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ONTOLOGY REPORT - ANNOTATIONS


Term:cholesterol transport
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Accession:GO:0030301 term browser browse the term
Definition:The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.



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cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 IDA
IMP
RGD PMID:12909583 PMID:14993246 RGD:1304419, RGD:1358264 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 acts_upstream_of_or_within TAS
ISO
(MGI:3512871|PMID:15319426) RGD PMID:15319426 PMID:11590207 MGI:3512871, RGD:634620 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within IDA
ISO
(PMID:10559507)
MGI:1857127|MGI:2180783 (MGI:1096057|PMID:9300780), (MGI:1196678|PMID:9507992), (MGI:3706653|PMID:9684752)
RGD PMID:9300780 PMID:9507992 PMID:9684752 PMID:10559507 PMID:11773045 More... MGI:1096057 MGI:1196678 MGI:3706653, RGD:1298673, RGD:1626399 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:1537840 PMID:21873635 RGD:1626399, RGD:13792537 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:2563166)
MGI:2157090 (MGI:77225|PMID:7593600)
PMID:21873635
RGD PMID:2563166 PMID:7593600 PMID:21873635 MGI:77225, RGD:13792537 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:52,692,337...52,704,156
Ensembl chr19:52,692,337...52,704,156
JBrowse link
G Cd36 CD36 molecule involved_in ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 NOT|acts_upstream_of_or_within ISO (MGI:2451215|PMID:12496272) RGD PMID:12496272 MGI:2451215 NCBI chr 7:107,285,584...107,288,702
Ensembl chr 7:107,285,654...107,288,702
JBrowse link
G Lcat lecithin cholesterol acyltransferase acts_upstream_of_or_within ISO (PMID:10559507) RGD PMID:10559507 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231
JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within
ISO (PMID:17142622)
MGI:1857212 (MGI:3706212|PMID:17148552)
RGD PMID:17142622 PMID:17148552 MGI:3706212 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857182 (MGI:82594|PMID:8798380)
Ensembl
RGD
PMID:8798380 GO_REF:0000107 MGI:82594 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr16:52,717,775...52,802,890
Ensembl chr16:52,717,732...52,799,676
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:18772377) RGD PMID:18772377 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO (PMID:17018531), (PMID:18772377)
(MGI:5465528|PMID:21315718)
RGD PMID:17018531 PMID:18772377 PMID:21315718 MGI:5465528 NCBI chr 6:104,397,239...104,418,161
Ensembl chr 6:104,378,644...104,418,155
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:167,210,945...167,256,219
Ensembl chr 3:167,210,832...167,256,219
JBrowse link
G Pdzk1 PDZ domain containing 1 NAS RGD PMID:10829064 RGD:70627 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514
JBrowse link
G Scarb1 scavenger receptor class B, member 1 acts_upstream_of_or_within ISO MGI:1928989 (MGI:3037533|PMID:14729860), (MGI:3690692|PMID:10559220), (MGI:82596|PMID:8753864) RGD PMID:8753864 PMID:10559220 PMID:14729860 MGI:3037533 MGI:3690692 MGI:82596 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Stard3 StAR-related lipid transfer domain containing 3 involved_in ISO (PMID:28377464) RGD PMID:28377464 NCBI chr10:83,357,329...83,379,873
Ensembl chr10:83,357,359...83,550,976
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (MGI:1353213|PMID:10637304) RGD PMID:10637304 MGI:1353213 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
JBrowse link
cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within
involved_in
ISO MGI:1935192|MGI:3613250 (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:3513719|PMID:15520449), (MGI:3706212|PMID:17148552)
UniProtKB:P02647|UniProtKB:P02649 (PMID:10431236), (PMID:11162594), (PMID:16443932), (PMID:16702602), (PMID:19556522), (PMID:23931754), (PMID:25084135), (PMID:28373057)
(MGI:5427333|PMID:22179027)
RGD PMID:10431236 PMID:11162594 PMID:12869555 PMID:15269218 PMID:15520449 More... MGI:2675932 MGI:3056863 MGI:3513719 MGI:3706212 MGI:5427333 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:4454250|PMID:20382126)
Ensembl
RGD
PMID:20382126 GO_REF:0000107 MGI:4454250 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO
IEA
IBA
ISS
(PMID:14570867)
(MGI:6271506|PMID:27472885)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
Alzheimers_University_of_Toronto
UniProt
