Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cholesterol transport
go back to main search page
Accession:GO:0030301 term browser browse the term
Definition:The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


show annotations for term's descendants           Sort by:
 
cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 IDA
IMP
RGD PMID:12909583, PMID:14993246 RGD:1304419, RGD:1358264 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 TAS
ISO
(MGI:3512871|PMID:15319426) RGD PMID:15319426, PMID:11590207 MGI:3512871, RGD:634620 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa1 apolipoprotein A1 IDA
ISO
MGI:1857127|MGI:2180783 (MGI:1096057|PMID:9300780), (MGI:1196678|PMID:9507992), (MGI:3706653|PMID:9684752)
(PMID:10559507)
RGD PMID:9300780, PMID:9507992, PMID:9684752, PMID:10559507, PMID:11773045, PMID:1537840 MGI:1096057, MGI:1196678, MGI:3706653, RGD:1298673, RGD:1626399 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:1537840, PMID:21873635 RGD:1626399, RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apob apolipoprotein B ISO
IBA
(PMID:2563166)
MGI:2157090 (MGI:77225|PMID:7593600)
PMID:21873635
RGD PMID:2563166, PMID:7593600, PMID:21873635 MGI:77225, RGD:13792537 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Cd36 CD36 molecule ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cftr CF transmembrane conductance regulator IEA
ISO
GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107, MGI:3709533 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 NOT ISO (MGI:2451215|PMID:12496272) RGD PMID:12496272 MGI:2451215 NCBI chr 7:116,632,496...116,635,543
Ensembl chr 7:116,632,506...116,634,293
JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO (PMID:10559507) RGD PMID:10559507 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Ldlr low density lipoprotein receptor ISO (PMID:17142622)
MGI:1857212 (MGI:3706212|PMID:17148552)
RGD PMID:17142622, PMID:17148552 MGI:3706212 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lipc lipase C, hepatic type IEA
ISO
GO_REF:0000107
MGI:1857182 (MGI:82594|PMID:8798380)
Ensembl
RGD
PMID:8798380 GO_REF:0000107, MGI:82594 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Msr1 macrophage scavenger receptor 1 ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr16:56,817,714...56,900,025
Ensembl chr16:56,813,791...56,900,052
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:18772377) RGD PMID:18772377 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO (PMID:17018531), (PMID:18772377)
(MGI:5465528|PMID:21315718)
RGD PMID:17018531, PMID:18772377, PMID:21315718 MGI:5465528 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:175,493,650...175,538,965
Ensembl chr 3:175,493,698...175,538,963
JBrowse link
G Pdzk1 PDZ domain containing 1 NAS RGD PMID:10829064 RGD:70627 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO MGI:1928989 (MGI:3037533|PMID:14729860), (MGI:3690692|PMID:10559220), (MGI:82596|PMID:8753864) RGD PMID:8753864, PMID:10559220, PMID:14729860 MGI:3037533, MGI:3690692, MGI:82596 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Stard3 StAR-related lipid transfer domain containing 3 ISO (PMID:28377464) RGD PMID:28377464 NCBI chr10:86,313,430...86,335,868
Ensembl chr10:86,313,383...86,335,923
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (MGI:1353213|PMID:10637304) RGD PMID:10637304 MGI:1353213 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO UniProtKB:P02647|UniProtKB:P02649 (PMID:10431236), (PMID:11162594), (PMID:16443932), (PMID:16702602), (PMID:19556522), (PMID:23931754), (PMID:28373057)
MGI:1935192|MGI:3613250 (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:3513719|PMID:15520449), (MGI:3706212|PMID:17148552), (MGI:5427333|PMID:22179027)
RGD PMID:10431236, PMID:11162594, PMID:12869555, PMID:15269218, PMID:15520449, PMID:16443932, PMID:16702602, PMID:17148552, PMID:19556522, PMID:22179027, PMID:23931754, PMID:28373057 MGI:2675932, MGI:3056863, MGI:3513719, MGI:3706212, MGI:5427333 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 IEA
ISO
GO_REF:0000107
(MGI:4454250|PMID:20382126)
Ensembl
RGD
PMID:20382126 GO_REF:0000107, MGI:4454250 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO
