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ONTOLOGY REPORT - ANNOTATIONS


Term:clathrin binding
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Accession:GO:0030276 term browser browse the term
Definition:Binding to a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.



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clathrin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin enables ISO
IBA
(PMID:15758025)
PMID:21873635
RGD PMID:15758025 PMID:21873635 RGD:13792537 NCBI chr14:94,871,429...94,925,625
Ensembl chr14:94,871,429...94,925,376
JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 enables IEA
IC
GO_REF:0000002
PMID:8262066
InterPro PMID:8262066 GO_REF:0000002, RGD:2306271 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 enables IDA
ISO
IBA
UniProtKB:P53675 (PMID:19509056), (PMID:8262066)
PMID:21873635
RGD PMID:8262066 PMID:19509056 PMID:8262066 PMID:21873635 PMID:8262066 RGD:2306271, RGD:13792537, RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:191,318,485...191,330,531
Ensembl chr 2:191,318,482...191,330,531
JBrowse link
G Arrb1 arrestin, beta 1 IDA RGD PMID:17513300 RGD:5490984 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Bcl2l1 Bcl2-like 1 enables IPI PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:131,882,866...131,889,662
Ensembl chr 6:131,882,609...131,889,662
JBrowse link
G Clint1 clathrin interactor 1 enables IDA
ISO
IBA
UniProtKB:Q00610 (PMID:12429846)
PMID:21873635
RGD PMID:12429846 PMID:12213833 PMID:21873635 RGD:1303953, RGD:13792537 NCBI chr10:30,298,618...30,353,185
Ensembl chr10:30,298,704...30,353,063
JBrowse link
G Dab2 DAB adaptor protein 2 enables ISO (MGI:5442514|PMID:12234931) RGD PMID:12234931 MGI:5442514 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:116,120,069...116,283,448
Ensembl chr 5:116,119,676...116,283,448
JBrowse link
G Dnm1l dynamin 1-like enables IPI PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Enthd1 ENTH domain containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,994,775...112,109,246
Ensembl chr 7:111,995,395...112,109,246
JBrowse link
G Epn1 Epsin 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:68,742,491...68,760,507
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Epn2 epsin 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642
JBrowse link
G Epn3 epsin 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,438,978...79,449,516
Ensembl chr10:79,438,978...79,447,356
JBrowse link
G Gak cyclin G associated kinase enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398
JBrowse link
G Hip1 huntingtin interacting protein 1 enables IDA
ISO
(PMID:11577110), (PMID:14732715) RGD PMID:11577110 PMID:14732715 PMID:11889126 RGD:708337 NCBI chr12:21,133,319...21,267,796
Ensembl chr12:21,133,406...21,267,725
JBrowse link
G Hip1r huntingtin interacting protein 1 related enables ISO (PMID:14732715)
(MGI:5805370|PMID:11564758)
RGD PMID:11564758 PMID:14732715 MGI:5805370 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 enables ISO (PMID:12221107), (PMID:12451172) RGD PMID:12221107 PMID:12451172 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 enables ISO UniProtKB:Q68FD5 (PMID:21307259) RGD PMID:21307259 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Ncald neurocalcin delta enables ISO (PMID:11964161) RGD PMID:11964161 NCBI chr 7:68,532,671...68,964,740
Ensembl chr 7:68,534,421...68,964,496
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein enables ISS
IDA
ISO
IEA
GO_REF:0000024
PMID:11161218
(PMID:10436022), (PMID:16262731)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:10436022 PMID:16262731 PMID:11161218 GO_REF:0000002 GO_REF:0000024, RGD:8554293 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha enables ISO (PMID:11239472) RGD PMID:11239472 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Sclt1 sodium channel and clathrin linker 1 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 2:124,605,445...124,763,964
Ensembl chr 2:124,605,658...124,764,065
JBrowse link
G Smap1 small ArfGAP 1 enables ISO (MGI:3581491|PMID:15659652) RGD PMID:15659652 MGI:3581491 NCBI chr 9:26,250,178...26,342,151
Ensembl chr 9:26,249,978...26,342,170
JBrowse link
