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ONTOLOGY REPORT - ANNOTATIONS


Term:cholesterol transport
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Accession:GO:0030301 term browser browse the term
Definition:The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.



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cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 IDA
IMP
RGD PMID:12909583 PMID:14993246 RGD:1304419, RGD:1358264 NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:95,416,984...95,490,647 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 acts_upstream_of_or_within TAS
ISO
(PMID:15319426) RGD PMID:15319426 PMID:11590207 RGD:634620 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within IDA
ISO
MGI:1857127|MGI:2180783 (PMID:9300780), (PMID:9507992), (PMID:9684752)
(PMID:10559507)
RGD PMID:9300780 PMID:9507992 PMID:9684752 PMID:10559507 PMID:11773045 More... RGD:1298673, RGD:1626399 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Apoa2 apolipoprotein A2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:1537840 GO_REF:0000033, RGD:1626399 NCBI chr13:83,644,460...83,646,358 JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:2563166)
MGI:2157090 (PMID:7593600)
GO_REF:0000033
RGD
GO_Central
PMID:2563166 PMID:7593600 GO_REF:0000033 NCBI chr 6:36,563,704...36,603,300 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator acts_upstream_of_or_within ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:52,692,337...52,704,156 JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:12376530) RGD PMID:12376530 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856709 (PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 NOT|acts_upstream_of_or_within ISO (PMID:12496272) RGD PMID:12496272 NCBI chr 7:107,285,584...107,288,702 JBrowse link
G Lcat lecithin cholesterol acyltransferase acts_upstream_of_or_within ISO (PMID:10559507) RGD PMID:10559507 NCBI chr19:33,834,748...33,838,214 JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within
ISO (PMID:17142622)
MGI:1857212 (PMID:17148552)
RGD PMID:17142622 PMID:17148552 NCBI chr 8:20,270,020...20,292,981 JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO MGI:2451080 (PMID:29599133) RGD PMID:29599133 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857182 (PMID:8798380)
Ensembl
RGD
PMID:8798380 GO_REF:0000107 NCBI chr 8:71,509,633...71,635,663 JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (PMID:12376530) RGD PMID:12376530 NCBI chr16:52,717,775...52,803,602 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
ISO (PMID:18772377)
MGI:1857409 (PMID:21697390)
RGD PMID:18772377 PMID:21697390 NCBI chr18:3,379,482...3,425,100 JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581), (PMID:24336247)
(PMID:14976318)
RGD PMID:14976318 PMID:17140581 PMID:24336247 NCBI chr14:81,071,448...81,091,113 JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO (PMID:17018531), (PMID:18772377)
(PMID:21315718)
RGD PMID:17018531 PMID:18772377 PMID:21315718 NCBI chr 6:104,397,239...104,418,161 JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:167,210,945...167,256,219 JBrowse link
G Pdzk1 PDZ domain containing 1 NAS RGD PMID:10829064 RGD:70627 NCBI chr 2:184,376,161...184,407,514 JBrowse link
G Scarb1 scavenger receptor class B, member 1 acts_upstream_of_or_within ISO MGI:1928989 (PMID:10559220), (PMID:14729860), (PMID:8753864) RGD PMID:8753864 PMID:10559220 PMID:14729860 NCBI chr12:36,957,302...37,023,982 JBrowse link
G Stard3 StAR-related lipid transfer domain containing 3 involved_in ISO
IBA
(PMID:28377464), (PMID:33124732)
GO_REF:0000033
RGD
GO_Central
PMID:28377464 PMID:33124732 GO_REF:0000033 NCBI chr10:83,357,329...83,379,873 JBrowse link
G Stard3nl STARD3 N-terminal like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:45,583,278...45,617,226 JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:33124732) RGD PMID:33124732 NCBI chr 9:105,177,904...105,208,400 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:33124732) RGD PMID:33124732 NCBI chr 3:162,535,974...162,578,747 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (PMID:10637304) RGD PMID:10637304 NCBI chr13:22,907,105...22,932,200 JBrowse link
cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:12202492)
(PMID:22179027)
MGI:1935192|MGI:3613250 (PMID:12869555), (PMID:15269218), (PMID:15520449), (PMID:17148552)
UniProtKB:P02647|UniProtKB:P02649 (PMID:10431236), (PMID:11162594), (PMID:16443932), (PMID:16702602), (PMID:19556522), (PMID:23931754), (PMID:25084135), (PMID:28373057), (PMID:35974019)
