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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic limb morphogenesis
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Accession:GO:0030326 term browser browse the term
Definition:The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.


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embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3526782|PMID:15537664) MGI
Ensembl		 PMID:15537664 GO_REF:0000107 MGI:3526782 NCBI chr16:48,001,408...48,004,620
Ensembl chr16:67,390,703...67,393,685 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2681052|PMID:14623241) MGI
Ensembl		 PMID:14623241 GO_REF:0000107 MGI:2681052 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chr12:82,800,273...82,822,031
Ensembl chr12:85,902,113...85,923,774 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3821640|PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chr11:69,085,434...69,244,791 JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3037623|PMID:15030763) MGI
Ensembl		 PMID:15030763 GO_REF:0000107 MGI:3037623 NCBI chr2A:72,172,658...72,191,410
Ensembl chr2A:73,670,830...73,686,433 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3588609|PMID:16040801) MGI PMID:16040801 MGI:3588609 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr10:48,950,704...48,953,815
Ensembl chr10:51,084,027...51,089,776 		JBrowse link
G DLX5 distal-less homeobox 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)		 MGI
Ensembl		 PMID:12112878 PMID:18326838 GO_REF:0000107 MGI:2181241 MGI:3794467 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186 		JBrowse link
G DLX6 distal-less homeobox 6 acts_upstream_of_or_within ISO (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)		 MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 7:88,957,570...88,962,703 JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610248|PMID:16229832) MGI
Ensembl		 PMID:16229832 GO_REF:0000107 MGI:3610248 NCBI chr11:98,051,788...98,425,676
Ensembl chr11:101,536,471...101,909,194 		JBrowse link
G EN1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:75252|PMID:7624797)
(MGI:3052394|PMID:15242796)
(MGI:81767|PMID:8684466)		 ParkinsonsUK-UCL
MGI		 PMID:7624797 PMID:8684466 PMID:15242796 MGI:3052394 MGI:75252 MGI:81767 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G FBN2 fibrillin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1934650|PMID:11350121)
(MGI:1933664|PMID:11285249)		 MGI
Ensembl		 PMID:11285249 PMID:11350121 GO_REF:0000107 MGI:1933664 MGI:1934650 NCBI chr 5:123,673,209...123,953,741
Ensembl chr 5:129,435,248...129,715,711 		JBrowse link
G FGF4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (MGI:3056042|PMID:15328019) MGI PMID:15328019 MGI:3056042 NCBI chr11:64,866,649...64,871,031 JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714711|PMID:17576930) MGI
Ensembl		 PMID:17576930 GO_REF:0000107 MGI:3714711 NCBI chr13:2,967,713...3,000,554
Ensembl chr13:21,273,333...21,307,198 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3608262|PMID:16207751) MGI PMID:16207751 MGI:3608262 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5505384|PMID:23469164) MGI
Ensembl		 PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chr 4:45,650,346...46,138,222
Ensembl chr 4:51,500,396...51,981,476 		JBrowse link
G GDF5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3513212|PMID:15542031) MGI
Ensembl		 PMID:15542031 GO_REF:0000107 MGI:3513212 NCBI chr20:31,761,199...31,766,229
Ensembl chr20:32,882,094...32,886,899 		JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3581374|PMID:15923624) MGI PMID:15923624 MGI:3581374 NCBI chr 1:123,200,111...123,224,626
Ensembl chr 1:112,328,337...112,329,413 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3851667|PMID:19422820)
(MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379)
(MGI:3608261|PMID:16284117)		 MGI
Ensembl		 PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 MGI:2384366 MGI:2445242 MGI:2445270 MGI:3608261 MGI:3851667 MGI:4367286 MGI:52587 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:2665160|PMID:12808456) MGI PMID:12808456 MGI:2665160 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HNF1A HNF1 homeobox A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334099|PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HOXA10 homeobox A10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr 7:27,815,112...27,818,829
Ensembl chr 7:27,415,833...27,423,580 		JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3043491|PMID:14668414) MGI
Ensembl		 PMID:14668414 GO_REF:0000107 MGI:3043491 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103 		JBrowse link
G HOXC10 homeobox C10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr12:34,764,956...34,770,088
Ensembl chr12:35,553,262...35,558,393 		JBrowse link
