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ONTOLOGY REPORT - ANNOTATIONS


Term:myofibril assembly
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Accession:GO:0030239 term browser browse the term
Definition:Formation of myofibrils, the repeating units of striated muscle.



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myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3046866 (MGI:3046122|PMID:15138196)
UniProt
RGD
PMID:15138196 GO_REF:0000024 MGI:3046122 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Flii FLII, actin remodeling protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,394,032...45,408,051
Ensembl chr10:45,394,032...45,407,970
JBrowse link
G Klhl41 kelch-like family member 41 involved_in ISS
ISO
GO_REF:0000024
(MGI:5486546|PMID:18178185)
UniProt
RGD
PMID:18178185 GO_REF:0000024 MGI:5486546 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Lmod1 leiomodin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,754,048...46,796,186
Ensembl chr13:46,754,033...46,794,900
JBrowse link
G Lmod2 leiomodin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,067,428...53,075,124
Ensembl chr 4:53,067,428...53,075,120
JBrowse link
G Lmod3 leiomodin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386439|MGI:2386445 (MGI:1354135|PMID:10712438) RGD PMID:10712438 MGI:1354135 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myh6 myosin heavy chain 6 acts_upstream_of_or_within ISO MGI:2182704|MGI:3652543 (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683), (MGI:83539|PMID:8878443) RGD PMID:8878443 PMID:9884344 PMID:10066683 MGI:1327483 MGI:1333559 MGI:83539 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myl9 myosin light chain 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:145,281,943...145,288,333
Ensembl chr 3:145,281,937...145,288,333
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:153,566,659...153,569,380
Ensembl chr 3:153,566,660...153,569,380
JBrowse link
G Pgm5 phosphoglucomutase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,325,638...222,513,423
Ensembl chr 1:222,325,643...222,513,437
JBrowse link
G Tmod1 tropomodulin 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2687078 (MGI:2683807|PMID:14657235)
PMID:21873635
RGD PMID:14657235 PMID:21873635 MGI:2683807, RGD:13792537 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
JBrowse link
G Tmod2 tropomodulin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,316,736...76,366,003
Ensembl chr 8:76,325,667...76,365,720
JBrowse link
G Tmod3 tropomodulin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,248,978...76,310,855
Ensembl chr 8:76,248,979...76,310,977
JBrowse link
G Tmod4 tropomodulin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,695,709...182,700,540
Ensembl chr 2:182,695,709...182,700,540
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:36,613,677...36,811,618
Ensembl chr 3:36,613,716...36,811,574
JBrowse link
G Nebl nebulette involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:11822876), (PMID:18823973)
PMID:21873635
UniProt
RGD
PMID:11822876 PMID:18823973 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:80,113,891...80,466,331
Ensembl chr17:80,118,543...80,466,210
JBrowse link
G Nrap nebulin-related anchoring protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:255,350,113...255,427,704
Ensembl chr 1:255,350,113...255,427,693
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Adprhl1 ADP-ribosylhydrolase like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:76,283,199...76,298,614
Ensembl chr16:76,283,103...76,354,440
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:2447926|PMID:12507422)
Ensembl
RGD
PMID:12507422 GO_REF:0000107 MGI:2447926 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5440613 (MGI:5436289|PMID:23213483)
RGD PMID:23213483 PMID:21873635 MGI:5436289, RGD:13792537 NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445 (MGI:1099556|PMID:9356462) RGD PMID:9356462 MGI:1099556 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myl2 myosin light chain 2 acts_upstream_of_or_within ISO MGI:2385922 (MGI:1194431|PMID:9422794) RGD PMID:9422794 MGI:1194431 NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IMP
IBA
PMID:17885681
PMID:21873635
BHF-UCL
GO_Central
PMID:17885681 PMID:21873635 RGD:8554371, RGD:13792537 NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA
ISO
ISS
GO_REF:0000107
UniProtKB:P05622 (MGI:1931346|PMID:11239463)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11239463 GO_REF:0000024 GO_REF:0000107 MGI:1931346 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P26618 (MGI:1931346|PMID:11239463)
UniProt
RGD
PMID:11239463 GO_REF:0000024 MGI:1931346 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within
ISO (PMID:11846417), (PMID:9817758)
MGI:3654306 (MGI:3653555|PMID:16702235)
RGD PMID:9817758 PMID:11846417 PMID:16702235 MGI:3653555 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3689643|PMID:16151019)
Ensembl
RGD
PMID:16151019 GO_REF:0000107 MGI:3689643 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO (PMID:12847114) RGD PMID:12847114 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:24777478 RGD:13204833 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in ISO