RGD PMID:10431236 PMID:11162594 PMID:12202492 PMID:12869555 PMID:15269218 More... NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 acts_upstream_of ISO MGI:4461044 (PMID:23931754) RGD PMID:23931754 NCBI chr 9:80,272,121...80,445,340 JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISO (PMID:20382126) RGD PMID:20382126 NCBI chr10:95,739,610...95,808,633 JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO
IBA
IEA
ISS
(PMID:14570867)
(PMID:27472885)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
Alzheimers_University_of_Toronto
UniProt
PMID:14570867 PMID:27472885 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,691,452...9,711,466 JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:95,416,984...95,490,647 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO
IBA
(PMID:15994327), (PMID:16702602), (PMID:24576892)
(PMID:16556852), (PMID:21481393)
GO_REF:0000033
RGD
GO_Central
PMID:15994327 PMID:16556852 PMID:16702602 PMID:21481393 PMID:24576892 GO_REF:0000033 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in
NOT|involved_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:15210959), (PMID:18039927)
(PMID:16556852)
GO_REF:0000033
GO_REF:0000107
(PMID:33141061)
UniProt
RGD
GO_Central
Ensembl
PMID:15210959 PMID:16556852 PMID:18039927 PMID:33141061 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:53,508,005...53,525,314 JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO
IBA
ISS
UniProtKB:Q99PE8 (PMID:14504269), (PMID:27144356)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:14504269 PMID:27144356 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:9,965,118...9,990,563 JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO
IBA
UniProtKB:Q9DBM0|UniProtKB:Q9H222 (PMID:14504269), (PMID:27144356)
GO_REF:0000033
RGD
GO_Central
PMID:14504269 PMID:27144356 GO_REF:0000033 NCBI chr 6:9,945,629...9,964,912 JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:11162594), (PMID:12202492), (PMID:14703508), (PMID:15358760), (PMID:16443932), (PMID:21481393)
MGI:2180783 (PMID:11744719), (PMID:12869555), (PMID:15269218), (PMID:9186920), (PMID:9275209)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:9186920 PMID:9275209 PMID:11162594 PMID:11744719 PMID:12202492 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr13:83,644,460...83,646,358 JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IBA
IEA
(PMID:11162594), (PMID:1935934)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:1935934 PMID:11162594 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160 JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:46,561,180...46,563,818 JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104539 (PMID:22363685)
Ensembl
RGD
PMID:22363685 GO_REF:0000107 NCBI chr 6:36,563,704...36,603,300 JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:79,347,057...79,350,340 JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:79,329,429...79,334,397 JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:11162594), (PMID:16443932) RGD PMID:11162594 PMID:16443932 NCBI chr 8:46,531,478...46,533,658 JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
MGI:2137814 (PMID:11551841), (PMID:15269218)
GO_REF:0000033
(PMID:11162594), (PMID:16443932), (PMID:23620513)
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:11162594 PMID:11551841 PMID:15269218 PMID:16443932 PMID:23620513 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Apof apolipoprotein F acts_upstream_of_or_within ISO MGI:88052 (PMID:22363685) RGD PMID:22363685 NCBI chr 7:700,688...702,130 JBrowse link
G Apom apolipoprotein M involved_in ISO
IBA
IEA
(PMID:15793583), (PMID:16682745)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15793583 PMID:16682745 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,690,950...3,693,550 JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:17499231 RGD:2289119 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:30237900) RGD PMID:30237900 NCBI chr11:96,072,371...96,091,956 JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2451080 (PMID:29599133)
Ensembl
RGD
PMID:29599133 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16141411)
MGI:1857409 (PMID:17148552)
RGD PMID:16141411 PMID:17148552 NCBI chr18:3,379,482...3,425,100 JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO
IBA
(PMID:16141411), (PMID:25339683)
(PMID:21315718)
GO_REF:0000033
RGD
GO_Central
