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ONTOLOGY REPORT - ANNOTATIONS

Term:bone mineralization
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Accession:GO:0030282 term browser browse the term
Definition:The deposition of hydroxyapatite, a form of calcium phosphate with the formula Ca10(PO4)6(OH)2, in bone tissue.
Synonyms:narrow_synonym: bone calcification


show annotations for term's descendants           Sort by:
bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX15 arachidonate 15-lipoxygenase acts_upstream_of_or_within ISO (PMID:14716014) MGI PMID:14716014 NCBI chr17:4,686,339...4,696,877
Ensembl chr17:4,677,125...4,687,669 		JBrowse link
G ALPL alkaline phosphatase, biomineralization associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:20,702,509...20,772,301
Ensembl chr 1:21,667,732...21,736,688 		JBrowse link
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,014,019...15,175,467
Ensembl chr 5:14,855,914...14,917,729 		JBrowse link
G ASGR2 asialoglycoprotein receptor 2 ISO RGD PMID:19841953 RGD:2316850 NCBI chr17:7,131,490...7,145,110
Ensembl chr17:7,119,432...7,133,520 		JBrowse link
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,579,188...63,605,811
Ensembl chr 9:91,651,629...91,677,969 		JBrowse link
G ATF4 activating transcription factor 4 involved_in ISO (MGI:3040115|PMID:15109498) UniProt PMID:15109498 MGI:3040115 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249 		JBrowse link
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623616) Ensembl
MGI		 PMID:19623616 GO_REF:0000107 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19213727)
(PMID:15657444), (PMID:19213727)		 Ensembl
MGI		 PMID:15657444 PMID:19213727 GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:14,552,062...14,559,632
Ensembl chr 9:15,063,766...15,066,776 		JBrowse link
G CLEC3B C-type lectin domain family 3 member B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:44,927,098...44,936,847
Ensembl chr 3:46,038,115...46,047,927 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 7:86,344,657...86,381,282
Ensembl chr 7:99,935,185...99,971,803 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19248115) Ensembl
MGI		 PMID:19248115 GO_REF:0000107 NCBI chr21:32,322,185...32,346,850
Ensembl chr21:45,584,096...45,607,240 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27151399) Ensembl
MGI		 PMID:27151399 GO_REF:0000107 NCBI chr19:18,222,270...18,230,936
Ensembl chr19:19,229,562...19,238,008 		JBrowse link
G CST5 cystatin D involved_in ISO (PMID:16680148) MGI PMID:16680148 NCBI chr20:23,824,663...23,828,483
Ensembl chr20:24,178,197...24,182,016 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,158,814...31,164,462
Ensembl chr12:31,419,773...31,424,822 		JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:21308776) MGI PMID:21308776 NCBI chr14:81,348,380...81,356,607
Ensembl chr14:100,654,965...100,668,019 		JBrowse link
G DUOX2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chr15:24,040,513...24,061,758
Ensembl chr15:42,395,135...42,414,281 		JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:11997520) MGI PMID:11997520 NCBI chr2A:87,688,732...87,759,580
Ensembl chr2A:89,596,833...89,667,468 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21930712) Ensembl
MGI		 PMID:21930712 GO_REF:0000107 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17020410) Ensembl
MGI		 PMID:17020410 GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G FBXL15 F-box and leucine rich repeat protein 15 involved_in ISO PMID:21572392 UniProt PMID:21572392 RGD:8554771 NCBI chr10:99,022,732...99,026,623
Ensembl chr10:102,485,732...102,492,301 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:12756187) MGI PMID:12756187 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 involved_in ISO (MGI:4457789|PMID:20582225) BHF-UCL PMID:20582225 MGI:4457789 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G FGR FGR proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16964445) Ensembl
MGI		 PMID:16964445 GO_REF:0000107 NCBI chr 1:26,872,781...26,895,751
Ensembl chr 1:27,918,758...27,941,678 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27109613), (PMID:29571322) Ensembl
MGI		 PMID:27109613 PMID:29571322 GO_REF:0000107 NCBI chr19:43,738,339...43,748,250
Ensembl chr19:52,273,546...52,276,341 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509771) Ensembl
MGI		 PMID:15509771 GO_REF:0000107 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G GATA1 GATA binding protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15005853) Ensembl
MGI		 PMID:15005853 GO_REF:0000107 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GLA galactosidase alpha NOT|acts_upstream_of_or_within ISO (PMID:16697974) MGI PMID:16697974 NCBI chr  X:90,600,412...90,610,594
Ensembl chr  X:100,732,311...100,742,280 		JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within ISO (PMID:15936336) MGI PMID:15936336 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441 		JBrowse link