IEA
ISS
IBA
(PMID:14570867)
(MGI:6271506|PMID:27472885)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
Alzheimers_University_of_Toronto
PMID:14570867, PMID:27472885, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:6271506, RGD:13792537 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO
IBA
(PMID:15994327), (PMID:16702602), (PMID:24576892)
(MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393)
PMID:21873635
RGD PMID:15994327, PMID:16556852, PMID:16702602, PMID:21481393, PMID:24576892, PMID:21873635 MGI:3852307, MGI:5634884, RGD:13792537 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 NOT IBA
ISO
PMID:21873635
(MGI:3852307|PMID:16556852)
RGD PMID:16556852, PMID:21873635 MGI:3852307, RGD:13792537 NCBI chr 8:48,604,915...48,626,219
Ensembl chr 8:48,606,403...48,619,592
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 ISS
ISO
GO_REF:0000024
(MGI:2681374|PMID:14504269)
UniProtKB:Q99PE8 (PMID:14504269), (PMID:27144356)
UniProt
RGD
PMID:14504269, PMID:27144356 GO_REF:0000024, MGI:2681374 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO UniProtKB:Q9DBM0|UniProtKB:Q9H222 (PMID:14504269), (PMID:27144356)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269, PMID:27144356 MGI:2681374 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
G Apoa1 apolipoprotein A1 ISO
IBA
(PMID:11162594), (PMID:12202492), (PMID:14703508), (PMID:15358760), (PMID:16443932), (PMID:21481393)
MGI:2180783 (MGI:1096304|PMID:9275209), (MGI:2176648|PMID:11744719), (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:892202|PMID:9186920)
PMID:21873635
RGD PMID:9186920, PMID:9275209, PMID:11162594, PMID:11744719, PMID:12202492, PMID:12869555, PMID:14703508, PMID:15269218, PMID:15358760, PMID:16443932, PMID:21481393, PMID:21873635 MGI:1096304, MGI:2176648, MGI:2675932, MGI:3056863, MGI:892202, RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:11162594) RGD PMID:11162594 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11162594), (PMID:1935934)
Ensembl
RGD
PMID:1935934, PMID:11162594, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apob apolipoprotein B ISO MGI:104539 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoc1 apolipoprotein C1 ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoc3 apolipoprotein C3 IEA
ISO
GO_REF:0000107
(PMID:11162594), (PMID:16443932)
Ensembl
RGD
PMID:11162594, PMID:16443932 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Apoe apolipoprotein E IEA
ISO
ISS
GO_REF:0000107
MGI:2137814 (MGI:2151732|PMID:11551841), (MGI:3056863|PMID:15269218)
(PMID:11162594), (PMID:16443932), (PMID:23620513)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11162594, PMID:11551841, PMID:15269218, PMID:16443932, PMID:23620513 GO_REF:0000024, GO_REF:0000107, MGI:2151732, MGI:3056863 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apof apolipoprotein F ISO MGI:88052 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 7:2,689,501...2,690,938
Ensembl chr 7:2,689,501...2,690,936
JBrowse link
G Apom apolipoprotein M ISO
IBA
(PMID:15793583), (PMID:16682745)
(MGI:3575626|PMID:15793583)
PMID:21873635
RGD PMID:15793583, PMID:16682745, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:17499231 RGD:2289119 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:16141411)
MGI:1857409 (MGI:3706212|PMID:17148552)
RGD PMID:16141411, PMID:17148552 MGI:3706212 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO
IBA
(PMID:16141411)
(MGI:5465528|PMID:21315718)
PMID:21873635
RGD PMID:16141411, PMID:21315718, PMID:21873635 MGI:5465528, RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO (PMID:12202492)
(MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
RGD PMID:12202492, PMID:14718538, PMID:21481393 MGI:3843437, MGI:5634884 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO
IBA
IEA
(PMID:15308631)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15308631, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783
JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO
IBA
IEA
(PMID:15308631)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15308631, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:143,754,892...143,767,989
Ensembl chr 7:143,754,892...143,767,989
