCBI chr 1:155,722,637...155,748,007
Ensembl chr 1:155,718,389...155,747,094
JBrowse link
positive regulation of retinoic acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (MGI:3688807|PMID:16606617) RGD PMID:16606617 MGI:3688807 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
JBrowse link
G Ctbp2 C-terminal binding protein 2 acts_upstream_of_or_within ISO (MGI:5538466|PMID:23775127)
(PMID:23775127)
RGD PMID:23775127 MGI:5538466 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Klf2 Kruppel-like factor 2 involved_in ISO (PMID:26416422) RGD PMID:26416422 NCBI chr16:17,521,773...17,523,723
Ensembl chr16:17,514,552...17,523,944
JBrowse link
G Nr2c1 nuclear receptor subfamily 2, group C, member 1 involved_in ISO (MGI:5285179|PMID:16130175) RGD PMID:16130175 MGI:5285179 NCBI chr 7:28,715,347...28,768,624
Ensembl chr 7:28,715,562...28,767,160
JBrowse link
G Trim16 tripartite motif-containing 16 involved_in ISO (PMID:16636064) RGD PMID:16636064 NCBI chr10:47,485,982...47,509,010
Ensembl chr10:47,486,297...47,551,907
JBrowse link
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) RGD PMID:22328336 NCBI chr14:17,723,239...17,862,625
Ensembl chr14:17,721,932...17,862,617
JBrowse link
G Ddx60 DEXD/H-box helicase 60 involved_in ISO (PMID:21791617) RGD PMID:21791617 NCBI chr16:28,077,000...28,197,903
Ensembl chr16:28,076,999...28,179,526
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in ISO (MGI:4421606|PMID:20080593) RGD PMID:20080593 MGI:4421606 NCBI chr10:85,620,352...85,631,776
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like involved_in ISO (PMID:20368735) RGD PMID:20368735 NCBI chr 1:159,151,417...159,155,192
Ensembl chr 1:159,151,432...159,155,192
JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in ISO (PMID:25925578) RGD PMID:25925578 NCBI chr12:41,682,900...41,695,641
Ensembl chr12:41,682,900...41,695,641
JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO (PMID:25340845) RGD PMID:25340845 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO (PMID:25340845) RGD PMID:25340845 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr20:1,700,905...1,710,249
Ensembl chr20:1,700,905...1,710,249
JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO
IEA
(PMID:24399297)
GO_REF:0000107
RGD
Ensembl
PMID:24399297 GO_REF:0000107 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435) RGD PMID:21102435 NCBI chr 4:67,012,151...67,062,406
Ensembl chr 4:67,012,185...67,062,428
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO
IBA
(PMID:30193849)
PMID:21873635
RGD PMID:30193849 PMID:21873635 RGD:13792537 NCBI chr 3:140,872,460...140,875,851
Ensembl chr 3:140,872,460...140,882,408
JBrowse link
positive regulation of thyroid hormone mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha involved_in ISO (PMID:1310350), (PMID:26289479)
(MGI:6827315|PMID:8910441)
RGD PMID:1310350 PMID:8910441 PMID:26289479 MGI:6827315 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Thra thyroid hormone receptor alpha involved_in ISO (PMID:1310350)
(MGI:6827315|PMID:8910441)
RGD PMID:1310350 PMID:8910441 MGI:6827315 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thrb thyroid hormone receptor beta involved_in ISO
IEA
(PMID:26289479)
GO_REF:0000107
RGD
Ensembl
PMID:26289479 GO_REF:0000107 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
(PMID:16549446)
GO_REF:0000107
RGD
Ensembl
PMID:16549446 GO_REF:0000107 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) RGD PMID:15890672 NCBI chr12:45,184,060...45,220,102
Ensembl chr12:45,183,085...45,221,651
JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:20171278) RGD PMID:20171278 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) RGD PMID:9632709 PMID:11514567 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Vdr vitamin D receptor involved_in ISO
IEA
(PMID:20171278)
GO_REF:0000107
RGD
Ensembl
PMID:20171278 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link
progesterone receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf9 Kruppel-like factor 9 acts_upstream_of_or_within ISO (MGI:3050178|PMID:15117941) RGD PMID:15117941 MGI:3050178 NCBI chr 1:220,700,108...220,725,029
Ensembl chr 1:220,700,108...220,725,037
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:8649367) RGD PMID:8649367 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Pgr progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3603974|PMID:16176985)
Ensembl
RGD
PMID:16176985 GO_REF:0000107 MGI:3603974 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:16964284) RGD PMID:16964284 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IBA
IMP
PMID:21873635
PMID:21440892
GO_Central
BHF-UCL
PMID:21873635 PMID:21440892 RGD:13792537, RGD:7248703 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Trerf1 transcriptional regulating factor 1 involved_in ISO (PMID:17015480) RGD PMID:17015480 NCBI chr 9:13,631,619...13,858,326