PMID:14570867 PMID:27472885 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:6271506, RGD:13792537 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO
IBA
(PMID:15994327), (PMID:16702602), (PMID:24576892)
PMID:21873635
(MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393)
RGD PMID:15994327 PMID:16556852 PMID:16702602 PMID:21481393 PMID:24576892 More... MGI:3852307 MGI:5634884, RGD:13792537 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 NOT|involved_in ISO
IBA
ISS
(MGI:3852307|PMID:16556852)
PMID:21873635
(MGI:3047008|PMID:15210959), (MGI:3818784|PMID:18039927)
(PMID:33141061)
GO_REF:0000024
RGD
UniProt
PMID:15210959 PMID:16556852 PMID:18039927 PMID:33141061 PMID:21873635 GO_REF:0000024 MGI:3047008 MGI:3818784 MGI:3852307, RGD:13792537 NCBI chr 8:44,611,187...44,629,818
Ensembl chr 8:44,611,187...44,626,881
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO
ISS
UniProtKB:Q99PE8 (PMID:14504269), (PMID:27144356)
(MGI:2681374|PMID:14504269)
GO_REF:0000024
RGD
UniProt
PMID:14504269 PMID:27144356 GO_REF:0000024 MGI:2681374 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO UniProtKB:Q9DBM0|UniProtKB:Q9H222 (PMID:14504269), (PMID:27144356)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 PMID:27144356 MGI:2681374 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912
JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2180783 (MGI:1096304|PMID:9275209), (MGI:2176648|PMID:11744719), (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:892202|PMID:9186920)
(PMID:11162594), (PMID:12202492), (PMID:14703508), (PMID:15358760), (PMID:16443932), (PMID:21481393)
RGD PMID:9186920 PMID:9275209 PMID:11162594 PMID:11744719 PMID:12202492 More... MGI:1096304 MGI:2176648 MGI:2675932 MGI:3056863 MGI:892202, RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA
IBA
(PMID:11162594), (PMID:1935934)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:1935934 PMID:11162594 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO MGI:104539 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO
IEA
(PMID:11162594), (PMID:16443932)
GO_REF:0000107
RGD
Ensembl
PMID:11162594 PMID:16443932 GO_REF:0000107 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2137814 (MGI:2151732|PMID:11551841), (MGI:3056863|PMID:15269218)
(PMID:11162594), (PMID:16443932), (PMID:23620513)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11162594 PMID:11551841 PMID:15269218 PMID:16443932 PMID:23620513 GO_REF:0000024 GO_REF:0000107 MGI:2151732 MGI:3056863 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Apof apolipoprotein F acts_upstream_of_or_within ISO MGI:88052 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 7:700,688...702,130
Ensembl chr 7:700,762...701,946
JBrowse link
G Apom apolipoprotein M involved_in ISO
IBA
(PMID:15793583), (PMID:16682745)
(MGI:3575626|PMID:15793583)
PMID:21873635
RGD PMID:15793583 PMID:16682745 PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550
JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:17499231 RGD:2289119 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16141411)
MGI:1857409 (MGI:3706212|PMID:17148552)
RGD PMID:16141411 PMID:17148552 MGI:3706212 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO
IBA
(PMID:16141411)
(MGI:5465528|PMID:21315718)
PMID:21873635
RGD PMID:16141411 PMID:21315718 PMID:21873635 MGI:5465528, RGD:13792537 NCBI chr 6:104,397,239...104,418,161
Ensembl chr 6:104,378,644...104,418,155
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IBA
(PMID:12202492)
(MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
PMID:21873635
RGD PMID:12202492 PMID:14718538 PMID:21481393 PMID:21873635 MGI:3843437 MGI:5634884, RGD:13792537 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:15308631)
Ensembl
RGD
PMID:15308631 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494
JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in ISO
IEA
IBA
(PMID:15308631)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15308631 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915
JBrowse link
G Stx12 syntaxin 12 involved_in ISO
IEA
(PMID:15469992)
GO_REF:0000107
RGD
Ensembl
PMID:15469992 GO_REF:0000107 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6407480|PMID:31391339)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31391339 GO_REF:0000024 GO_REF:0000107 MGI:6407480 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:14718538) RGD PMID:14718538 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024 MGI:3718873 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:3784112|PMID:18175806)