G GPNMB glycoprotein nmb ISO RGD PMID:11746512 RGD:632991 NCBI chr 7:23,931,220...23,959,687
Ensembl chr 7:23,539,928...23,568,624 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17181398) Ensembl
MGI		 PMID:17181398 GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G IBSP integrin binding sialoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25464126) Ensembl
TreeGrafter
MGI		 PMID:25464126 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:80,061,960...80,105,560
Ensembl chr 4:90,817,072...90,830,021 		JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO (PMID:23686339) MGI PMID:23686339 NCBI chr 1:4,987,384...5,002,213
Ensembl chr 1:6,246,570...6,258,746 		JBrowse link
G IFITM5 interferon induced transmembrane protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18442316) Ensembl
TreeGrafter
MGI		 PMID:18442316 GO_REF:0000107 GO_REF:0000118 NCBI chr11:294,184...295,525
Ensembl chr11:338,216...339,557
Ensembl chr11:338,216...339,557 		JBrowse link
G KLF10 KLF transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15657444) Ensembl
MGI		 PMID:15657444 GO_REF:0000107 NCBI chr 8:99,302,943...99,310,099
Ensembl chr 8:101,462,915...101,469,982 		JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571 		JBrowse link
G LOC100992172 SBDS ribosome maturation factor involved_in ISO (PMID:17920346) UniProt PMID:17920346 NCBI chr 7:59,090,343...59,098,332 JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19458888) Ensembl
MGI		 PMID:19458888 GO_REF:0000107 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr11:60,897,897...60,917,690
Ensembl chr11:64,233,504...64,252,802 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein acts_upstream_of ISO (PMID:12421822) MGI PMID:12421822 NCBI chr 4:80,125,612...80,139,539
Ensembl chr 4:90,838,938...90,864,332 		JBrowse link
G MINPP1 multiple inositol-polyphosphate phosphatase 1 NOT|involved_in ISO (MGI:1888425|PMID:10938126) UniProt PMID:10938126 MGI:1888425 NCBI chr10:84,230,676...84,280,042
Ensembl chr10:87,737,649...87,787,130 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,890,811...97,902,778
Ensembl chr11:101,377,001...101,387,679 		JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO (PMID:21406566) MGI PMID:21406566 NCBI chr 8:121,235,545...121,413,037
Ensembl chr 8:123,987,577...124,032,339 		JBrowse link
G NFE2 nuclear factor, erythroid 2 acts_upstream_of ISO (PMID:15005853) MGI PMID:15005853 NCBI chr12:34,442,913...34,452,016
Ensembl chr12:35,168,173...35,177,253 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:17353270) MGI PMID:17353270 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G PHEX phosphate regulating endopeptidase X-linked involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843468) Ensembl
MGI		 PMID:15843468 GO_REF:0000107 NCBI chr  X:14,663,847...14,859,294
Ensembl chr  X:22,017,681...22,232,501 		JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 involved_in ISO (MGI:5049900|PMID:20684022), (MGI:6814708|PMID:17227223), (MGI:6827210|PMID:26457330) UniProt PMID:17227223 PMID:20684022 PMID:26457330 MGI:5049900 MGI:6814708 MGI:6827210 NCBI chr17:8,373,032...8,381,410
Ensembl chr17:8,357,513...8,364,416 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic acts_upstream_of_or_within ISO (PMID:21553379) MGI PMID:21553379 NCBI chr2A:42,146,153...42,156,652 JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 acts_upstream_of_or_within ISO PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
G PTH parathyroid hormone involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19968565) Ensembl
MGI		 PMID:19968565 GO_REF:0000107 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802 		JBrowse link
G PTH1R parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11606467), (PMID:9832460) Ensembl
MGI		 PMID:9832460 PMID:11606467 GO_REF:0000107 NCBI chr 3:46,777,945...46,804,039
Ensembl chr 3:47,894,901...47,905,431 		JBrowse link
G PTHLH parathyroid hormone like hormone involved_in
acts_upstream_of
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:19968565)
(PMID:11606467)		 InterPro
MGI		 PMID:11606467 PMID:19968565 GO_REF:0000002 NCBI chr12:58,341,361...58,355,804
Ensembl chr12:60,960,071...60,973,750 		JBrowse link
G PTN pleiotrophin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12413943) Ensembl
MGI		 PMID:12413943 GO_REF:0000107 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:38172607) MGI
Ensembl		 PMID:38172607 GO_REF:0000107 NCBI chr16:3,721,063...3,727,056
Ensembl chr16:4,887,051...4,892,607 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:23337931 RGD:11537369 NCBI chr 9:62,782,183...63,005,626
Ensembl chr 9:90,851,983...90,965,084 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19213727) Ensembl
MGI		 PMID:19213727 GO_REF:0000107 NCBI chr 8:104,535,751...104,721,463
Ensembl chr 8:106,685,116...106,870,494 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21930712) Ensembl
MGI		 PMID:21930712 GO_REF:0000107 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23980096) Ensembl