PMID:16141411 PMID:21315718 PMID:25339683 GO_REF:0000033 NCBI chr 6:104,397,239...104,418,161 JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IBA
IEA
(PMID:12202492)
(PMID:14718538), (PMID:21481393)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12202492 PMID:14718538 PMID:21481393 GO_REF:0000033 GO_REF:0000107 NCBI chr12:36,957,302...37,023,982 JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in ISO
IBA
IEA
(PMID:15308631)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15308631 GO_REF:0000033 GO_REF:0000107 NCBI chr13:68,552,274...68,597,529 JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in ISO
IBA
IEA
(PMID:15308631)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15308631 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:135,160,424...135,173,521 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO MGI:6451766 (PMID:28237315), (PMID:31637311) RGD PMID:28237315 PMID:31637311 NCBI chr 3:109,007,658...109,072,904 JBrowse link
G Stx12 syntaxin 12 involved_in ISO
IEA
(PMID:15469992)
GO_REF:0000107
RGD
Ensembl
PMID:15469992 GO_REF:0000107 NCBI chr 5:150,347,554...150,376,426 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:31391339)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31391339 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682 JBrowse link
cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO
IEA
(PMID:14718538)
GO_REF:0000107
RGD
Ensembl
PMID:14718538 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17507371)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17507371 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd36l1 CD36 molecule like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:17,424,749...17,465,808 JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:6299582)
(PMID:18175806)
GO_REF:0000107
RGD
Ensembl
PMID:6299582 PMID:18175806 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981 JBrowse link
G LOC134486712 platelet glycoprotein 4-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in IDA PMID:17135346 UniProt PMID:17135346 RGD:151665736 NCBI chr14:81,071,448...81,091,113 JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IBA
IEA
(PMID:11208913), (PMID:26965621)
(PMID:14718538), (PMID:18175806), (PMID:21481393)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11208913 PMID:14718538 PMID:18175806 PMID:21481393 PMID:26965621 GO_REF:0000033 GO_REF:0000107 NCBI chr12:36,957,302...37,023,982 JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IBA
(PMID:18403318)
GO_REF:0000033
RGD
GO_Central
PMID:18403318 GO_REF:0000033 NCBI chr18:24,814,683...24,830,024 JBrowse link
G Stard5 StAR-related lipid transfer domain containing 5 involved_in ISO
IBA
(PMID:18403318)
GO_REF:0000033
RGD
GO_Central
PMID:18403318 GO_REF:0000033 NCBI chr 1:137,606,151...137,616,017 JBrowse link
cholesterol transport involved in cholesterol storage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IBA
(PMID:18403318)
GO_REF:0000033
RGD
GO_Central
PMID:18403318 GO_REF:0000033 NCBI chr18:24,814,683...24,830,024 JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(PMID:21802320)
UniProt
RGD
PMID:21802320 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605 JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:25144390) RGD PMID:25144390 NCBI chr 1:209,845,827...209,875,561 JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236) RGD PMID:10431236 NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:27238017), (PMID:27378690), (PMID:28784760), (PMID:9211849) RGD PMID:9211849 PMID:27238017 PMID:27378690 PMID:28784760 NCBI chr18:3,379,482...3,425,100 JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15937921), (PMID:17018531), (PMID:18823126), (PMID:27238017)
(PMID:17018531)
GO_REF:0000033
UniProtKB:Q96E22 (PMID:19723497)
RGD
GO_Central
PMID:15937921 PMID:17018531 PMID:18823126 PMID:19723497 PMID:27238017 GO_REF:0000033 NCBI chr 6:104,397,239...104,418,161 JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:29514919) RGD PMID:29514919 NCBI chr 1:218,313,455...218,343,263 JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:167,210,945...167,256,219 JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:74,118,922...74,141,760 JBrowse link
G Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing involved_in ISO
IBA
(PMID:29514919)
GO_REF:0000033
RGD
GO_Central
PMID:29514919 GO_REF:0000033 NCBI chr13:21,806,972...21,902,807 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO
ISS
(PMID:7642518)