JBrowse link
G Stx12 syntaxin 12 ISO
IEA
(PMID:15469992)
GO_REF:0000107
RGD
Ensembl
PMID:15469992 GO_REF:0000107 NCBI chr 5:151,044,050...151,072,893
Ensembl chr 5:151,044,329...151,072,904
JBrowse link
cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 ISO (PMID:14718538) RGD PMID:14718538 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Cd36 CD36 molecule ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024, MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(MGI:3784112|PMID:18175806)
(PMID:6299582)
Ensembl
RGD
PMID:6299582, PMID:18175806 GO_REF:0000107, MGI:3784112 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO (PMID:11208913), (PMID:26965621)
(MGI:3784112|PMID:18175806), (MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
RGD PMID:11208913, PMID:14718538, PMID:18175806, PMID:21481393, PMID:26965621 MGI:3784112, MGI:3843437, MGI:5634884 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
G Stard5 StAR-related lipid transfer domain containing 5 ISO (PMID:18403318) RGD PMID:18403318 NCBI chr 1:145,770,135...145,780,001
Ensembl chr 1:145,770,135...145,780,001
JBrowse link
cholesterol transport involved in cholesterol storage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard4 StAR-related lipid transfer domain containing 4 ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024, MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor ISO
IEA
(PMID:17142622)
GO_REF:0000107
RGD
Ensembl
PMID:17142622 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lima1 LIM domain and actin binding 1 ISO (MGI:6160379|PMID:29880681) RGD PMID:29880681 MGI:6160379 NCBI chr 7:141,428,113...141,528,447
Ensembl chr 7:141,428,063...141,528,397
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Pnlip pancreatic lipase IEA
ISO
GO_REF:0000107
MGI:2681122 (MGI:2679793|PMID:12915407)
Ensembl
RGD
PMID:12915407 GO_REF:0000107, MGI:2679793 NCBI chr 1:279,798,187...279,811,372
Ensembl chr 1:279,798,187...279,811,372
JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236) RGD PMID:10431236 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:27238017), (PMID:28784760), (PMID:9211849) RGD PMID:9211849, PMID:27238017, PMID:28784760 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO
IBA
UniProtKB:Q96E22 (PMID:15937921), (PMID:17018531), (PMID:18823126), (PMID:19723497), (PMID:27238017)
(MGI:3763329|PMID:17018531)
PMID:21873635
RGD PMID:15937921, PMID:17018531, PMID:18823126, PMID:19723497, PMID:27238017, PMID:21873635 MGI:3763329, RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbp oxysterol binding protein ISO (PMID:29514919) RGD PMID:29514919 NCBI chr 1:228,395,237...228,425,366
Ensembl chr 1:228,395,558...228,425,361
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 ISO
IEA
(PMID:30581148)
GO_REF:0000107
RGD
Ensembl
PMID:30581148 GO_REF:0000107 NCBI chr 3:175,493,650...175,538,965
Ensembl chr 3:175,493,698...175,538,963
JBrowse link
G Rab11a RAB11a, member RAS oncogene family ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing ISO (PMID:29514919) RGD PMID:29514919 NCBI chr13:25,656,983...25,752,792
Ensembl chr13:25,656,983...25,752,792
JBrowse link
G Scp2 sterol carrier protein 2 ISO
ISS
(PMID:7642518)
GO_REF:0000024
RGD
UniProt
PMID:7642518 GO_REF:0000024 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Serac1 serine active site containing 1 ISO (PMID:22683713) RGD PMID:22683713 NCBI chr 1:46,934,499...46,978,264
Ensembl chr 1:46,942,192...46,978,261
JBrowse link
G Star steroidogenic acute regulatory protein IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:14617579, PMID:21873635 RGD:4145640, RGD:13792537 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
G Tspo2 translocator protein 2 ISO
IEA
(PMID:32358067)
(MGI:6450299|PMID:32358067)
GO_REF:0000107
RGD
Ensembl
PMID:32358067 GO_REF:0000107, MGI:6450299 NCBI chr 9:14,510,378...14,514,609
Ensembl chr 9:14,513,037...14,514,416
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:10637304) RGD PMID:10637304 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