(PMID:6299582)
Ensembl
RGD
PMID:6299582 PMID:18175806 GO_REF:0000107 MGI:3784112 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IBA
ISO
PMID:21873635
(MGI:3784112|PMID:18175806), (MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
(PMID:11208913), (PMID:26965621)
RGD PMID:11208913 PMID:14718538 PMID:18175806 PMID:21481393 PMID:26965621 More... MGI:3784112 MGI:3843437 MGI:5634884, RGD:13792537 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:18403318)
RGD PMID:18403318 PMID:21873635 RGD:13792537 NCBI chr18:24,814,683...24,830,024
Ensembl chr18:24,817,107...24,830,024
JBrowse link
G Stard5 StAR-related lipid transfer domain containing 5 involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr 1:137,606,151...137,616,017
Ensembl chr 1:137,606,177...137,616,469
JBrowse link
cholesterol transport involved in cholesterol storage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318 PMID:21873635 RGD:13792537 NCBI chr18:24,814,683...24,830,024
Ensembl chr18:24,817,107...24,830,024
JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(PMID:21802320)
UniProt
RGD
PMID:21802320 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO
IEA
(MGI:5691857|PMID:25144390)
GO_REF:0000107
RGD
Ensembl
PMID:25144390 GO_REF:0000107 MGI:5691857 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024 MGI:3718873 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:17142622)
GO_REF:0000107
RGD
Ensembl
PMID:17142622 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in ISO (MGI:6160379|PMID:29880681) RGD PMID:29880681 MGI:6160379 NCBI chr 7:130,901,717...131,001,573
Ensembl chr 7:130,901,717...131,001,473
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
JBrowse link
G Pnlip pancreatic lipase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2681122 (MGI:2679793|PMID:12915407)
Ensembl
RGD
PMID:12915407 GO_REF:0000107 MGI:2679793 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654
JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236) RGD PMID:10431236 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:27238017), (PMID:28784760), (PMID:9211849) RGD PMID:9211849 PMID:27238017 PMID:28784760 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q96E22 (PMID:19723497)
(PMID:15937921), (PMID:17018531), (PMID:18823126), (PMID:27238017)
(MGI:3763329|PMID:17018531)
RGD PMID:15937921 PMID:17018531 PMID:18823126 PMID:19723497 PMID:27238017 More... MGI:3763329, RGD:13792537 NCBI chr 6:104,397,239...104,418,161
Ensembl chr 6:104,378,644...104,418,155
JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:29514919) RGD PMID:29514919 NCBI chr 1:208,888,697...208,918,511
Ensembl chr 1:208,887,895...208,918,506
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO
IEA
(PMID:30581148)
GO_REF:0000107
RGD
Ensembl
PMID:30581148 GO_REF:0000107 NCBI chr 3:167,210,945...167,256,219
Ensembl chr 3:167,210,832...167,256,219
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing involved_in ISO (PMID:29514919) RGD PMID:29514919 NCBI chr13:21,806,972...21,902,807
Ensembl chr13:21,806,972...21,902,807
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO
ISS
(PMID:7642518)
GO_REF:0000024
RGD
UniProt
PMID:7642518 GO_REF:0000024 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287
JBrowse link
G Serac1 serine active site containing 1 involved_in ISO (PMID:22683713) RGD PMID:22683713 NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727
JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:14617579 PMID:21873635 RGD:4145640, RGD:13792537 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:18403318)
RGD PMID:18403318 PMID:21873635 RGD:13792537 NCBI chr18:24,814,683...24,830,024
Ensembl chr18:24,817,107...24,830,024
JBrowse link
G Tspo2 translocator protein 2 involved_in ISO (PMID:32358067)
(MGI:6450299|PMID:32358067)
RGD PMID:32358067 MGI:6450299 NCBI chr 9:12,544,615...12,548,563
Ensembl chr 9:12,545,015...12,548,573
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:10637304) RGD PMID:10637304 NCBI chr19:34,934,999...34,948,267
Ensembl chr19:34,934,961...34,948,887
JBrowse link
negative regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:12042316) RGD PMID:12042316 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4460848|PMID:20037141) RGD PMID:20037141 MGI:4460848 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IEA
ISO
GO_REF:0000107