GO_REF:0000024
RGD
UniProt
PMID:7642518 GO_REF:0000024 NCBI chr 5:128,035,714...128,110,015 JBrowse link
G Serac1 serine active site containing 1 involved_in ISO (PMID:22683713) RGD PMID:22683713 NCBI chr 1:49,025,845...49,061,853 JBrowse link
G Snord60 small nucleolar RNA, C/D box 60 acts_upstream_of_or_within ISO (PMID:24174535) RGD PMID:24174535 NCBI chr10:13,552,773...13,552,855 JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14617579 GO_REF:0000033, RGD:4145640 NCBI chr16:72,969,824...72,974,447 JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IBA
(PMID:18403318)
GO_REF:0000033
RGD
GO_Central
PMID:18403318 GO_REF:0000033 NCBI chr18:24,814,683...24,830,024 JBrowse link
G Tspo2 translocator protein 2 involved_in ISO (PMID:32358067) RGD PMID:32358067 NCBI chr 9:12,544,615...12,548,563 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA
(PMID:10637304)
GO_REF:0000107
RGD
Ensembl
PMID:10637304 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888 JBrowse link
negative regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:12042316) RGD PMID:12042316 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Egf epidermal growth factor involved_in ISO (PMID:20037141) RGD PMID:20037141 NCBI chr 2:220,893,660...220,976,331 JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in ISO (PMID:19752193) RGD PMID:19752193 NCBI chr  X:156,919,927...156,929,825 JBrowse link
G Mir128-1 microRNA 128-1 acts_upstream_of
involved_in
ISO (PMID:23990020)
(PMID:26501192)
RGD PMID:23990020 PMID:26501192 NCBI chr13:39,699,449...39,699,530 JBrowse link
G Mir128-2 microRNA 128-2 acts_upstream_of
involved_in
ISO (PMID:23990020)
(PMID:26501192)
RGD PMID:23990020 PMID:26501192 NCBI chr 8:112,085,467...112,085,550 JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:26501192) RGD PMID:26501192 NCBI chr11:83,880,163...83,880,244 JBrowse link
G Mir144 microRNA 144 involved_in ISO UniProtKB:O95477 (PMID:23519695), (PMID:24733347) RGD PMID:23519695 PMID:24733347 NCBI chr10:62,961,348...62,961,430 JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:24135019) RGD PMID:24135019 NCBI chr18:57,369,983...57,370,070 JBrowse link
G Mir148a microRNA 148a involved_in ISO (PMID:26437365), (PMID:26501192) RGD PMID:26437365 PMID:26501192 NCBI chr 4:80,333,762...80,333,858 JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:25084135), (PMID:25765596) RGD PMID:25084135 PMID:25765596 NCBI chr15:92,181,214...92,181,300 JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:25084135), (PMID:25765596) RGD PMID:25084135 PMID:25765596 NCBI chr  X:132,422,072...132,422,167 JBrowse link
G Mir206 microRNA 206 acts_upstream_of ISO (PMID:24603323) RGD PMID:24603323 NCBI chr 9:23,094,249...23,094,332 JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:24608080) RGD PMID:24608080 NCBI chr19:23,954,831...23,954,917 JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:24608080), (PMID:26520906) RGD PMID:24608080 PMID:26520906 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Mir301b microRNA 301b involved_in ISO (PMID:26501192) RGD PMID:26501192 NCBI chr11:83,879,816...83,879,893 JBrowse link
G Mir33 microRNA 33 involved_in
acts_upstream_of
ISO (PMID:20466885), (PMID:20566875), (PMID:20855588)
(PMID:20466882)
RGD PMID:20466882 PMID:20466885 PMID:20566875 PMID:20855588 NCBI chr 7:115,593,952...115,594,020 JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:29584810) RGD PMID:29584810 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IEA
ISO
GO_REF:0000107
(PMID:20844270)
Ensembl
RGD
PMID:20844270 GO_REF:0000107 NCBI chr10:2,104,927...2,117,998 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:21931618)
Ensembl
RGD
PMID:21931618 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:115,542,774...115,600,945 JBrowse link
negative regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in IEA
ISO
GO_REF:0000107
(PMID:11222466)
Ensembl
RGD
PMID:11222466 GO_REF:0000107 NCBI chr11:91,226,524...91,240,244 JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:83,644,460...83,646,358 JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:15778093) RGD PMID:15778093 NCBI chr 8:46,531,478...46,533,658 JBrowse link
negative regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:8636092) RGD PMID:8636092 NCBI chr13:83,644,460...83,646,358 JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO
IBA
(PMID:10978346)
GO_REF:0000033
RGD
GO_Central
