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ONTOLOGY REPORT - ANNOTATIONS


Term:sleep
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Accession:GO:0030431 term browser browse the term
Definition:Any process in which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain.
Synonyms:related_synonym: diapause;   dormancy;   lethargus
 xref: Wikipedia:Sleep


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sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1i calcium channel, voltage-dependent, alpha 1I subunit IMP (MGI:5286762|PMID:21808016) MGI PMID:21808016 MGI:5286762 NCBI chr15:80,287,238...80,398,292
Ensembl chr15:80,287,238...80,398,279
JBrowse link
G Dlat dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) ISO RGD PMID:16923172 RGD:2313667 NCBI chr 9:50,634,633...50,659,780
Ensembl chr 9:50,634,633...50,659,780
JBrowse link
G Fos FBJ osteosarcoma oncogene ISO RGD PMID:17274184 RGD:2293765 NCBI chr12:85,473,890...85,477,274
Ensembl chr12:85,473,890...85,477,273
JBrowse link
G Fosl2 fos-like antigen 2 ISO RGD PMID:16690212 RGD:2293769 NCBI chr 5:32,136,472...32,157,840
Ensembl chr 5:32,135,801...32,157,842
JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) IMP (MGI:3629276|PMID:12754515) MGI PMID:12754515 MGI:3629276 NCBI chr16:9,567,901...9,996,083
Ensembl chr16:9,567,898...9,995,560
JBrowse link
G Hcrt hypocretin IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:100,761,693...100,762,931
Ensembl chr11:100,761,069...100,762,931
JBrowse link
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:74,640,874...74,706,859
Ensembl chr14:74,640,840...74,709,494
JBrowse link
G Il18 interleukin 18 ISS
ISO
(MGI:3688052|PMID:11506998) UniProt
MGI
PMID:11506998 GO_REF:0000096 MGI:3688052 MGI:4417868 NCBI chr 9:50,554,700...50,581,841
Ensembl chr 9:50,554,827...50,581,840
JBrowse link
G Oxt oxytocin ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:130,574,519...130,577,054
Ensembl chr 2:130,576,173...130,577,054
JBrowse link
G Oxtr oxytocin receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:112,473,683...112,491,035
Ensembl chr 6:112,473,683...112,489,943
JBrowse link
G Ptgdr prostaglandin D receptor IMP (MGI:3761771|PMID:11562489) MGI PMID:11562489 MGI:3761771 NCBI chr14:44,851,235...44,859,375
Ensembl chr14:44,851,235...44,859,375
JBrowse link
G Slc29a1 solute carrier family 29 (nucleoside transporters), member 1 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr17:45,585,200...45,599,618
Ensembl chr17:45,585,200...45,599,606
JBrowse link
G Snap25 synaptosomal-associated protein 25 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:136,713,439...136,782,428
Ensembl chr 2:136,713,453...136,782,428
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB (POZ) domain containing 9 IMP (MGI:5436392|PMID:22678064) MGI PMID:22678064 MGI:5436392 NCBI chr17:30,215,524...30,582,621
Ensembl chr17:30,215,524...30,576,488
JBrowse link
G Ghrh growth hormone releasing hormone ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:157,329,496...157,348,725
Ensembl chr 2:157,329,497...157,347,506
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO RGD PMID:17027151 RGD:2306498 NCBI chr 2:148,871,722...148,875,512
Ensembl chr 2:148,871,722...148,875,692
JBrowse link
G Gabrb3 gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 IMP (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chr 7:57,590,518...57,828,802
Ensembl chr 7:57,419,692...57,828,802
JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha ISO RGD PMID:20844122 RGD:13515123 NCBI chr 8:83,972,978...83,996,444
Ensembl chr 8:83,972,993...83,996,443
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr13:69,573,449...69,611,485
Ensembl chr13:69,573,449...69,611,442
JBrowse link
G Star steroidogenic acute regulatory protein ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr 8:25,808,474...25,815,982
Ensembl chr 8:25,806,555...25,815,982
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Adora1 adenosine A1 receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:134,199,215...134,235,457
Ensembl chr 1:134,199,223...134,235,431
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:113,716,119...113,719,911
Ensembl chr 6:113,716,119...113,719,880
JBrowse link
G Htr7 5-hydroxytryptamine (serotonin) receptor 7 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:35,958,415...36,058,133
Ensembl chr19:35,958,734...36,057,507
JBrowse link
G Ptger4 prostaglandin E receptor 4 (subtype EP4) ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:5,233,399...5,244,187
Ensembl chr15:5,206,661...5,244,187
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:134,199,215...134,235,457
Ensembl chr 1:134,199,223...134,235,431
JBrowse link
G Drd1 dopamine receptor D1 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr13:54,051,183...54,055,658