MGI		 PMID:23980096 GO_REF:0000107 NCBI chr19:3,032...20,063
Ensembl chr19:1,086,968...1,136,272 		JBrowse link
G SLC24A3 solute carrier family 24 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6104227|PMID:28602864) ARUK-UCL
Ensembl		 PMID:28602864 GO_REF:0000107 MGI:6104227 NCBI chr20:19,168,820...19,680,706
Ensembl chr20:19,137,938...19,646,475 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24585429)
(PMID:21788370)		 Ensembl
MGI		 PMID:21788370 PMID:24585429 GO_REF:0000107 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of ISO (PMID:11371614) MGI PMID:11371614 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SPP1 secreted phosphoprotein 1 involved_in ISO (PMID:12817751) MGI PMID:12817751 NCBI chr 4:80,263,711...80,271,466
Ensembl chr 4:90,988,200...90,995,935 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19213727) MGI PMID:19213727 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27188440) Ensembl
MGI		 PMID:27188440 GO_REF:0000107 NCBI chr 9:76,854,177...76,938,334
Ensembl chr 9:104,980,935...105,128,988 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19213727) Ensembl
MGI		 PMID:19213727 GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23686339) Ensembl
MGI		 PMID:23686339 GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 acts_upstream_of_or_within ISO (PMID:22936354) MGI PMID:22936354 NCBI chr12:43,295,928...43,512,073
Ensembl chr12:44,164,375...44,303,259 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of ISO (PMID:21490954) MGI PMID:21490954 NCBI chr2A:25,730,155...25,880,089
Ensembl chr2A:25,832,527...25,973,659 		JBrowse link
G CCDC154 coiled-coil domain containing 154 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20121924) Ensembl
TreeGrafter
MGI		 PMID:20121924 GO_REF:0000107 GO_REF:0000118 NCBI chr16:54,158...64,522
Ensembl chr16:1,488,750...1,498,293 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22359666)
(PMID:25260930)		 MGI PMID:22359666 PMID:25260930 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26996322) Ensembl
MGI		 PMID:26996322 GO_REF:0000107 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:16433617) BHF-UCL PMID:16433617 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G LEP leptin ISO RGD PMID:21353474 RGD:5128507 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21272676) MGI
TreeGrafter		 PMID:21272676 GO_REF:0000118 NCBI chr17:8,373,032...8,381,410
Ensembl chr17:8,357,513...8,364,416 		JBrowse link
G SNX10 sorting nexin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25811986) Ensembl
MGI		 PMID:25811986 GO_REF:0000107 NCBI chr 7:26,935,357...27,017,461
Ensembl chr 7:26,537,189...26,620,720 		JBrowse link
negative regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHSG alpha 2-HS glycoprotein involved_in ISO
IEA		 RGD
Ensembl		 PMID:8702833 GO_REF:0000107 RGD:1626074 NCBI chr 3:183,644,223...183,652,620
Ensembl chr 3:192,110,770...192,119,915 		JBrowse link
G BCOR BCL6 corepressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:32,497,931...32,624,307
Ensembl chr  X:40,202,235...40,249,986 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,107,526...46,114,229
Ensembl chr 3:47,214,688...47,215,755 		JBrowse link
G ECM1 extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:125,853,337...125,858,904
Ensembl chr 1:129,502,041...129,507,819 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (MGI:5607146|PMID:25479107), (MGI:6220772|PMID:30111653), (MGI:6294341|PMID:22510396) UniProt PMID:22510396 PMID:25479107 PMID:30111653 MGI:5607146 MGI:6220772 MGI:6294341 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,479,116...4,488,797
Ensembl chr12:4,400,802...4,412,000 		JBrowse link
G GATA1 GATA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15005853) Ensembl
MGI		 PMID:15005853 GO_REF:0000107 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17181398) Ensembl
MGI		 PMID:17181398 GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G LOC100992309 C-C motif chemokine 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,704,738...20,706,641
Ensembl chr17:21,000,709...21,002,610 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr11:60,897,897...60,917,690
Ensembl chr11:64,233,504...64,252,802 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein acts_upstream_of_or_within ISO (PMID:12421822), (PMID:15843468)
(PMID:22766095)		 MGI PMID:12421822 PMID:15843468 PMID:22766095 NCBI chr 4:80,125,612...80,139,539
Ensembl chr 4:90,838,938...90,864,332 		JBrowse link
G NFE2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO (PMID:15005853) MGI PMID:15005853 NCBI chr12:34,442,913...34,452,016
Ensembl chr12:35,168,173...35,177,253 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:11371614) MGI PMID:11371614 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SRGN serglycin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:65,554,873...65,572,108
Ensembl chr10:68,089,392...68,106,250 		JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr19:46,168,301...46,224,726