(MGI:5051938|PMID:20844270)
Ensembl
RGD
PMID:20844270 GO_REF:0000107 MGI:5051938 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:5306540|PMID:21931618)
Ensembl
RGD
PMID:21931618 GO_REF:0000107 MGI:5306540 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
negative regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO
IEA
(PMID:15778093)
GO_REF:0000107
RGD
Ensembl
PMID:15778093 GO_REF:0000107 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
negative regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:8636092) RGD PMID:8636092 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoc1 apolipoprotein C1 involved_in IBA
ISO
PMID:21873635
(PMID:10978346)
RGD PMID:10978346 PMID:21873635 RGD:13792537 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:15778093) RGD PMID:15778093 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476
JBrowse link
G LOC100910181 apolipoprotein C-I-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
JBrowse link
positive regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 involved_in
acts_upstream_of_or_within
ISO (PMID:23931754)
MGI:1352463|MGI:4461044 (MGI:5510615|PMID:23931754)
RGD PMID:23931754 MGI:5510615 NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
JBrowse link
G Abca3 ATP binding cassette subfamily A member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25817392)
UniProt
RGD
PMID:25817392 GO_REF:0000024 NCBI chr10:13,382,439...13,439,748
Ensembl chr10:13,382,540...13,439,745
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5553242|PMID:18429932)
Alzheimers_University_of_Toronto
RGD
PMID:18429932 GO_REF:0000024 MGI:5553242 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO
GO_REF:0000024
(PMID:18703020)
UniProt
RGD
PMID:18703020 GO_REF:0000024 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
ISS
(PMID:27472885)
GO_REF:0000024
RGD
UniProt
PMID:27472885 GO_REF:0000024 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(MGI:6448697|PMID:31902528)
UniProtKB:P08226 (PMID:12042316), (PMID:12401887), (PMID:14754908)
Ensembl
RGD
PMID:12042316 PMID:12401887 PMID:14754908 PMID:31902528 GO_REF:0000107 MGI:6448697 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:24576892)
GO_REF:0000107
RGD
Ensembl
PMID:24576892 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16971496), (PMID:18599737), (PMID:18762277) RGD PMID:16971496 PMID:18599737 PMID:18762277 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in ISO (PMID:28082258)
(MGI:6162611|PMID:28082258)
RGD PMID:28082258 MGI:6162611 NCBI chr 8:23,957,258...24,064,343
Ensembl chr 8:23,957,255...24,064,340
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:19481530) RGD PMID:19481530 NCBI chr10:54,637,360...54,640,542
Ensembl chr10:54,637,455...54,640,650
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:16938301) RGD PMID:16938301 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17186944)
(MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483)
MGI:2676312 (MGI:5510615|PMID:23931754)
RGD PMID:16825483 PMID:17186944 PMID:17657314 PMID:23931754 MGI:3720271 MGI:3794353 MGI:5510615 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3794353|PMID:16825483)
(PMID:16141411), (PMID:17186944), (PMID:19481530)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16141411 PMID:16825483 PMID:17186944 PMID:19481530 GO_REF:0000024 GO_REF:0000107 MGI:3794353 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Pltp phospholipid transfer protein involved_in ISO (PMID:24369175) RGD PMID:24369175 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647
JBrowse link
G Pon1 paraoxonase 1 involved_in ISO (PMID:15721011) RGD PMID:15721011 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:24751522) RGD PMID:24751522 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:21931618) RGD PMID:21931618 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3790014|PMID:17936707) RGD PMID:17936707 MGI:3790014 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6448697|PMID:31902528) RGD PMID:31902528 MGI:6448697 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:19556522) RGD PMID:19556522 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734
JBrowse link
positive regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5315712 (MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:5806548 NCBI chr14:96,880,463...96,984,494
Ensembl chr14:96,880,463...96,984,501