Ensembl chr 9:13,634,126...13,857,029
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:16772533) RGD PMID:16772533 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:12011095) RGD PMID:12011095 NCBI chr 7:69,116,758...69,224,490
Ensembl chr 7:69,116,761...69,224,903
JBrowse link
G Wbp2 WW domain binding protein 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16772533)
UniProt
Ensembl
RGD
PMID:16772533 GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:16772533) RGD PMID:16772533 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
regulation of androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:18829551) RGD PMID:18829551 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:18487222) RGD PMID:18487222 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Kdm5d lysine demethylase 5D involved_in ISO (PMID:27185910) RGD PMID:27185910 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS
(PMID:11477070)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:11477070 GO_REF:0000024 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 acts_upstream_of_or_within IDA PMID:9920921 MGI PMID:9920921 RGD:70792 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in ISO (PMID:17587566) RGD PMID:17587566 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643
JBrowse link
G Rnf14 ring finger protein 14 involved_in ISO (PMID:19345326) RGD PMID:19345326 NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685
JBrowse link
G Rnf6 ring finger protein 6 involved_in ISO (PMID:19345326) RGD PMID:19345326 NCBI chr12:8,816,777...8,826,870
Ensembl chr12:8,816,833...8,826,847
JBrowse link
G Safb2 scaffold attachment factor B2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5695073 (MGI:5693455|PMID:26092125)
RGD PMID:26092125 PMID:21873635 MGI:5693455, RGD:13792537 NCBI chr 9:1,395,852...1,417,010
Ensembl chr 9:1,387,107...1,417,038
JBrowse link
G Trim68 tripartite motif containing 68 involved_in ISO (PMID:18451177) RGD PMID:18451177 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477
JBrowse link
regulation of intracellular estrogen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in ISO
ISS
(MGI:4887320|PMID:19843527)
GO_REF:0000024
RGD
UniProt
PMID:19843527 GO_REF:0000024 MGI:4887320 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:25219498) RGD PMID:25219498 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO
ISS
(PMID:19423554)
GO_REF:0000024
RGD
UniProt
PMID:19423554 GO_REF:0000024 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (MGI:3817843|PMID:18676690), (MGI:3834509|PMID:18063689) RGD PMID:18063689 PMID:18676690 MGI:3817843 MGI:3834509 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in ISO (PMID:28068668) RGD PMID:28068668 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857247 (MGI:3589531|PMID:16007215) RGD PMID:16007215 MGI:3589531 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Uba5 ubiquitin-like modifier activating enzyme 5 involved_in ISO
ISS
(PMID:25219498)
GO_REF:0000024
RGD
UniProt
PMID:25219498 GO_REF:0000024 NCBI chr 8:104,665,241...104,680,850
Ensembl chr 8:104,665,046...104,680,894
JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
ISS
(PMID:25219498)
GO_REF:0000024
RGD
UniProt
PMID:25219498 GO_REF:0000024 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISO
ISS
(PMID:25219498)
GO_REF:0000024
RGD
UniProt
PMID:25219498 GO_REF:0000024 NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089
Ensembl chr 2:137,966,678...137,978,089
JBrowse link
G Ufsp2 UFM1-specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:25219498)
UniProt
RGD
PMID:25219498 GO_REF:0000024 NCBI chr16:46,272,016...46,291,080
Ensembl chr16:46,272,016...46,291,059
JBrowse link
regulation of intracellular steroid hormone receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO MGI:1856425 (MGI:1340790|PMID:10459853) RGD PMID:10459853 MGI:1340790 NCBI chr 4:84,498,159...84,532,847
Ensembl chr 4:84,500,212...84,532,776
JBrowse link
regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (MGI:5562512|PMID:23892723) RGD PMID:23892723 MGI:5562512 NCBI chr 1:202,230,034...202,242,900
Ensembl chr 1:202,232,228...202,242,857
JBrowse link
regulation of nucleotide-binding oligomerization domain containing signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a2 solute carrier family 15 member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6192142|PMID:29784761)
UniProt
RGD
PMID:29784761 GO_REF:0000024 MGI:6192142 NCBI chr11:64,014,182...64,043,228
Ensembl chr11:64,014,182...64,043,225
JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6192142|PMID:29784761)
UniProt
RGD
PMID:29784761 GO_REF:0000024 MGI:6192142 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
regulation of peroxisome proliferator activated receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