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2667742|PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:2177382|PMID:11850178) MGI PMID:11850178 MGI:2177382 NCBI chr2B:63,372,517...63,375,731 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334099|PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LRP4 LDL receptor related protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3619629|PMID:16207730)
(MGI:3703100|PMID:17119023)		 MGI
Ensembl		 PMID:16207730 PMID:17119023 GO_REF:0000107 MGI:3619629 MGI:3703100 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4458999|PMID:20359476) MGI PMID:20359476 MGI:4458999 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chr 3:149,288,323...149,487,635
Ensembl chr 3:156,888,763...157,054,207 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:39,213,339...39,265,391
Ensembl chr19:47,805,307...47,858,636 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)		 MGI
Ensembl		 PMID:15930102 PMID:19422820 GO_REF:0000107 MGI:3580732 MGI:3851667 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:3580732|PMID:15930102)
(MGI:3851667|PMID:19422820)		 MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G MUSTN1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chr 3:52,774,843...52,778,280
Ensembl chr 3:54,000,547...54,004,099 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610505|PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within ISO (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840 		JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3629247|PMID:16672333) MGI
Ensembl		 PMID:16672333 GO_REF:0000107 MGI:3629247 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797 		JBrowse link
G PBX2 PBX homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3629247|PMID:16672333) MGI
Ensembl		 PMID:16672333 GO_REF:0000107 MGI:3629247 NCBI chr 6:31,832,131...31,837,585
Ensembl chr 6:32,711,166...32,717,453 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI
Ensembl		 PMID:9729491 PMID:9882503 GO_REF:0000107 MGI:1306737 MGI:1328643 NCBI chr 1:146,151,633...146,227,926
Ensembl chr 1:149,867,634...149,943,810 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 9:100,792,324...100,849,923 JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610505|PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295 		JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2152606|PMID:11784021)
(MGI:2135419|PMID:11389830)		 MGI
Ensembl		 PMID:11389830 PMID:11784021 GO_REF:0000107 MGI:2135419 MGI:2152606 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453 		JBrowse link
G SALL4 spalt like transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3614736|PMID:16380715) MGI
Ensembl		 PMID:16380715 GO_REF:0000107 MGI:3614736 NCBI chr20:48,130,387...48,150,569
Ensembl chr20:49,254,039...49,273,589 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3851667|PMID:19422820)
(MGI:2135419|PMID:11389830)
(MGI:3053241|PMID:15315763)		 MGI
Ensembl		 PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000107 MGI:2135419 MGI:3053241 MGI:3851667 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SHOX2 short stature homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714677|PMID:17481601)
(MGI:3621617|PMID:16537395)		 MGI
Ensembl		 PMID:16537395 PMID:17481601 GO_REF:0000107 MGI:3621617 MGI:3714677 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:2445270|PMID:12435627) MGI PMID:12435627 MGI:2445270 NCBI chr 1:944,428...1,029,695
Ensembl chr 1:2,091,620...2,174,080 		JBrowse link
G SP8 Sp8 transcription factor acts_upstream_of_or_within
involved_in		 ISO (MGI:2679409|PMID:14597661)
(MGI:3526745|PMID:15358670)		 MGI
UniProt		 PMID:14597661 PMID:15358670 MGI:2679409 MGI:3526745 NCBI chr 7:21,456,649...21,463,844 JBrowse link
G SP9 Sp9 transcription factor involved_in ISO (MGI:3526745|PMID:15358670) UniProt PMID:15358670 MGI:3526745 NCBI chr2B:61,612,140...61,615,694 JBrowse link
G TBX4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2660720|PMID:12736212) MGI
Ensembl		 PMID:12736212 GO_REF:0000107 MGI:2660720 NCBI chr17:55,554,549...55,587,253
Ensembl chr17:60,677,518...60,705,413 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2660722|PMID:12736217)
(MGI:3614736|PMID:16380715)		 MGI
Ensembl		 PMID:12736217 PMID:16380715 GO_REF:0000107 MGI:2660722 MGI:3614736 NCBI chr12:111,954,222...112,009,261
Ensembl chr12:115,333,609...115,389,739 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3794467|PMID:18326838)
(MGI:1335634|PMID:10227293)		 MGI
Ensembl		 PMID:10227293 PMID:18326838 GO_REF:0000107 MGI:1335634 MGI:3794467 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2384366|PMID:12142027)
(MGI:3042355|PMID:15030764)
(MGI:1934650|PMID:11350121)		 MGI PMID:11350121 PMID:12142027 PMID:15030764 MGI:1934650 MGI:2384366 MGI:3042355 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5314316|PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chr 4:33,511,283...33,616,946
Ensembl chr 4:39,365,276...39,462,903 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1329804|PMID:10021340) MGI
Ensembl		 PMID:10021340 GO_REF:0000107 MGI:1329804 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3052394|PMID:15242796) MGI