G Snap91 synaptosome associated protein 91 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Syt1 synaptotagmin 1 enables IBA
IDA
PMID:21873635
PMID:7791877
GO_Central
BHF-UCL
PMID:21873635 PMID:7791877 RGD:13792537, RGD:61762 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt10 synaptotagmin 10 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,863,014...120,920,730
Ensembl chr 7:120,862,972...120,920,863
JBrowse link
G Syt11 synaptotagmin 11 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt12 synaptotagmin 12 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Syt13 synaptotagmin 13 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:78,877,200...78,915,375
Ensembl chr 3:78,877,114...78,917,392
JBrowse link
G Syt15 synaptotagmin 15 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,532,478...9,543,288
Ensembl chr16:9,532,478...9,543,281
JBrowse link
G Syt17 synaptotagmin 17 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:172,695,275...172,761,906
Ensembl chr 1:172,696,120...172,761,960
JBrowse link
G Syt2 synaptotagmin 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt3 synaptotagmin 3 enables IBA
IDA
PMID:21873635
PMID:7791877
GO_Central
BHF-UCL
PMID:21873635 PMID:7791877 RGD:13792537, RGD:61762 NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246
JBrowse link
G Syt4 synaptotagmin 4 enables IBA
IDA
PMID:21873635
PMID:7791877
GO_Central
BHF-UCL
PMID:21873635 PMID:7791877 RGD:13792537, RGD:61762 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
G Syt5 synaptotagmin 5 enables IDA
IBA
PMID:7791877
PMID:21873635
BHF-UCL
GO_Central
PMID:7791877 PMID:21873635 RGD:61762, RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt6 synaptotagmin 6 enables IBA
ISO
PMID:21873635
(PMID:7791877)
RGD PMID:7791877 PMID:21873635 RGD:13792537 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956
JBrowse link
G Syt7 synaptotagmin 7 enables IBA
IDA
PMID:21873635
PMID:7791877
GO_Central
BHF-UCL
PMID:21873635 PMID:7791877 RGD:13792537, RGD:61762 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt8 synaptotagmin 8 enables IDA
IBA
PMID:7791877
PMID:21873635
BHF-UCL
GO_Central
PMID:7791877 PMID:21873635 RGD:61762, RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Syt9 synaptotagmin 9 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007
JBrowse link
G Tom1 target of myb1 membrane trafficking protein enables IBA
ISO
PMID:21873635
(PMID:16412388)
RGD PMID:16412388 PMID:21873635 RGD:13792537 NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
JBrowse link
G Tom1l1 target of myb1 like 1 membrane trafficking protein enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:16412388)
Ensembl
RGD
PMID:16412388 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:75,464,577...75,508,304
Ensembl chr10:75,464,577...75,508,250
JBrowse link
G Tom1l2 target of myb1 like 2 membrane trafficking protein enables IBA
ISO
PMID:21873635
(PMID:16412388)
RGD PMID:16412388 PMID:21873635 RGD:13792537 NCBI chr10:45,036,034...45,158,168
Ensembl chr10:45,036,035...45,158,032
JBrowse link
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 IDA RGD PMID:16025302 RGD:10043786 NCBI chr  X:107,946,163...108,230,978
Ensembl chr  X:107,939,131...108,230,991
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 IDA RGD PMID:16025302 RGD:10043786 NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092
JBrowse link
clathrin adaptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,571,571...28,579,421
Ensembl chr15:28,571,568...28,589,004
JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,586,886...17,602,410
Ensembl chr16:17,584,730...17,602,403
JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:19,838,579...19,856,560
Ensembl chr 8:19,838,580...19,856,482
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,625,267...19,635,792
Ensembl chr12:19,625,332...19,756,713
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,950,402...81,039,685
Ensembl chr 9:80,950,715...81,009,798
JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:95,384,303...95,414,249
Ensembl chr 1:95,384,309...95,414,147
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 enables IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:77,417,496...77,428,903