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:22454363 RGD:13800524 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:16772292 RGD:9850270 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287
JBrowse link
G Washc1 WASH complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5806548|PMID:26965651)
Ensembl
RGD
PMID:26965651 GO_REF:0000107 MGI:5806548 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
positive regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937)
(PMID:33478937)
RGD PMID:33478937 MGI:6694370 NCBI chr14:83,873,397...84,376,138
Ensembl chr14:83,873,940...84,375,075
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Abcb4 ATP binding cassette subfamily B member 4 involved_in ISO
IEA
ISS
(PMID:17523162), (PMID:24045840)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17523162 PMID:24045840 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:25,150,998...25,209,489
Ensembl chr 4:25,151,953...25,209,202
JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in ISO (MGI:5302163|PMID:22045928) RGD PMID:22045928 MGI:5302163 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (MGI:3588413|PMID:12393855) RGD PMID:12393855 MGI:3588413 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5574251|PMID:24650549)
UniProt
RGD
PMID:24650549 GO_REF:0000024 MGI:5574251 NCBI chr10:104,242,223...104,246,589
Ensembl chr10:104,242,223...104,246,589
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5780634|PMID:26833026)
UniProt
RGD
PMID:26833026 GO_REF:0000024 MGI:5780634 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 involved_in IBA
ISO
PMID:21873635
(PMID:15449949)
RGD PMID:15449949 PMID:21873635 RGD:13792537 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:132,201,979...132,202,729
Ensembl chr 3:132,200,744...132,212,725
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:5446858 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601
JBrowse link
positive regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6508518|PMID:32687853)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:32687853 GO_REF:0000024 GO_REF:0000107 MGI:6508518 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:6299582)
GO_REF:0000107
RGD
Ensembl
PMID:6299582 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4123883 (MGI:4413421|PMID:18948618)
RGD PMID:18948618 PMID:21873635 MGI:4413421, RGD:13792537 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6508518|PMID:32687853)
GO_REF:0000107
(PMID:25125465)
UniProt
RGD
Ensembl
PMID:25125465 PMID:32687853 GO_REF:0000024 GO_REF:0000107 MGI:6508518 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:28882873) RGD PMID:28882873 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20544018)
UniProt
RGD
PMID:20544018 GO_REF:0000024 NCBI chr 1:156,272,116...156,277,687
Ensembl chr 1:156,272,064...156,291,179
JBrowse link
G LOC100361543 RhoA activator C11orf59-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:34,637,461...34,638,516 JBrowse link
G Naxe NAD(P)HX epimerase involved_in ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:173,518,966...173,521,048
Ensembl chr 2:173,518,971...173,521,040
JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5800596|PMID:27383786)
GO_REF:0000024
RGD
UniProt
PMID:27383786 PMID:21873635 GO_REF:0000024 MGI:5800596, RGD:13792537 NCBI chr 5:97,603,329...97,708,103
Ensembl chr 5:97,609,392...97,736,270
JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:14,802,753...14,811,516
Ensembl chr 6:14,786,089...14,811,978
JBrowse link
regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO
ISS
(PMID:20544018)
GO_REF:0000024
RGD
UniProt
PMID:20544018 GO_REF:0000024 NCBI chr 1:156,272,116...156,277,687
Ensembl chr 1:156,272,064...156,291,179
JBrowse link
G LOC100361543 RhoA activator C11orf59-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:34,637,461...34,638,516 JBrowse link
regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in IEA
ISO
GO_REF:0000107
(PMID:11940599)
Ensembl
RGD
PMID:11940599 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3700008 (MGI:4941098|PMID:21147780)
Ensembl
RGD
PMID:21147780 GO_REF:0000107 MGI:4941098 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Osbpl6 oxysterol binding protein-like 6 involved_in ISO (PMID:26941018) RGD PMID:26941018 NCBI chr 3:61,343,776...61,541,170
Ensembl chr 3:61,343,809...61,537,102
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component acts_upstream_of_or_within ISO (MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:5496780 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353
JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1339009|PMID:10073953)
RGD PMID:10073953 PMID:21873635 MGI:1339009, RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 acts_upstream_of_or_within ISO MGI:2157148 (MGI:84652|PMID:8962133) RGD PMID:8962133 MGI:84652 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoa4 apolipoprotein A4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2157162 (MGI:1096980|PMID:9323588)
RGD PMID:9323588 PMID:21873635 MGI:1096980, RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (MGI:2386518|PMID:12114517) RGD PMID:12114517 MGI:2386518 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6478054|PMID:22748276)
(PMID:15238223)
UniProt
RGD
PMID:15238223 PMID:22748276 GO_REF:0000024 MGI:6478054 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:52,692,337...52,704,156
Ensembl chr19:52,692,337...52,704,156
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO (MGI:4358633|PMID:19723497)
UniProtKB:P61916 (PMID:19723497)
RGD PMID:19723497 MGI:4358633 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
JBrowse link
reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236)
(MGI:3720273|PMID:17657311)
RGD PMID:10431236 PMID:17657311 MGI:3720273 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3720273|PMID:17657311) RGD PMID:17657311 MGI:3720273 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948
JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IBA
(PMID:15464323)
PMID:21873635
RGD PMID:15464323 PMID:21873635 RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:3095477)
Ensembl
RGD
PMID:3095477 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:8127890)
Ensembl
RGD
PMID:8127890 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Apom apolipoprotein M acts_upstream_of_or_within ISO (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18599737), (PMID:18762277) RGD PMID:18599737 PMID:18762277 NCBI chr19:13,873,490...13,912,035 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO (PMID:4335615) RGD PMID:4335615 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231
JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
ISS
(PMID:9211901)
(MGI:3842875|PMID:19136670)
GO_REF:0000024
RGD
BHF-UCL
PMID:9211901 PMID:19136670 GO_REF:0000024 MGI:3842875 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:29353240)
UniProt
RGD
PMID:29353240 GO_REF:0000024 NCBI chr17:81,496,669...81,668,180 JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645834|PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024 MGI:5645834 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    localization 6437
      macromolecule localization 3001
        lipid localization 458
          lipid transport 406
            sterol transport 121
              cholesterol transport 107
                cholesterol efflux + 55
                cholesterol import + 14
                cholesterol transport involved in cholesterol storage 1
                intestinal cholesterol absorption + 16
                intracellular cholesterol transport + 27
                low-density lipoprotein particle disassembly involved in cholesterol transport 0
                negative regulation of cholesterol transport + 15
                positive regulation of cholesterol transport + 40
                regulation of cholesterol transport + 67
                reverse cholesterol transport + 13
Path 2
Term Annotations click to browse term
  biological_process 19390
    localization 6437
      establishment of localization 4853
        transport 4689
          organic substance transport 2476
            lipid transport 406
              sterol transport 121
                cholesterol transport 107
                  cholesterol efflux + 55
                  cholesterol import + 14
                  cholesterol transport involved in cholesterol storage 1
                  intestinal cholesterol absorption + 16
                  intracellular cholesterol transport + 27
                  low-density lipoprotein particle disassembly involved in cholesterol transport 0
                  negative regulation of cholesterol transport + 15
                  positive regulation of cholesterol transport + 40
                  regulation of cholesterol transport + 67
                  reverse cholesterol transport + 13
paths to the root