Ensembl		 PMID:15242796 GO_REF:0000107 MGI:3052394 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI MGI:61278 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3581932|PMID:15967824) MGI
Ensembl		 PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3581932|PMID:15967824) MGI
Ensembl		 PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chr2A:90,862,070...90,909,833
Ensembl chr2A:112,337,927...112,385,079 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608163|PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 MGI:3608163 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:1095762|PMID:9268572)
(MGI:1095777|PMID:9272948)		 MGI PMID:9268572 PMID:9272948 MGI:1095762 MGI:1095777 NCBI chr11:44,219,865...44,269,597 JBrowse link
G B9D1 B9 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5300833|PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr17:31,735,065...31,779,454
Ensembl chr17:36,914,969...36,941,391 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095762|PMID:9268572) MGI
Ensembl		 PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4430000|PMID:20043884) MGI
Ensembl		 PMID:20043884 GO_REF:0000107 MGI:4430000 NCBI chr10:83,185,040...83,353,239
Ensembl chr10:86,837,469...86,912,912 		JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3799383|PMID:18539921) MGI
Ensembl		 PMID:18539921 GO_REF:0000107 MGI:3799383 NCBI chr 8:53,385,837...53,417,019
Ensembl chr 8:50,753,792...50,785,055 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3821640|PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chr11:69,085,434...69,244,791 JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5648689|PMID:25877302) MGI
Ensembl		 PMID:25877302 GO_REF:0000107 MGI:5648689 NCBI chr 5:73,122,305...73,265,343
Ensembl chr 5:78,402,466...78,544,807 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4430000|PMID:20043884)
(MGI:2670493|PMID:12923052)		 MGI
Ensembl		 PMID:12923052 PMID:20043884 GO_REF:0000107 MGI:2670493 MGI:4430000 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:20,166,019...20,290,803
Ensembl chr 1:21,206,199...21,278,909 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1344213|PMID:10471509)
(MGI:1278141|PMID:9733575)		 Ensembl
MGI		 PMID:9733575 PMID:10471509 GO_REF:0000107 MGI:1278141 MGI:1344213 NCBI chr10:98,212,907...98,297,477
Ensembl chr10:101,685,804...101,769,672 		JBrowse link
G FLVCR1 FLVCR heme transporter 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3775000|PMID:18258918) MGI
Ensembl		 PMID:18258918 GO_REF:0000107 MGI:3775000 NCBI chr 1:188,425,697...188,466,721
Ensembl chr 1:193,284,158...193,320,554 		JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5646594|PMID:26234751) MGI
Ensembl		 PMID:26234751 GO_REF:0000107 MGI:5646594 NCBI chr13:19,900,324...20,103,303
Ensembl chr13:38,490,750...38,687,048 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4367921|PMID:19877275)
(MGI:5912570|PMID:27158779)		 MGI PMID:19877275 PMID:27158779 MGI:4367921 MGI:5912570 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) MGI PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr 9:58,079,700...58,082,849
Ensembl chr 9:86,139,009...86,140,045 		JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3833793|PMID:19056373) MGI
Ensembl		 PMID:19056373 GO_REF:0000107 MGI:3833793 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983)
(MGI:3765370|PMID:17714700)
(MGI:5439039|PMID:22841643)		 MGI
Ensembl		 PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 MGI:1095762 MGI:3692156 MGI:3765370 MGI:3821634 MGI:5439039 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GNA12 G protein subunit alpha 12 acts_upstream_of_or_within ISO (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr 7:2,989,832...3,104,848 JBrowse link
G GNAQ G protein subunit alpha q acts_upstream_of_or_within ISO (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr 9:46,816,409...47,129,116
Ensembl chr 9:76,575,815...76,773,849 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4943100|PMID:21377456) MGI
Ensembl		 PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chr 8:98,129,147...98,308,120
Ensembl chr 8:100,308,575...100,471,830 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (MGI:2429440|PMID:12070084) MGI PMID:12070084 MGI:2429440 NCBI chr 4:165,755,000...165,758,735 JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004 		JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103 		JBrowse link
G HOXC11 homeobox C11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr12:34,777,790...34,782,104
Ensembl chr12:35,567,093...35,570,396 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 MGI:2667742 MGI:3765370 MGI:83869 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HOXD12 homeobox D12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)		 MGI
Ensembl		 PMID:8900279 PMID:17714700 GO_REF:0000107 MGI:3765370 MGI:83869 NCBI chr2B:63,379,611...63,382,293
Ensembl chr2B:181,089,181...181,091,055 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)