Ensembl chr 1:77,417,477...77,428,905
JBrowse link
G Arrb1 arrestin, beta 1 enables IDA PMID:15728179 BHF-UCL PMID:15728179 RGD:1601545 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Dab2 DAB adaptor protein 2 enables IEA
ISO
GO_REF:0000107
(MGI:5442508|PMID:16984970)
Ensembl
RGD
PMID:16984970 GO_REF:0000107 MGI:5442508 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Epn1 Epsin 1 enables IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 1:68,742,491...68,760,507
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Hip1 huntingtin interacting protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:21,133,319...21,267,796
Ensembl chr12:21,133,406...21,267,725
JBrowse link
G Hip1r huntingtin interacting protein 1 related enables IBA
ISO
PMID:21873635
(MGI:5805370|PMID:11564758)
RGD PMID:11564758 PMID:21873635 MGI:5805370, RGD:13792537 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 enables ISO (PMID:15728179) RGD PMID:15728179 NCBI chr 5:146,955,607...146,978,601
Ensembl chr 5:146,955,607...146,978,601
JBrowse link
G Snap91 synaptosome associated protein 91 enables IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Ston1 stonin 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Ston2 stonin 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376
JBrowse link
clathrin heavy chain binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cemip cell migration inducing hyaluronidase 1 enables ISO
ISS
(PMID:23509262)
GO_REF:0000024
RGD
UniProt
PMID:23509262 GO_REF:0000024 NCBI chr 1:137,906,921...138,062,430
Ensembl chr 1:137,908,920...138,062,415
JBrowse link
G Clta clathrin, light chain A enables ISO
IBA
UniProtKB:Q00610 (PMID:4066749)
PMID:21873635
RGD PMID:4066749 PMID:21873635 RGD:13792537 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Gpr107 G protein-coupled receptor 107 enables IBA
ISO
PMID:21873635
(MGI:5604949|PMID:24849652)
RGD PMID:24849652 PMID:21873635 MGI:5604949, RGD:13792537 NCBI chr 3:14,431,704...14,497,623
Ensembl chr 3:14,434,723...14,495,958
JBrowse link
G Lmbrd1 LMBR1 domain containing 1 enables ISS
ISO
GO_REF:0000024
(MGI:5543853|PMID:24078630)
UniProt
RGD
PMID:24078630 GO_REF:0000024 MGI:5543853 NCBI chr 9:27,096,387...27,178,095
Ensembl chr 9:27,096,297...27,178,090
JBrowse link
G Lrp1 LDL receptor related protein 1 enables ISO UniProtKB:Q00610 (PMID:26005850) RGD PMID:26005850 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein enables IEA
ISO
IBA
GO_REF:0000107
(PMID:10436022)
PMID:21873635
Ensembl
RGD
PMID:10436022 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 enables IBA
ISO
IPI
PMID:21873635
UniProtKB:P11442 (MGI:4418638|PMID:11102472)
PMID:11756460
RGD PMID:11102472 PMID:21873635 PMID:11756460 MGI:4418638, RGD:13792537, RGD:12793027 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
clathrin light chain binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caly calcyon neuron-specific vesicular protein enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:16595675)
UniProt
RGD
PMID:16595675 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551
JBrowse link
G Cltc clathrin heavy chain enables ISO
IEA
IBA
UniProtKB:P09496 (PMID:4066749)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:4066749 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Hip1 huntingtin interacting protein 1 enables IBA
ISO
PMID:21873635
UniProtKB:P04973|UniProtKB:P04975 (PMID:15533940), (PMID:18790740)
RGD PMID:15533940 PMID:18790740 PMID:21873635 RGD:13792537 NCBI chr12:21,133,319...21,267,796
Ensembl chr12:21,133,406...21,267,725
JBrowse link
G Hip1r huntingtin interacting protein 1 related enables IBA
ISO
PMID:21873635
UniProtKB:P04973|UniProtKB:P04975 (MGI:5763378|PMID:15533940), (MGI:5805365|PMID:18790740)
RGD PMID:15533940 PMID:18790740 PMID:21873635 MGI:5763378 MGI:5805365, RGD:13792537 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,601,594...15,661,441
Ensembl chr10:15,601,596...15,661,441
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20203
    binding 17217
      protein binding 14511
        clathrin binding 68
          clathrin adaptor activity 19
          clathrin heavy chain binding 8
          clathrin light chain binding 6
paths to the root