Ensembl chr19:55,095,029...55,150,464 		JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chr15:11,213,870...11,230,619 JBrowse link
G PTH parathyroid hormone involved_in ISO PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802 		JBrowse link
G RFLNA refilin A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24436304) MGI
TreeGrafter		 PMID:24436304 GO_REF:0000118 NCBI chr12:121,737,946...121,903,635
Ensembl chr12:126,164,592...126,191,071 		JBrowse link
G RFLNB refilin B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24436304) Ensembl
TreeGrafter
MGI		 PMID:24436304 GO_REF:0000107 GO_REF:0000118 NCBI chr17:359,016...367,464
Ensembl chr17:375,885...381,580 		JBrowse link
positive regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:44,994,175...45,133,490
Ensembl chr2B:162,234,823...162,297,805 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:11,933,683...12,020,287
Ensembl chr2B:152,253,826...152,288,385 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,350,838...38,389,839
Ensembl chr 3:38,633,093...38,662,063 		JBrowse link
G ADGRV1 adhesion G protein-coupled receptor V1 involved_in ISO (MGI:6211994|PMID:22419726) UniProt PMID:22419726 MGI:6211994 NCBI chr 5:24,208,844...24,811,284
Ensembl chr 5:24,341,808...24,945,477 		JBrowse link
G ADRB2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15724149) Ensembl
MGI		 PMID:15724149 GO_REF:0000107 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
G ANO6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:43,295,928...43,512,073
Ensembl chr12:44,164,375...44,303,259 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:87,107,900...87,229,514
Ensembl chr12:90,427,560...90,495,320 		JBrowse link
G ATRAID all-trans retinoic acid induced differentiation factor involved_in ISO (PMID:21723284) UniProt PMID:21723284 NCBI chr2A:27,213,556...27,218,552
Ensembl chr2A:27,301,175...27,306,294 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14749725) RGD
Ensembl
MGI		 PMID:14749725 PMID:15352071 GO_REF:0000107 RGD:9068399 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,564,164...7,720,341
Ensembl chr 6:7,848,249...8,000,649 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:83,185,040...83,353,239
Ensembl chr10:86,837,469...86,912,912 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,125,911...87,523,084
Ensembl chr 4:98,088,072...98,195,848 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:89,631,622...89,823,438
Ensembl chr2B:207,780,741...207,961,072 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:118,138,739...118,141,681
Ensembl chr 1:86,994,296...86,997,147 		JBrowse link
G CD276 CD276 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15317945) Ensembl
MGI		 PMID:15317945 GO_REF:0000107 NCBI chr15:52,594,719...52,625,047 JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:18434589 RGD:151665814 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:17369251), (PMID:22615579) MGI PMID:17369251 PMID:22615579 NCBI chr 7:311,468...394,623 JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:123,673,209...123,953,741
Ensembl chr 5:129,435,248...129,715,711 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:20053668) MGI PMID:20053668 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G FZD9 frizzled class receptor 9 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,588,167...80,590,337 JBrowse link
G GPM6B glycoprotein M6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:6,377,913...6,544,826
Ensembl chr  X:13,666,192...13,711,964 		JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:927,418...928,491 JBrowse link
G KL klotho involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:14,272,463...14,321,122
Ensembl chr13:32,702,336...32,751,458 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (MGI:5285459|PMID:21652706) UniProt PMID:21652706 MGI:5285459 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr 1:198,291,200...198,339,502
Ensembl chr 1:203,304,237...203,354,919 		JBrowse link
G NELL1 neural EGFL like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,697,153...21,600,601
Ensembl chr11:20,607,526...21,508,486 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669 		JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:12677010), (PMID:18519738) MGI PMID:12677010 PMID:18519738 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in ISO (MGI:3813934|PMID:19097194) UniProt PMID:19097194 MGI:3813934 NCBI chr2A:42,146,153...42,156,652 JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:10807497 RGD:1642474 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
G PTH parathyroid hormone involved_in ISO
IEA		 RGD
Ensembl		 PMID:15758479 PMID:22445539 GO_REF:0000107 RGD:7207452 RGD:7242906 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802 		JBrowse link
G PTN pleiotrophin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G SLC20A2 solute carrier family 20 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,663,200...41,786,314
Ensembl chr 8:39,109,265...39,162,456 		JBrowse link