Ensembl chr13:54,051,183...54,055,705
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:49,340,360...49,408,177
Ensembl chr 9:49,340,627...49,408,177
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:90,460,870...90,476,602
Ensembl chr 5:90,460,897...90,476,602
JBrowse link
G Casp1 caspase 1 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:5,298,517...5,307,281
Ensembl chr 9:5,298,508...5,307,290
JBrowse link
G Ghrh growth hormone releasing hormone ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:157,329,496...157,348,725
Ensembl chr 2:157,329,497...157,347,506
JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:55,376,295...55,388,530
Ensembl chr 6:55,376,295...55,388,530
JBrowse link
G Ghrl ghrelin ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:113,716,119...113,719,911
Ensembl chr 6:113,716,119...113,719,880
JBrowse link
G Mtnr1b melatonin receptor 1B ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:15,862,614...15,874,556
Ensembl chr 9:15,824,528...15,874,556
JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:82,538,383...82,548,989
Ensembl chr 3:82,538,383...82,548,084
JBrowse link
G Ptger3 prostaglandin E receptor 3 (subtype EP3) ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:157,566,821...157,644,758
Ensembl chr 3:157,566,892...157,645,888
JBrowse link
G Ptger4 prostaglandin E receptor 4 (subtype EP4) ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:5,233,399...5,244,187
Ensembl chr15:5,206,661...5,244,187
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr 2:157,329,496...157,348,725
Ensembl chr 2:157,329,497...157,347,506
JBrowse link
G Pmch pro-melanin-concentrating hormone ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:88,091,072...88,092,374
Ensembl chr10:88,091,072...88,092,375
JBrowse link
G Uts2 urotensin 2 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:150,997,097...151,001,810
Ensembl chr 4:150,997,097...151,001,810
JBrowse link
G Uts2r urotensin 2 receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:121,160,271...121,161,973
Ensembl chr11:121,160,271...121,161,973
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:75,316,877...75,334,792
Ensembl chr10:75,316,877...75,334,784
JBrowse link
G Opn4 opsin 4 (melanopsin) IMP (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr14:34,590,618...34,600,142
Ensembl chr14:34,590,618...34,600,142
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) IMP (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 3:89,753,448...89,764,632
Ensembl chr 3:89,746,195...89,764,632
JBrowse link
G Il6 interleukin 6 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:30,013,114...30,019,975
Ensembl chr 5:30,013,114...30,019,981
JBrowse link
G Kcna2 potassium voltage-gated channel, shaker-related subfamily, member 2 IMP (MGI:3770734|PMID:17925011) UniProt PMID:17925011 MGI:3770734 NCBI chr 3:107,090,883...107,115,005
Ensembl chr 3:107,101,146...107,115,005
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) IMP (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 3:89,753,448...89,764,632
Ensembl chr 3:89,746,195...89,764,632
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Adrb1 adrenergic receptor, beta 1 IMP
ISO
(MGI:6368107|PMID:25083013) UniProt
MGI
PMID:25083013 GO_REF:0000096 MGI:4834177 MGI:6368107 NCBI chr19:56,722,117...56,725,150
Ensembl chr19:56,722,199...56,733,113
JBrowse link
G Cort cortistatin ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:149,125,034...149,126,763
Ensembl chr 4:149,125,034...149,126,763
JBrowse link
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:54,247,270...54,249,899
Ensembl chr11:54,247,271...54,249,667
JBrowse link
G Drd3 dopamine receptor D3 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:43,754,015...43,825,982
Ensembl chr16:43,754,026...43,822,932
JBrowse link
G Nmu neuromedin U ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:76,333,495...76,363,777
Ensembl chr 5:76,333,495...76,363,788
JBrowse link
G Per3 period circadian clock 3 IMP
ISO
(MGI:5300112|PMID:21957163) UniProt
MGI
PMID:21957163 GO_REF:0000096 MGI:4834177 MGI:5300112 NCBI chr 4:150,997,018...151,044,707
Ensembl chr 4:151,003,652...151,044,665
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 7:18,884,690...18,890,438
Ensembl chr 7:18,871,331...18,890,459
JBrowse link
G Ptgds prostaglandin D2 synthase (brain) IDA (MGI:3687807|PMID:10781097) UniProt PMID:10781097 MGI:3687807 NCBI chr 2:25,466,709...25,470,110
Ensembl chr 2:25,466,709...25,470,046
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23347
    multicellular organismal process 8895
      sleep 49
        circadian sleep/wake cycle, sleep + 36
        estivation 0
        hibernation + 0
paths to the root