(MGI:1097490|PMID:9342042)		 MGI PMID:8900279 PMID:9342042 PMID:17714700 MGI:1097490 MGI:3765370 MGI:83869 NCBI chr2B:63,372,517...63,375,731 JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5505384|PMID:23469164) MGI
Ensembl		 PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chr16:130,150...232,369
Ensembl chr16:1,566,824...1,658,884 		JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3579954|PMID:15930098) MGI
Ensembl		 PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chr20:39,929,523...39,986,072
Ensembl chr20:41,023,517...41,080,500 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:2660994|PMID:12701101), (MGI:3692156|PMID:16254602)
(MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098)
(MGI:3579954|PMID:15930098)
(MGI:3821634|PMID:19036983)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 MGI:2660994 MGI:3577662 MGI:3579954 MGI:3692156 MGI:3821634 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4822496|PMID:20660756) MGI
Ensembl		 PMID:20660756 GO_REF:0000107 MGI:4822496 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G INTU inturned planar cell polarity protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5644615|PMID:25774014) MGI
Ensembl		 PMID:25774014 GO_REF:0000107 MGI:5644615 NCBI chr 4:119,793,245...119,890,949
Ensembl chr 4:131,109,733...131,186,590 		JBrowse link
G LMBR1 limb development membrane protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151954|PMID:11606546) MGI
Ensembl		 PMID:11606546 GO_REF:0000107 MGI:2151954 NCBI chr 7:148,301,263...148,512,407
Ensembl chr 7:159,999,389...160,152,858 		JBrowse link
G LNPK lunapark, ER junction formation factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1097490|PMID:9342042) MGI
Ensembl		 PMID:9342042 GO_REF:0000107 MGI:1097490 NCBI chr2B:63,197,335...63,279,473
Ensembl chr2B:180,909,968...180,989,448 		JBrowse link
G LOC100983857 transmembrane protein 231 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5300833|PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr16:56,107,360...56,126,172
Ensembl chr16:75,455,303...75,473,874 		JBrowse link
G LOC100990238 intraflagellar transport protein 122 homolog acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr 3:126,498,018...126,578,211
Ensembl chr 3:133,851,433...133,930,117 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3623169|PMID:16517118) Ensembl
MGI		 PMID:16517118 GO_REF:0000107 MGI:3623169 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (MGI:3045836|PMID:15142971) MGI PMID:15142971 MGI:3045836 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512)
(MGI:3045836|PMID:15142971)		 MGI PMID:15142971 PMID:19795512 MGI:3045836 MGI:4413372 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5771618|PMID:26755636) MGI
Ensembl		 PMID:26755636 GO_REF:0000107 MGI:5771618 NCBI chr2B:60,362,635...60,555,445
Ensembl chr2B:177,818,344...178,010,556 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4367169|PMID:19776033)
(MGI:4868517|PMID:21045211)
(MGI:5487695|PMID:23454480)		 MGI
Ensembl		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:4868517 MGI:5487695 NCBI chr17:52,281,443...52,295,919
Ensembl chr17:57,137,254...57,151,328 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr2A:15,925,130...15,931,605 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chr 6:56,744,948...56,780,187
Ensembl chr 6:58,375,559...58,411,107 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chr 9:62,782,183...63,005,626
Ensembl chr 9:90,851,983...90,965,084 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3806414|PMID:18729207) MGI
Ensembl		 PMID:18729207 GO_REF:0000107 MGI:3806414 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3039193|PMID:15075292), (MGI:4822496|PMID:20660756)
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
(MGI:3579954|PMID:15930098)		 MGI
Ensembl		 PMID:15075292 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000107 MGI:3039193 MGI:3579954 MGI:3710451 MGI:3710452 MGI:4822496 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4439200|PMID:20159594) MGI
Ensembl		 PMID:20159594 GO_REF:0000107 MGI:4439200 NCBI chr 6:118,884,928...119,139,138
Ensembl chr 6:123,022,008...123,273,810 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:55,501,932...55,511,537
Ensembl chr17:60,622,098...60,630,189 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5532232|PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,481,043...43,485,189
Ensembl chr17:48,214,392...48,217,773 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr2B:125,558,537...125,637,733
Ensembl chr2B:244,405,992...244,481,785 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (MGI:5493390|PMID:23141541) MGI PMID:23141541 MGI:5493390 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) MGI
Ensembl		 PMID:19286674 PMID:19334287 GO_REF:0000107 MGI:3841503 MGI:3844764 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G WDPCP WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5544506|PMID:24302887) MGI
Ensembl		 PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr2A:63,180,279...63,658,804