G SLC8A1 solute carrier family 8 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:40,169,339...40,586,546
Ensembl chr2A:40,939,900...41,363,038 		JBrowse link
G SMAD3 SMAD family member 3 ISO rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity RGD PMID:12096832 RGD:727387 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:79,636,412...79,643,444
Ensembl chr 6:82,901,079...82,908,072 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TMEM119 transmembrane protein 119 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,166,737...106,173,965
Ensembl chr12:109,563,684...109,564,535 		JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728361) Ensembl
MGI		 PMID:15728361 GO_REF:0000107 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734 		JBrowse link
G WNT4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (PMID:21490954) MGI PMID:21490954 NCBI chr2A:25,730,155...25,880,089
Ensembl chr2A:25,832,527...25,973,659 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10894769), (PMID:7276519) Ensembl
MGI		 PMID:7276519 PMID:10894769 GO_REF:0000107 NCBI chr 5:15,014,019...15,175,467
Ensembl chr 5:14,855,914...14,917,729 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432 		JBrowse link
G BMP2K BMP2 inducible kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500515) Ensembl
MGI		 PMID:11500515 GO_REF:0000107 NCBI chr 4:45,278,419...45,420,212
Ensembl chr 4:51,125,098...51,215,526 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21350216) Ensembl
MGI		 PMID:21350216 GO_REF:0000107 NCBI chr19:18,222,270...18,230,936
Ensembl chr19:19,229,562...19,238,008 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,158,814...31,164,462
Ensembl chr12:31,419,773...31,424,822 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:138,048,730...138,200,426
Ensembl chr 1:141,932,158...141,990,766 		JBrowse link
G ECM1 extracellular matrix protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20138147) Ensembl
TreeGrafter
MGI		 PMID:20138147 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:125,853,337...125,858,904
Ensembl chr 1:129,502,041...129,507,819 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15579309) Ensembl
MGI		 PMID:15579309 GO_REF:0000107 NCBI chr12:4,479,116...4,488,797
Ensembl chr12:4,400,802...4,412,000 		JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (PMID:21346198) MGI PMID:21346198 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G MATN1 matrilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16877353) Ensembl
MGI		 PMID:16877353 GO_REF:0000107 NCBI chr 1:29,984,376...29,996,430
Ensembl chr 1:31,011,638...31,021,695 		JBrowse link
G MGP matrix Gla protein involved_in IEA InterPro GO_REF:0000002 NCBI chr12:14,887,806...14,891,796
Ensembl chr12:15,284,883...15,288,523 		JBrowse link
G NBR1 NBR1 autophagy cargo receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,119,638...14,197,827
Ensembl chr17:14,351,229...14,390,597 		JBrowse link
G NOTUM notum, palmitoleoyl-protein carboxylesterase acts_upstream_of_or_within ISO (PMID:30622831) MGI PMID:30622831 NCBI chr17:76,353,528...76,364,634 JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,893,199...103,898,381
Ensembl chr 1:102,608,839...102,609,987 		JBrowse link
G SGMS2 sphingomyelin synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,329,642...100,420,398
Ensembl chr 4:110,936,358...110,992,887 		JBrowse link
G STATH statherin involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 4:54,234,876...54,241,349
Ensembl chr 4:60,571,712...60,578,215 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23695662) MGI PMID:23695662 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:19597909) BHF-UCL PMID:19597909 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G TXLNG taxilin gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:9,407,049...9,465,452
Ensembl chr  X:16,776,076...16,831,926 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23695662) Ensembl
MGI		 PMID:23695662 GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16768
    multicellular organismal process 7288
      ossification 441
        bone mineralization 139
          bone mineralization involved in bone maturation + 15
          negative regulation of bone mineralization + 20
          phosphatidylserine exposure on osteoblast involved in bone mineralization 0
          positive regulation of bone mineralization + 46
          regulation of bone mineralization + 83
Path 2
Term Annotations click to browse term
  biological_process 16768
    developmental process 6615
      anatomical structure development 6217
        tissue development 2198
          biomineral tissue development 184
            bone mineralization 139
              bone mineralization involved in bone maturation + 15
              negative regulation of bone mineralization + 20
              phosphatidylserine exposure on osteoblast involved in bone mineralization 0
              positive regulation of bone mineralization + 46
              regulation of bone mineralization + 83
paths to the root