negative regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Apoe apolipoprotein E ISO (PMID:12042316) RGD PMID:12042316 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Egf epidermal growth factor ISO (MGI:4460848|PMID:20037141) RGD PMID:20037141 MGI:4460848 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Pla2g10 phospholipase A2, group X IEA
ISO
GO_REF:0000107
(MGI:5051938|PMID:20844270)
Ensembl
RGD
PMID:20844270 GO_REF:0000107, MGI:5051938 NCBI chr10:1,509,732...1,520,970
Ensembl chr10:1,509,732...1,520,970
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:5306540|PMID:21931618)
Ensembl
RGD
PMID:21931618 GO_REF:0000107, MGI:5306540 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO
IEA
(PMID:15358760)
GO_REF:0000107
RGD
Ensembl
PMID:15358760 GO_REF:0000107 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
negative regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IEA
(PMID:15778093)
GO_REF:0000107
RGD
Ensembl
PMID:15778093 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
negative regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:8636092) RGD PMID:8636092 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc1 apolipoprotein C1 ISO
IBA
(PMID:10978346)
PMID:21873635
RGD PMID:10978346, PMID:21873635 RGD:13792537 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:15778093) RGD PMID:15778093 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G LOC100910181 apolipoprotein C-I-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G NEWGENE_2134 apolipoprotein C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,606,634...80,609,954
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
negative regulation of cholesterol transporter activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:8106353) RGD PMID:8106353 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
positive regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:25084135)
(MGI:3047008|PMID:15210959)
RGD PMID:15210959, PMID:25084135 MGI:3047008 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 ISO (PMID:23931754)
MGI:1352463|MGI:4461044 (MGI:5510615|PMID:23931754)
RGD PMID:23931754 MGI:5510615 NCBI chr 9:78,521,477...78,693,421
Ensembl chr 9:78,522,464...78,693,028
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISS
ISO
GO_REF:0000024
(MGI:5553242|PMID:18429932)
Alzheimers_University_of_Toronto
RGD
PMID:18429932 GO_REF:0000024, MGI:5553242 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:18703020)
GO_REF:0000024
RGD
BHF-UCL
PMID:18703020 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Apoa1 apolipoprotein A1 ISS
ISO
GO_REF:0000024
(PMID:27472885)
UniProt
RGD
PMID:27472885 GO_REF:0000024 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoe apolipoprotein E IEA
ISO
GO_REF:0000107
UniProtKB:P08226 (PMID:12042316), (PMID:12401887), (PMID:14754908)
Ensembl
RGD
PMID:12042316, PMID:12401887, PMID:14754908 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cav1 caveolin 1 ISO
IEA
(PMID:24576892)
GO_REF:0000107
RGD
Ensembl
PMID:24576892 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Ces1d carboxylesterase 1D ISO (PMID:16971496), (PMID:18599737), (PMID:18762277) RGD PMID:16971496, PMID:18599737, PMID:18762277 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 ISO (PMID:28082258)
(MGI:6162611|PMID:28082258)
RGD PMID:28082258 MGI:6162611 NCBI chr 8:26,651,241...26,758,330
Ensembl chr 8:26,652,121...26,758,325
JBrowse link
G Gps2 G protein pathway suppressor 2 ISO (PMID:19481530) RGD PMID:19481530 NCBI chr10:56,524,327...56,527,447
Ensembl chr10:56,524,468...56,526,987
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Nfkbia NFKB inhibitor alpha ISO (PMID:16938301) RGD PMID:16938301 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (PMID:17186944)
MGI:2676312 (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483), (MGI:5510615|PMID:23931754)
RGD PMID:16825483, PMID:17186944, PMID:17657314, PMID:23931754 MGI:3720271, MGI:3794353, MGI:5510615 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISS
ISO
GO_REF:0000024
(MGI:3794353|PMID:16825483)
(PMID:16141411), (PMID:17186944), (PMID:19481530)
UniProt
RGD
PMID:16141411, PMID:16825483, PMID:17186944, PMID:19481530 GO_REF:0000024, MGI:3794353 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Pltp phospholipid transfer protein ISO (PMID:24369175) RGD PMID:24369175 NCBI chr 3:161,304,469...161,322,289