IEA
(PMID:17921333)
GO_REF:0000107
RGD
Ensembl
PMID:17921333 GO_REF:0000107 NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:12847114) RGD PMID:12847114 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IDA PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A-kinase anchoring protein 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5308772|PMID:20139090)
UniProt
RGD
PMID:20139090 GO_REF:0000024 MGI:5308772 NCBI chr 1:129,313,183...129,619,647
Ensembl chr 1:129,314,402...129,619,646
JBrowse link
G Ankrd23 ankyrin repeat domain 23 acts_upstream_of_or_within ISO MGI:1097717|MGI:1861447 (MGI:3760007|PMID:17392382) RGD PMID:17392382 MGI:3760007 NCBI chr 9:38,773,234...38,779,839
Ensembl chr 9:38,773,240...38,779,839
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:3712002 (MGI:3711360|PMID:17322895) RGD PMID:17322895 MGI:3711360 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3768576|PMID:17875930) RGD PMID:17875930 MGI:3768576 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 acts_upstream_of_or_within ISO (MGI:3053481|PMID:15194427) RGD PMID:15194427 MGI:3053481 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Actn1 actinin, alpha 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO (PMID:25433700) RGD PMID:25433700 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IMP PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
JBrowse link
G Capn3 calpain 3 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:3046866 (MGI:3046122|PMID:15138196)
GO_REF:0000107
GO_REF:0000002
UniProt
RGD
Ensembl
InterPro
PMID:15138196 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:3046122 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Casq1 calsequestrin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5306707|PMID:22049211)
UniProt
RGD
PMID:22049211 GO_REF:0000024 MGI:5306707 NCBI chr13:84,670,648...84,680,339
Ensembl chr13:84,670,649...84,680,339
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO (MGI:4453101|PMID:19920148) RGD PMID:19920148 MGI:4453101 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267
JBrowse link
G Cfl2 cofilin 2 acts_upstream_of_or_within ISO MGI:2182095|MGI:5316051|MGI:5316057 (MGI:5316079|PMID:22343409) RGD PMID:22343409 MGI:5316079 NCBI chr 6:72,355,664...72,359,709
Ensembl chr 6:72,355,664...72,359,674
JBrowse link
G Csrp1 cysteine and glycine-rich protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,158,171...47,179,388
Ensembl chr13:47,167,789...47,179,384
JBrowse link
G Csrp2 cysteine and glycine-rich protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:46,349,109...46,367,743
Ensembl chr 7:46,348,686...46,367,745
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Fhod3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IBA
IMP
UniProtKB:F1LQJ2 (MGI:4422153|PMID:19706596)
PMID:21873635
RGD PMID:19706596 PMID:21873635 PMID:19706596 MGI:4422153, RGD:13792537, RGD:8554207 NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796
JBrowse link
G Flnc filamin C involved_in ISO
ISS
(PMID:34405687)
GO_REF:0000024
RGD
UniProt
PMID:34405687 GO_REF:0000024 NCBI chr 4:58,034,088...58,061,882
Ensembl chr 4:58,034,189...58,061,844
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:97350 (MGI:4829405|PMID:20713518) RGD PMID:20713518 MGI:4829405 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154539 (MGI:84974|PMID:9004034)
Ensembl
RGD
PMID:9004034 GO_REF:0000107 MGI:84974 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Klhl41 kelch-like family member 41 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Krt19 keratin 19 involved_in ISO (PMID:16000376) RGD PMID:16000376 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt8 keratin 8 involved_in IDA PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728
JBrowse link
G Ldb3 LIM domain binding 3 acts_upstream_of_or_within ISO MGI:2652058 (MGI:2153618|PMID:11696561) RGD PMID:11696561 MGI:2153618 NCBI chr16:9,855,768...9,920,108
Ensembl chr16:9,855,927...9,918,532
JBrowse link
G Lmod2 leiomodin 2 involved_in ISO
IEA
IMP
(PMID:18403713)
GO_REF:0000107
(MGI:5787841|PMID:27274810)
RGD
Ensembl
PMID:18403713 PMID:27274810 PMID:18403713 GO_REF:0000107 MGI:5787841, RGD:11344939 NCBI chr 4:53,067,428...53,075,124
Ensembl chr 4:53,067,428...53,075,120
JBrowse link
G Mybpc3 myosin binding protein C3 acts_upstream_of_or_within ISO MGI:2654420|MGI:3606208 (MGI:3616388|PMID:16380103), (MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063) RGD PMID:16224063 PMID:16380103 PMID:17075052 MGI:3616388 MGI:3695637 MGI:3696622 NCBI chr 3:77,095,165...77,113,406
Ensembl chr 3:77,095,252...77,113,405
JBrowse link
G Myh6 myosin heavy chain 6 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:3652543 (MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443 PMID:21873635 GO_REF:0000107 MGI:83539, RGD:13792537 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh7 myosin heavy chain 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IBA
ISO
IMP
PMID:21873635
(MGI:3841874|PMID:18202317)