ISO
GO_REF:0000024
(MGI:5508298|PMID:10432118)
UniProt
RGD
PMID:10432118 GO_REF:0000024 MGI:5508298 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3045940|PMID:15175761) RGD PMID:15175761 MGI:3045940 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
regulation of retinoic acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO MGI:3764691 (MGI:5547469|PMID:23991089) RGD PMID:23991089 MGI:5547469 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:14985122) RGD PMID:14985122 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) RGD PMID:27824081 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
regulation of thyroid hormone mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphb5 glycoprotein hormone subunit beta 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3615364 (MGI:4453244|PMID:20223276)
RGD PMID:20223276 PMID:21873635 MGI:4453244, RGD:13792537 NCBI chr 6:94,131,021...94,133,570
Ensembl chr 6:94,131,021...94,133,570
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 acts_upstream_of_or_within ISO MGI:1349717 (MGI:5585573|PMID:24550004) RGD PMID:24550004 MGI:5585573 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:1276523 (MGI:5585573|PMID:24550004) RGD PMID:24550004 MGI:5585573 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Prcp prolylcarboxypeptidase acts_upstream_of_or_within ISO MGI:4123993 (MGI:5313762|PMID:22202165) RGD PMID:22202165 MGI:5313762 NCBI chr 1:146,931,487...146,983,891
Ensembl chr 1:146,930,561...146,984,530
JBrowse link
G Thra thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679056 (MGI:2677074|PMID:12869545)
Ensembl
RGD
PMID:12869545 GO_REF:0000107 MGI:2677074 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir708 microRNA 708 involved_in ISO (PMID:31599428) RGD PMID:31599428 NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (MGI:3655015|PMID:16324150) RGD PMID:16324150 MGI:3655015 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:14985122) RGD PMID:14985122 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Trim24 tripartite motif-containing 24 acts_upstream_of_or_within ISO MGI:3772051 (MGI:3776949|PMID:18287084) RGD PMID:18287084 MGI:3776949 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
retinoic acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO
ISS
(PMID:22351778)
GO_REF:0000024
RGD
UniProt
PMID:22351778 GO_REF:0000024 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (MGI:3574230|PMID:15739227), (MGI:3663954|PMID:16806149), (MGI:3703483|PMID:17067568) RGD PMID:15739227 PMID:16806149 PMID:17067568 MGI:3574230 MGI:3663954 MGI:3703483 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Crem cAMP responsive element modulator IEP RGD PMID:15725648 RGD:1582466 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:5510713 (MGI:6102264|PMID:25565927) RGD PMID:25565927 MGI:6102264 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO MGI:2679699 (MGI:3703483|PMID:17067568)
(MGI:894533|PMID:9250660)
RGD PMID:9250660 PMID:17067568 MGI:3703483 MGI:894533 NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
ISO (MGI:3809313|PMID:18816858)
MGI:3039046 (MGI:5466369|PMID:22366455)
(MGI:3037623|PMID:15030763), (MGI:3619821|PMID:16554478)
RGD PMID:15030763 PMID:16554478 PMID:18816858 PMID:22366455 MGI:3037623 MGI:3619821 MGI:3809313 MGI:5466369 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Esrrg estrogen-related receptor gamma involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:99,167,656...99,788,016
Ensembl chr13:99,564,669...99,783,397
JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:15602748 RGD:1582142 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 IDA RGD PMID:7971966 RGD:61674 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:2429949 (MGI:1197798|PMID:9488655) RGD PMID:9488655 MGI:1197798 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO
ISS
(PMID:16239304)
(MGI:5447618|PMID:16239304)
GO_REF:0000024
RGD
UniProt
PMID:16239304 GO_REF:0000024 MGI:5447618 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO
GO_REF:0000024
(MGI:1859633|PMID:11318877)
HGNC
RGD
PMID:11318877 GO_REF:0000024 MGI:1859633 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Rara retinoic acid receptor, alpha involved_in IBA
ISO
PMID:21873635
(PMID:17538076), (PMID:19917671), (PMID:2825025)
RGD PMID:2825025 PMID:17538076 PMID:19917671 PMID:21873635 RGD:13792537 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rarb retinoic acid receptor, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
MGI:1931079 (MGI:60925|PMID:8388780)
PMID:21873635
(PMID:17943189)
RGD PMID:8388780 PMID:17943189 PMID:11072095 PMID:21873635 MGI:60925, RGD:1300463, RGD:13792537 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Rxra retinoid X receptor alpha involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:1309942), (PMID:17538076)
