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ONTOLOGY REPORT - ANNOTATIONS


Term:sleep
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Accession:GO:0030431 term browser browse the term
Definition:Any process in which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain.
Synonyms:related_synonym: diapause;   dormancy;   lethargus
 xref: Wikipedia:Sleep


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sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1I calcium voltage-gated channel subunit alpha1 I IEA Ensembl GO_REF:0000107 NCBI chr10:25,381,446...25,493,680
Ensembl chr10:25,380,943...25,482,852
JBrowse link
G DLAT dihydrolipoamide S-acetyltransferase ISO RGD PMID:16923172 RGD:2313667 NCBI chr 5:21,062,833...21,094,235
Ensembl chr 5:21,064,026...21,094,153
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:17274184 RGD:2293765 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:16690212 RGD:2293769 NCBI chr17:22,340,469...22,364,994
Ensembl chr17:22,341,322...22,361,772
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A IEA Ensembl GO_REF:0000107 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960
JBrowse link
G HCRT hypocretin neuropeptide precursor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:20,729,616...20,732,074
Ensembl chr 9:20,730,779...20,732,028
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO RGD PMID:17059817 RGD:1624384 NCBI chr22:4,453,715...4,510,934
Ensembl chr22:4,453,715...4,511,037
JBrowse link
G IL18 interleukin 18 ISO PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 5:20,972,742...20,995,327
Ensembl chr 5:20,972,871...20,995,348
JBrowse link
G OXT oxytocin/neurophysin I prepropeptide ISO RGD PMID:12832103 RGD:2304184 NCBI chr24:18,193,381...18,194,232
Ensembl chr24:18,193,339...18,194,170
JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:12832103 RGD:2304184 NCBI chr20:9,358,797...9,382,308
Ensembl chr20:9,358,916...9,378,343
JBrowse link
G PTGDR prostaglandin D2 receptor ISO (MGI:3761771|PMID:11562489) MGI PMID:11562489 MGI:3761771 NCBI chr 8:28,480,446...28,491,331
Ensembl chr 8:28,480,478...28,488,855
JBrowse link
G SLC29A1 solute carrier family 29 member 1 (Augustine blood group) ISO RGD PMID:14633241 RGD:2316943 NCBI chr12:12,632,233...12,644,669
Ensembl chr12:12,634,194...12,644,667
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:16273548 RGD:1581074 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IEA Ensembl GO_REF:0000107 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:17537840 RGD:2289986 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 ISO (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764
JBrowse link
G LOC607874 cystatin-C-like ISO RGD PMID:17027151 RGD:2306498 NCBI chr23:49,562...53,618 JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:20844122 RGD:13515123 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828
JBrowse link
G STAR steroidogenic acute regulatory protein ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:18466985 RGD:6480669 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753
JBrowse link
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598
JBrowse link
G OPN4 opsin 4 ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADRB1 adrenoceptor beta 1 IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277
JBrowse link
G NMU neuromedin U ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr13:47,865,037...48,047,697
Ensembl chr13:47,865,002...47,893,921
JBrowse link
G PER3 period circadian regulator 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242
JBrowse link
G PTGDS prostaglandin D2 synthase ISS UniProtKB GO_REF:0000024 NCBI chr 9:48,647,334...48,650,608
Ensembl chr 9:48,646,255...48,669,814
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16176
    multicellular organismal process 7613
      sleep 47
        circadian sleep/wake cycle, sleep + 34
        estivation 0
        hibernation + 0
paths to the root