Ensembl chr2A:64,325,379...64,785,256 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4413372|PMID:19795512) MGI
Ensembl		 PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:19191224 RGD:2312786 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI
Ensembl		 PMID:15069081 PMID:20034106 GO_REF:0000107 MGI:3046038 MGI:4422129 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 1:112,706,782...112,717,635
Ensembl chr 1:127,624,197...127,634,004 		JBrowse link
G ALX4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr11:44,219,865...44,269,597 JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,166,672...2,817,827
Ensembl chr12:2,114,140...2,744,826 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:71462|PMID:7720575) MGI
Ensembl		 PMID:7720575 GO_REF:0000107 MGI:71462 NCBI chr 1:132,043,097...132,049,366
Ensembl chr 1:135,864,807...135,870,145 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3055626|PMID:15371327) MGI
Ensembl		 PMID:15371327 GO_REF:0000107 MGI:3055626 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5462316|PMID:22916278) MGI
Ensembl		 PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103 		JBrowse link
G HOXA13 homeobox A13 acts_upstream_of_or_within ISO (MGI:3530958|PMID:15733672) MGI PMID:15733672 MGI:3530958 NCBI chr 7:27,838,656...27,844,562 JBrowse link
G HOXA9 homeobox A9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797) MGI
Ensembl		 PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chr 7:27,806,942...27,810,304
Ensembl chr 7:27,405,931...27,409,984 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797) MGI
Ensembl		 PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chr2B:63,401,813...63,404,731
Ensembl chr2B:181,112,002...181,113,415 		JBrowse link
G LNPK lunapark, ER junction formation factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1097490|PMID:9342042)
(MGI:5462316|PMID:22916278)		 MGI
Ensembl		 PMID:9342042 PMID:22916278 GO_REF:0000107 MGI:1097490 MGI:5462316 NCBI chr2B:63,197,335...63,279,473
Ensembl chr2B:180,909,968...180,989,448 		JBrowse link
G LOC100990238 intraflagellar transport protein 122 homolog involved_in ISO (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr 3:126,498,018...126,578,211
Ensembl chr 3:133,851,433...133,930,117 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413396|PMID:19653321)
(MGI:3578068|PMID:15880584)
(MGI:3774879|PMID:18256198)
(MGI:1891551|PMID:11029008)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:166,099,530...166,677,739
Ensembl chr 3:174,154,814...174,731,252 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G RDH10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3709664|PMID:17473173) MGI
Ensembl		 PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5424521|PMID:23213437) MGI
Ensembl		 PMID:23213437 GO_REF:0000107 MGI:5424521 NCBI chr 9:35,886,741...35,974,133
Ensembl chr 9:36,699,631...36,774,116 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3715393|PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G RSPO2 R-spondin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3774879|PMID:18256198) MGI
Ensembl		 PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 8:104,535,751...104,721,463
Ensembl chr 8:106,685,116...106,870,494 		JBrowse link
G RUNX2 RUNX family transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5462316|PMID:22916278) MGI
Ensembl		 PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI
Ensembl		 PMID:11118883 PMID:11476582 GO_REF:0000107 MGI:1928592 MGI:2149276 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SHOX2 short stature homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5462316|PMID:22916278) MGI
Ensembl		 PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567) MGI
Ensembl		 PMID:11572777 PMID:12490567 GO_REF:0000107 MGI:2150876 MGI:2448173 NCBI chr12:111,954,222...112,009,261
Ensembl chr12:115,333,609...115,389,739 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5824492|PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2180404|PMID:12175489) MGI PMID:12175489 MGI:2180404 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,685,160...10,741,402
Ensembl chr17:10,862,310...10,918,865 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578068|PMID:15880584)
(MGI:1194987|PMID:9362463)		 MGI
Ensembl		 PMID:9362463 PMID:15880584 GO_REF:0000107 MGI:1194987 MGI:3578068 MGI:48652 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr 1:203,320,990...203,350,599
Ensembl chr 1:208,300,609...208,327,191 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr2A:100,535,363...100,993,626 JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 1:112,706,782...112,717,635
Ensembl chr 1:127,624,197...127,634,004 		JBrowse link
G ALX4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr11:44,219,865...44,269,597 JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1889107|PMID:10964473) MGI
Ensembl		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3611161|PMID:16207732) MGI
Ensembl		 PMID:16207732 GO_REF:0000107 MGI:3611161 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3773938|PMID:18231602)