Ensembl chr 3:161,304,469...161,322,289
JBrowse link
G Pon1 paraoxonase 1 ISO (PMID:15721011) RGD PMID:15721011 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
G Ptch1 patched 1 ISO (PMID:21931618) RGD PMID:21931618 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:3790014|PMID:17936707) RGD PMID:17936707 MGI:3790014 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 ISO (PMID:19556522) RGD PMID:19556522 NCBI chr11:86,903,122...86,917,261
Ensembl chr11:86,903,122...86,915,715
JBrowse link
positive regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 ISO MGI:2176228|MGI:5315712 (MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:5806548 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:22454363 RGD:13800524 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:16772292 RGD:9850270 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Washc1 WASH complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:5806548|PMID:26965651)
Ensembl
RGD
PMID:26965651 GO_REF:0000107, MGI:5806548 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
positive regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb4 ATP binding cassette subfamily B member 4 IEA
ISO
ISS
GO_REF:0000107
(PMID:17523162), (PMID:24045840)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17523162, PMID:24045840 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:22,133,984...22,192,687
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 ISO (MGI:5302163|PMID:22045928) RGD PMID:22045928 MGI:5302163 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 ISO (MGI:3588413|PMID:12393855) RGD PMID:12393855 MGI:3588413 NCBI chr 8:130,548,418...130,550,388
Ensembl chr 8:130,548,418...130,550,388
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ISS
ISO
GO_REF:0000024
(MGI:5574251|PMID:24650549)
UniProt
RGD
PMID:24650549 GO_REF:0000024, MGI:5574251 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO
GO_REF:0000024
(MGI:5780634|PMID:26833026)
UniProt
RGD
PMID:26833026 GO_REF:0000024, MGI:5780634 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 ISO
IBA
(PMID:15449949)
PMID:21873635
RGD PMID:15449949, PMID:21873635 RGD:13792537 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,973,171...138,975,624
Ensembl chr 3:138,974,871...138,975,621
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523, PMID:12464675, PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(PMID:6299582)
Ensembl
RGD
PMID:6299582 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523, PMID:12464675, PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
G Lrp6 LDL receptor related protein 6 IBA
ISO
PMID:21873635
MGI:4123883 (MGI:4413421|PMID:18948618)
RGD PMID:18948618, PMID:21873635 MGI:4413421, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISO
ISS
(PMID:20544018)
GO_REF:0000024
RGD
UniProt
PMID:20544018 GO_REF:0000024 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100361543 RhoA activator C11orf59-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G Naxe NAD(P)HX epimerase ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:187,424,319...187,426,410
Ensembl chr 2:187,424,327...187,426,375
JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B ISS
ISO
IBA
GO_REF:0000024
(MGI:5800596|PMID:27383786)
PMID:21873635
UniProt
RGD
PMID:27383786, PMID:21873635 GO_REF:0000024, MGI:5800596, RGD:13792537 NCBI chr 5:101,304,982...101,405,689
Ensembl chr 5:101,304,982...101,405,656
JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:2,886,764...2,895,118
Ensembl chr 6:2,886,764...2,895,118
JBrowse link
regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISO
ISS
(PMID:20544018)
GO_REF:0000024
RGD
UniProt
PMID:20544018 GO_REF:0000024 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100361543 RhoA activator C11orf59-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO
IEA
(PMID:11940599)
GO_REF:0000107
RGD
Ensembl
PMID:11940599 GO_REF:0000107 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) ISO MGI:3700008 (MGI:4941098|PMID:21147780) RGD PMID:21147780 MGI:4941098 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Osbpl6 oxysterol binding protein-like 6 ISO (PMID:26941018) RGD PMID:26941018 NCBI chr 3:63,257,646...63,455,105