PMID:10978346 GO_REF:0000033 NCBI chr 1:79,347,057...79,350,340 JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:15778093) RGD PMID:15778093 NCBI chr 1:79,329,429...79,334,397 JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of ISO (PMID:16938301) RGD PMID:16938301 NCBI chr 6:78,593,844...78,597,307 JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:28,642,660...28,662,689 JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:23285084) RGD PMID:23285084 NCBI chr15:92,180,629...92,180,712 JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795 JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:26520906) RGD PMID:26520906 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,440,102...126,462,507 JBrowse link
negative regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir144 microRNA 144 involved_in ISO UniProtKB:O95477 (PMID:24733347) RGD PMID:24733347 NCBI chr10:62,961,348...62,961,430 JBrowse link
positive regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:15210959) RGD PMID:15210959 NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 involved_in
acts_upstream_of_or_within
ISO (PMID:23931754)
MGI:1352463|MGI:4461044 (PMID:23931754)
RGD PMID:23931754 NCBI chr 9:80,272,121...80,445,340 JBrowse link
G Abca3 ATP binding cassette subfamily A member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25817392)
UniProt
RGD
PMID:25817392 GO_REF:0000024 NCBI chr10:13,886,948...13,944,286 JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:18429932)
Alzheimers_University_of_Toronto
RGD
PMID:18429932 GO_REF:0000024 NCBI chr 7:9,691,452...9,711,466 JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:95,416,984...95,490,647 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15210959) RGD PMID:15210959 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:15210959)
Ensembl
RGD
PMID:15210959 GO_REF:0000107 NCBI chr 8:53,508,005...53,525,314 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO
GO_REF:0000024
(PMID:18703020)
UniProt
RGD
PMID:18703020 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244 JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA
ISS
(PMID:27472885)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27472885 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:31902528)
UniProtKB:P08226 (PMID:12042316), (PMID:12401887), (PMID:14754908)
Ensembl
RGD
PMID:12042316 PMID:12401887 PMID:14754908 PMID:31902528 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:24576892)
GO_REF:0000107
RGD
Ensembl
PMID:24576892 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16971496), (PMID:18599737), (PMID:18762277) RGD PMID:16971496 PMID:18599737 PMID:18762277 NCBI chr19:30,046,494...30,085,039 JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in ISO (PMID:28082258) RGD PMID:28082258 NCBI chr 8:23,957,258...24,064,343 JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:19481530) RGD PMID:19481530 NCBI chr10:55,136,043...55,139,106 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:19718435) RGD PMID:19718435 NCBI chr 7:65,265,639...65,346,196 JBrowse link
G Mir206 microRNA 206 acts_upstream_of ISO (PMID:24603323) RGD PMID:24603323 NCBI chr 9:23,094,249...23,094,332 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
UniProtKB:P25963 (PMID:16938301)
Ensembl
RGD
PMID:16938301 GO_REF:0000107 NCBI chr 2:226,689,745...226,805,897 JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:17186944)
GO_REF:0000033
(PMID:16825483), (PMID:17657314)
MGI:2676312 (PMID:23931754)
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:16825483 PMID:17186944 PMID:17657314 PMID:23931754 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,041,967...95,047,358 JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:16825483)
(PMID:16141411), (PMID:17186944), (PMID:19481530)
UniProt
GO_Central
Ensembl
RGD
PMID:16141411 PMID:16825483 PMID:17186944 PMID:19481530 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:97,614,616...97,632,053 JBrowse link
G Pltp phospholipid transfer protein involved_in ISO (PMID:24369175) RGD PMID:24369175 NCBI chr 3:153,574,825...153,592,647 JBrowse link
G Pon1 paraoxonase 1 involved_in ISO
IEA
(PMID:15721011)
GO_REF:0000107
RGD
Ensembl
PMID:15721011 GO_REF:0000107 NCBI chr 4:34,261,312...34,292,327 JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of
involved_in
ISO (PMID:24751522)
(PMID:16530456)
RGD PMID:16530456 PMID:24751522 NCBI chr 4:150,095,743...150,221,104 JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:21931618) RGD PMID:21931618 NCBI chr17:1,548,449...1,613,461 JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17936707)