RGD PMID:18202317 PMID:21873635 PMID:18202317 MGI:3841874, RGD:13792537, RGD:8554765 NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
JBrowse link
G Myom2 myomesin 2 involved_in ISO (PMID:33033063) RGD PMID:33033063 NCBI chr16:74,520,148...74,592,658
Ensembl chr16:74,520,157...74,592,772
JBrowse link
G Myoz1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:3,644,333...3,651,584
Ensembl chr15:3,644,368...3,652,884
JBrowse link
G Myoz2 myozenin 2 involved_in ISO (MGI:3513659|PMID:15543153) RGD PMID:15543153 MGI:3513659 NCBI chr 2:211,141,463...211,168,202
Ensembl chr 2:211,141,463...211,168,221
JBrowse link
G Mypn myopalladin involved_in ISO (PMID:11309420) RGD PMID:11309420 NCBI chr20:25,429,898...25,522,443
Ensembl chr20:25,436,843...25,522,443
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:153,566,659...153,569,380
Ensembl chr 3:153,566,660...153,569,380
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO MGI:1914004 (MGI:4829405|PMID:20713518) RGD PMID:20713518 MGI:4829405 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Plec plectin involved_in ISO (MGI:5567855|PMID:24487589) RGD PMID:24487589 MGI:5567855 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within ISO MGI:2182091|MGI:3512112 (MGI:3821563|PMID:18316483) RGD PMID:18316483 MGI:3821563 NCBI chr10:94,621,042...94,639,534
Ensembl chr10:94,620,039...94,639,041
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Synpo2l synaptopodin 2-like involved_in ISO (MGI:6102963|PMID:29206857) RGD PMID:29206857 MGI:6102963 NCBI chr15:3,631,974...3,641,429
Ensembl chr15:3,631,834...3,641,429
JBrowse link
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
G Tnnt2 troponin T2, cardiac type acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3692448|MGI:3692450|MGI:3692451 (MGI:1342889|PMID:10449439)
PMID:21873635
RGD PMID:10449439 PMID:21873635 MGI:1342889, RGD:13792537 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link
G Tpm1 tropomyosin 1 involved_in ISO (PMID:11273725) RGD PMID:11273725 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802
JBrowse link
G Ttn titin acts_upstream_of_or_within
involved_in
IDA
ISO
MGI:3654306 (MGI:3653555|PMID:16702235), (MGI:3760201|PMID:17360664)
(PMID:11846417), (PMID:9817758)
RGD PMID:9817758 PMID:11846417 PMID:16702235 PMID:17360664 PMID:11034912 MGI:3653555 MGI:3760201, RGD:634444 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
G Wdr1 WD repeat domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5574550|PMID:24840128)
RGD PMID:24840128 PMID:21873635 MGI:5574550, RGD:13792537 NCBI chr14:72,258,032...72,291,768
Ensembl chr14:72,257,956...72,291,766
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 acts_upstream_of_or_within ISO MGI:3521795 (MGI:3775114|PMID:17766470) RGD PMID:17766470 MGI:3775114 NCBI chr 8:119,744,778...119,757,547
Ensembl chr 8:119,747,419...119,757,349
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk3 myosin light chain kinase 3 involved_in IMP PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
JBrowse link
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Tmod1 tropomodulin 1 NOT|acts_upstream_of_or_within ISO MGI:2687078 (MGI:2683807|PMID:14657235) RGD PMID:14657235 MGI:2683807 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:11333380)
PMID:21873635
UniProt
RGD
PMID:11333380 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Plec plectin involved_in ISO (MGI:5567855|PMID:24487589) RGD PMID:24487589 MGI:5567855 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a involved_in IEA
ISO
GO_REF:0000107
(MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107 MGI:2429350 NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3042511 (MGI:4355491|PMID:19546853)
GO_REF:0000107
RGD
Ensembl
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18872
    developmental process 6918
      anatomical structure formation involved in morphogenesis 1333
        cellular component assembly involved in morphogenesis 135
          myofibril assembly 74
            cardiac myofibril assembly + 19
            muscle thin filament assembly 0
            sarcomere organization + 52
            sarcomerogenesis 3
            skeletal myofibril assembly + 9
            striated muscle myosin thick filament assembly + 3
            striated muscle paramyosin thick filament assembly 0
Path 2
Term Annotations click to browse term
  biological_process 18872
    cellular process 17581
      cellular component organization or biogenesis 6570
        cellular component organization 6338
          organelle organization 3922
            cytoskeleton organization 1503
              actin cytoskeleton organization 755
                actomyosin structure organization 220
                  myofibril assembly 74
                    cardiac myofibril assembly + 19
                    muscle thin filament assembly 0
                    sarcomere organization + 52
                    sarcomerogenesis 3
                    skeletal myofibril assembly + 9
                    striated muscle myosin thick filament assembly + 3
                    striated muscle paramyosin thick filament assembly 0
paths to the root