(MGI:50850|PMID:1312497), (MGI:5538466|PMID:23775127)
RGD PMID:1309942 PMID:1312497 PMID:17538076 PMID:23775127 PMID:21873635 MGI:50850 MGI:5538466, RGD:13792537 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:50850|PMID:1312497)
RGD PMID:1312497 PMID:21873635 MGI:50850, RGD:13792537 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:50850|PMID:1312497)
RGD PMID:1312497 PMID:21873635 MGI:50850, RGD:13792537 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:19934264) RGD PMID:19934264 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3809313|PMID:18816858)
UniProt
RGD
PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1100864|MGI:1857891 (MGI:3578715|PMID:15889094) RGD PMID:15889094 MGI:3578715 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clpb caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr 1:156,028,740...156,158,183
Ensembl chr 1:156,028,930...156,168,788
JBrowse link
G Ddx58 DEXD/H-box helicase 58 involved_in ISO (PMID:19211564), (PMID:28469175) RGD PMID:19211564 PMID:28469175 NCBI chr 5:55,321,229...55,369,947
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor acts_upstream_of_or_within ISO MGI:2442858|MGI:2444773 (MGI:5432265|PMID:22745163) RGD PMID:22745163 MGI:5432265 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276
JBrowse link
G Mavs mitochondrial antiviral signaling protein acts_upstream_of_or_within ISO MGI:1914320 (MGI:5432265|PMID:22745163) RGD PMID:22745163 MGI:5432265 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO
IEA
(PMID:30078389)
GO_REF:0000107
RGD
Ensembl
PMID:30078389 GO_REF:0000107 NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Phb2 prohibitin 2 involved_in ISO
IEA
(PMID:31522117)
GO_REF:0000107
RGD
Ensembl
PMID:31522117 GO_REF:0000107 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO
ISS
(PMID:23950712), (PMID:28469175), (PMID:31006531)
GO_REF:0000024
UniProtKB:Q8IUD6 (MGI:6152590|PMID:21147464), (MGI:6377978|PMID:28469175)
RGD
UniProt
PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 GO_REF:0000024 MGI:6152590 MGI:6377978 NCBI chr10:65,170,560...65,189,791
Ensembl chr10:65,170,560...65,262,804
JBrowse link
G Trim25 tripartite motif-containing 25 NOT|involved_in ISO (PMID:31006531) RGD PMID:31006531 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
thyroid hormone mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16314496)
UniProt
RGD
PMID:16314496 GO_REF:0000024 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Thra thyroid hormone receptor alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thrb thyroid hormone receptor beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) RGD PMID:22720752 NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
JBrowse link
G Vdr vitamin D receptor involved_in ISO
IEA
(PMID:16549446), (PMID:28698609)
GO_REF:0000107
RGD
Ensembl
PMID:16549446 PMID:28698609 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    signaling 7370
      signal transduction 6808
        intracellular receptor signaling pathway 260
          blue light signaling pathway 0
          cytoplasmic pattern recognition receptor signaling pathway + 54
          intracellular bile acid receptor signaling pathway 1
          intracellular endosomal pattern recognition receptor signaling pathway 0
          intracellular steroid hormone receptor signaling pathway + 114
          juvenile hormone mediated signaling pathway 0
          nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway + 20
          peroxisome proliferator activated receptor signaling pathway + 24
          retinoic acid receptor signaling pathway + 33
          thyroid hormone mediated signaling pathway + 8
          vitamin D receptor signaling pathway + 10
Path 2
Term Annotations click to browse term
  biological_process 18734
    biological regulation 13314
      regulation of biological process 12594
        regulation of cellular process 11909
          signal transduction 6808
            intracellular receptor signaling pathway 260
              blue light signaling pathway 0
              cytoplasmic pattern recognition receptor signaling pathway + 54
              intracellular bile acid receptor signaling pathway 1
              intracellular endosomal pattern recognition receptor signaling pathway 0
              intracellular steroid hormone receptor signaling pathway + 114
              juvenile hormone mediated signaling pathway 0
              nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway + 20
              peroxisome proliferator activated receptor signaling pathway + 24
              retinoic acid receptor signaling pathway + 33
              thyroid hormone mediated signaling pathway + 8
              vitamin D receptor signaling pathway + 10
paths to the root