Ensembl
RGD
PMID:17936707 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31902528) RGD PMID:31902528 NCBI chr 9:12,647,605...12,654,190 JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO
IBA
(PMID:19556522)
GO_REF:0000033
RGD
GO_Central
PMID:19556522 GO_REF:0000033 NCBI chr11:82,755,110...82,769,280 JBrowse link
positive regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5315712 (PMID:26965651) RGD PMID:26965651 NCBI chr14:101,081,667...101,185,738 JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:22454363 RGD:13800524 NCBI chr 7:65,265,639...65,346,196 JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:16772292 RGD:9850270 NCBI chr 5:128,035,714...128,110,015 JBrowse link
G Washc1 WASH complex subunit 1 acts_upstream_of_or_within ISO (PMID:26965651) RGD PMID:26965651 NCBI chr 9:105,722,779...105,830,836 JBrowse link
positive regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (PMID:33478937) RGD PMID:33478937 NCBI chr14:83,873,397...84,376,138 JBrowse link
G Abcb4 ATP binding cassette subfamily B member 4 involved_in ISO
IEA
ISS
(PMID:17523162), (PMID:24045840)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17523162 PMID:24045840 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,106,895...26,164,440 JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:68,514,923...68,536,105 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO GO_REF:0000114 ComplexPortal GO_REF:0000114 NCBI chr 7:65,265,639...65,346,196 JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 1:95,041,967...95,047,358 JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 3:97,614,616...97,632,053 JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of ISO (PMID:17611579) RGD PMID:17611579 NCBI chr 4:150,095,743...150,221,104 JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:16530456) RGD PMID:16530456 NCBI chr 4:150,095,743...150,221,104 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:15449949) RGD PMID:15449949 NCBI chr 5:128,035,714...128,110,015 JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07018244.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Anxa2 annexin A2 involved_in ISO
IEA
IBA
(PMID:22848640)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:22848640 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO
IEA
(PMID:12417523), (PMID:12464675), (PMID:15166224)
GO_REF:0000107
RGD
Ensembl
PMID:12417523 PMID:12464675 PMID:15166224 GO_REF:0000107 NCBI chr 5:152,239,296...152,262,290 JBrowse link
positive regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:32687853)
UniProt
RGD
PMID:32687853 GO_REF:0000024 NCBI chr10:95,739,610...95,808,633 JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in ISO
IBA
IEA
(PMID:6299582)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:6299582 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO
IEA
(PMID:12417523), (PMID:12464675), (PMID:15166224)
GO_REF:0000107
RGD
Ensembl
PMID:12417523 PMID:12464675 PMID:15166224 GO_REF:0000107 NCBI chr 5:152,239,296...152,262,290 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:4123883 (PMID:18948618) RGD PMID:18948618 NCBI chr 4:167,269,856...167,400,364 JBrowse link
regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:32687853)
(PMID:25125465)
UniProt
RGD
PMID:25125465 PMID:32687853 GO_REF:0000024 NCBI chr10:95,739,610...95,808,633 JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:28882873) RGD PMID:28882873 NCBI chr10:95,416,984...95,490,647 JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20544018)
UniProt
RGD
PMID:20544018 GO_REF:0000024 NCBI chr 1:165,684,001...165,689,698 JBrowse link
G Lamtor1l1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:34,637,460...34,638,509 JBrowse link
G Naxe NAD(P)HX epimerase involved_in ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:173,518,971...173,521,036 JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:27383786)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:27383786 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:97,603,329...97,708,103 JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:14,802,753...14,811,516 JBrowse link
regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO
ISS
(PMID:20544018)
GO_REF:0000024
RGD
UniProt
PMID:20544018 GO_REF:0000024 NCBI chr 1:165,684,001...165,689,698 JBrowse link
G Lamtor1l1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:34,637,460...34,638,509 JBrowse link
regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in ISO
IEA
(PMID:11940599)
GO_REF:0000107
RGD
Ensembl
PMID:11940599 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160 JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3700008 (PMID:21147780)
Ensembl
RGD
PMID:21147780 GO_REF:0000107 NCBI chr 1:143,757,389...143,770,430 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:19718435) RGD PMID:19718435 NCBI chr 7:65,265,639...65,346,196 JBrowse link
G Osbpl6 oxysterol binding protein-like 6 involved_in ISO (PMID:26941018) RGD PMID:26941018 NCBI chr 3:61,343,776...61,541,170 JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component acts_upstream_of_or_within ISO (PMID:23580231) RGD PMID:23580231 NCBI chr10:35,946,901...36,024,353 JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:22748276)
(PMID:15238223)
UniProt
RGD
PMID:15238223 PMID:22748276 GO_REF:0000024 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:52,692,337...52,704,156 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO UniProtKB:P61916 (PMID:19723497) RGD PMID:19723497 NCBI chr20:31,811,817...31,838,562 JBrowse link
G Tmem97 transmembrane protein 97 involved_in ISS
ISO
GO_REF:0000024
(PMID:27378690)
UniProt
RGD
PMID:27378690 GO_REF:0000024 NCBI chr10:63,936,276...63,945,359 JBrowse link
reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236)
(PMID:17657311)
RGD PMID:10431236 PMID:17657311 NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17657311) RGD PMID:17657311 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA
(PMID:15464323)
GO_REF:0000107
RGD
Ensembl
PMID:15464323 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:83,644,460...83,646,358 JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA
(PMID:3095477)
GO_REF:0000107
RGD
Ensembl
PMID:3095477 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160 JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:8127890)
Ensembl
RGD
PMID:8127890 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Apom apolipoprotein M acts_upstream_of_or_within ISO (PMID:15793583) RGD PMID:15793583 NCBI chr20:3,690,950...3,693,550 JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18599737), (PMID:18762277) RGD PMID:18599737 PMID:18762277 NCBI chr19:30,046,494...30,085,039 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (PMID:15793583) RGD PMID:15793583 NCBI chr12:47,299,171...47,333,457 JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO
IEA
(PMID:4335615)
GO_REF:0000107
RGD
Ensembl
PMID:4335615 GO_REF:0000107 NCBI chr19:33,834,748...33,838,214 JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:68,514,923...68,536,105 JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IEA
ISS
(PMID:9211901)
(PMID:19136670)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:9211901 PMID:19136670 GO_REF:0000024 GO_REF:0000107 NCBI chr12:36,957,302...37,023,982 JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028769.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29353240)
UniProt
Ensembl
RGD
PMID:29353240 GO_REF:0000024 GO_REF:0000107 NCBI chr17:86,405,080...86,576,597 JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024 NCBI chr 1:207,031,359...207,093,787 JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:28658628) RGD PMID:28658628 NCBI chr 1:203,360,434...203,370,422 JBrowse link
G Vps52 VPS52 subunit of GARP complex involved_in ISO (PMID:28658628) RGD PMID:28658628 NCBI chr20:4,920,715...4,931,685 JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in ISO (PMID:28658628) RGD PMID:28658628 NCBI chr10:61,418,076...61,536,912 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO
GO_REF:0000107
MGI:1857091 (PMID:28658628)
Ensembl
RGD
PMID:28658628 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    localization 5703
      establishment of localization 5046
        transport 4737
          lipid transport 490
            sterol transport 134
              cholesterol transport 129
                cholesterol efflux + 72
                cholesterol import + 18
                cholesterol transport involved in cholesterol storage 1
                intracellular cholesterol transport + 38
                low-density lipoprotein particle disassembly involved in cholesterol transport 0
                negative regulation of cholesterol transport + 30
                positive regulation of cholesterol transport + 36
                regulation of cholesterol transport + 75
                reverse cholesterol transport + 14
paths to the root