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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle contractile fiber
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Accession:GO:0030485 term browser browse the term
Definition:The contractile fiber of smooth muscle cells.



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smooth muscle contractile fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:51,883,709...51,886,735
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Acta2 actin alpha 2, smooth muscle located_in IEA
ISO
GO_REF:0000107
(MGI:3794929|PMID:18332105)
Ensembl
RGD
PMID:18332105 GO_REF:0000107 MGI:3794929 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Actg2 actin gamma 2, smooth muscle located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 located_in ISO
IEA
(MGI:4454534|PMID:19741271)
GO_REF:0000107
RGD
Ensembl
PMID:19741271 GO_REF:0000107 MGI:4454534 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Myh11 myosin heavy chain 11 located_in ISO (MGI:3576700|PMID:11715025) RGD PMID:11715025 MGI:3576700 NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
JBrowse link
G Npnt nephronectin located_in ISO (MGI:4947862|PMID:21335239) RGD PMID:21335239 MGI:4947862 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 located_in ISO (MGI:3794929|PMID:18332105) RGD PMID:18332105 MGI:3794929 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
smooth muscle dense body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20111
    cellular anatomical entity 19957
      cytoplasm 11418
        contractile fiber 257
          smooth muscle contractile fiber 9
            smooth muscle dense body 1
Path 2
Term Annotations click to browse term
  cellular_component 20111
    cellular anatomical entity 19957
      organelle 13362
        non-membrane-bounded organelle 5117
          intracellular non-membrane-bounded organelle 5116
            contractile fiber 257
              smooth muscle contractile fiber 9
                smooth muscle dense body 1
paths to the root