Ensembl chr 3:63,353,178...63,454,967
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component ISO (MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:5496780 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 IBA
ISO
PMID:21873635
(MGI:1339009|PMID:10073953)
RGD PMID:10073953, PMID:21873635 MGI:1339009, RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO MGI:2157148 (MGI:84652|PMID:8962133) RGD PMID:8962133 MGI:84652 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 IBA
ISO
PMID:21873635
MGI:2157162 (MGI:1096980|PMID:9323588)
RGD PMID:9323588, PMID:21873635 MGI:1096980, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Lep leptin ISO (MGI:2386518|PMID:12114517) RGD PMID:12114517 MGI:2386518 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
ISS
(PMID:15238223)
GO_REF:0000024
RGD
UniProt
PMID:15238223 GO_REF:0000024 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ISO UniProtKB:P61916 (PMID:19723497)
(MGI:4358633|PMID:19723497)
RGD PMID:19723497 MGI:4358633 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236)
(MGI:3720273|PMID:17657311)
RGD PMID:10431236, PMID:17657311 MGI:3720273 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:3720273|PMID:17657311) RGD PMID:17657311 MGI:3720273 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa1 apolipoprotein A1 ISO
IBA
(PMID:15464323)
PMID:21873635
RGD PMID:15464323, PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 ISO
IBA
IEA
(PMID:3095477)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:3095477, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:8127890)
GO_REF:0000107
RGD
Ensembl
PMID:8127890 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M ISO (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Ces1d carboxylesterase 1D ISO (PMID:18599737), (PMID:18762277) RGD PMID:18599737, PMID:18762277 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:2384427 (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO (PMID:4335615) RGD PMID:4335615 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
ISS
(PMID:9211901)
(MGI:3842875|PMID:19136670)
GO_REF:0000024
RGD
BHF-UCL
PMID:9211901, PMID:19136670 GO_REF:0000024, MGI:3842875 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt7 synaptotagmin 7 ISS
ISO
GO_REF:0000024
(MGI:5645834|PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024, MGI:5645834 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      macromolecule localization 3078
        lipid localization 523
          lipid transport 471
            sterol transport 110
              cholesterol transport 97
                cholesterol efflux + 50
                cholesterol import + 14
                cholesterol transport involved in cholesterol storage 1
                intestinal cholesterol absorption + 16
                intracellular cholesterol transport + 24
                low-density lipoprotein particle disassembly involved in cholesterol transport 0
                negative regulation of cholesterol transport + 16
                positive regulation of cholesterol transport + 32
                regulation of cholesterol transport + 60
                reverse cholesterol transport + 12
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          ion transport 3500
            anion transport 2681
              organic substance transport 2558
                lipid transport 471
                  sterol transport 110
                    cholesterol transport 97
                      cholesterol efflux + 50
                      cholesterol import + 14
                      cholesterol transport involved in cholesterol storage 1
                      intestinal cholesterol absorption + 16
                      intracellular cholesterol transport + 24
                      low-density lipoprotein particle disassembly involved in cholesterol transport 0
                      negative regulation of cholesterol transport + 16
                      positive regulation of cholesterol transport + 32
                      regulation of cholesterol transport + 60
                      reverse cholesterol transport + 12
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.