(MGI:2670493|PMID:12923052)		 MGI
Ensembl		 PMID:12923052 PMID:18231602 GO_REF:0000107 MGI:2670493 MGI:3773938 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3609457|PMID:16319892) MGI PMID:16319892 MGI:3609457 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G FGF4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chr11:64,866,649...64,871,031 JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608165|PMID:16245339) MGI
Ensembl		 PMID:16245339 GO_REF:0000107 MGI:3608165 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1889107|PMID:10964473) MGI
Ensembl		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441 		JBrowse link
G LOC100978090 protein ALEX involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,204,188...55,206,608
Ensembl chr20:56,474,459...56,621,747 		JBrowse link
G LOC100990650 guanine nucleotide-binding protein G(s) subunit alpha acts_upstream_of_or_within ISO (MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:3619837 NCBI chr20:55,190,607...55,262,245 JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3578068|PMID:15880584)
(MGI:4413396|PMID:19653321)
(MGI:3774879|PMID:18256198)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:166,099,530...166,677,739
Ensembl chr 3:174,154,814...174,731,252 		JBrowse link
G MED1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2682174|PMID:14500757) MGI
Ensembl		 PMID:14500757 GO_REF:0000107 MGI:2682174 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118 		JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr11:97,890,811...97,902,778
Ensembl chr11:101,377,001...101,387,679 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608163|PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 MGI:3608163 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3773938|PMID:18231602) MGI
Ensembl		 PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chr 5:130,422,920...130,429,828
Ensembl chr 5:136,565,285...136,570,350 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3773938|PMID:18231602) MGI PMID:18231602 MGI:3773938 NCBI chr 4:103,112,624...103,137,356 JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334064|PMID:10075839) MGI
Ensembl		 PMID:10075839 GO_REF:0000107 MGI:1334064 NCBI chr 3:24,729,220...25,499,187
Ensembl chr 3:25,660,922...25,833,297 		JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334064|PMID:10075839) MGI
Ensembl		 PMID:10075839 GO_REF:0000107 MGI:1334064 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3715393|PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G RSPO2 R-spondin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3774879|PMID:18256198) MGI
Ensembl		 PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 8:104,535,751...104,721,463
Ensembl chr 8:106,685,116...106,870,494 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1928592|PMID:11118883) MGI
Ensembl		 PMID:11118883 GO_REF:0000107 MGI:1928592 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3604915|PMID:16192310) MGI PMID:16192310 MGI:3604915 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5532232|PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316 		JBrowse link
G TBX4 T-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:55,554,549...55,587,253
Ensembl chr17:60,677,518...60,705,413 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5824492|PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1100098|PMID:8988167) BHF-UCL PMID:8988167 MGI:1100098 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,685,160...10,741,402
Ensembl chr17:10,862,310...10,918,865 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578068|PMID:15880584) MGI
Ensembl		 PMID:15880584 GO_REF:0000107 MGI:3578068 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:1859075|PMID:10835630) RGD
Ensembl
MGI		 PMID:10835630 PMID:19191224 GO_REF:0000107 MGI:1859075 RGD:2312786 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5499279|PMID:23439395) MGI
Ensembl		 PMID:23439395 GO_REF:0000107 MGI:5499279 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15372
    developmental process 6185
      anatomical structure morphogenesis 2664
        appendage morphogenesis 179
          limb morphogenesis 179
            embryonic limb morphogenesis 146
              embryonic digit morphogenesis + 72
              embryonic forelimb morphogenesis 36
              embryonic hindlimb morphogenesis 36
              embryonic skeletal limb joint morphogenesis 3
Path 2
Term Annotations click to browse term
  biological_process 15372
    developmental process 6185
      anatomical structure development 5769
        multicellular organism development 4717
          appendage development 212
            appendage morphogenesis 179
              limb morphogenesis 179
                embryonic limb morphogenesis 146
                  embryonic digit morphogenesis + 72
                  embryonic forelimb morphogenesis 36
                  embryonic hindlimb morphogenesis 36
                  embryonic skeletal limb joint morphogenesis 3
paths to the root