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ONTOLOGY REPORT - ANNOTATIONS


Term:myofibril assembly
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Accession:GO:0030239 term browser browse the term
Definition:Formation of myofibrils, the repeating units of striated muscle.


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myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within IMP (MGI:3046122|PMID:15138196) MGI PMID:15138196 MGI:3046122 NCBI chr 2:120,463,593...120,504,919
Ensembl chr 2:120,463,572...120,504,918
Ensembl chr 2:120,463,572...120,504,918
JBrowse link
G Flii flightless I actin binding protein involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:60,714,143...60,727,263
Ensembl chr11:60,714,123...60,727,263
JBrowse link
G Klhl41 kelch-like 41 involved_in IMP (MGI:5486546|PMID:18178185) UniProt PMID:18178185 MGI:5486546 NCBI chr 2:69,670,120...69,684,239
Ensembl chr 2:69,670,120...69,684,230
JBrowse link
G Lmod1 leiomodin 1 (smooth muscle) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:135,324,813...135,368,065
Ensembl chr 1:135,324,807...135,368,065
JBrowse link
G Lmod2 leiomodin 2 (cardiac) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:24,597,771...24,605,414
Ensembl chr 6:24,597,762...24,605,414
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:97,238,530...97,253,217
Ensembl chr 6:97,238,534...97,252,759
JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (MGI:1354135|PMID:10712438) MGI PMID:10712438 MGI:1354135 NCBI chr11:68,691,915...68,816,626
Ensembl chr11:68,691,559...68,816,632
JBrowse link
G Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha acts_upstream_of_or_within IMP (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683)
(MGI:83539|PMID:8878443)
MGI PMID:8878443 PMID:9884344 PMID:10066683 MGI:1327483 MGI:1333559 MGI:83539 NCBI chr14:54,941,921...54,968,017
Ensembl chr14:54,941,921...54,966,927
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within IMP (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr 2:164,830,730...164,833,596
Ensembl chr 2:164,830,732...164,833,456
JBrowse link
G Pgm5 phosphoglucomutase 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr19:24,678,261...24,861,842
Ensembl chr19:24,683,016...24,861,855
JBrowse link
G Tmod1 tropomodulin 1 acts_upstream_of_or_within
involved_in
IMP
IBA
(MGI:2683807|PMID:14657235)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:14657235 PMID:21873635 MGI:2683807 MGI:6201960 NCBI chr 4:46,038,940...46,116,032
Ensembl chr 4:46,038,935...46,116,032
JBrowse link
G Tmod2 tropomodulin 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:75,565,621...75,611,342
Ensembl chr 9:75,565,621...75,611,325
JBrowse link
G Tmod3 tropomodulin 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:75,497,784...75,559,657
Ensembl chr 9:75,497,707...75,559,657
JBrowse link
G Tmod4 tropomodulin 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:95,122,799...95,129,209
Ensembl chr 3:95,124,476...95,129,209
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:52,136,640...52,338,798
Ensembl chr 2:52,136,647...52,378,474
JBrowse link
G Nebl nebulette involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:17,342,673...17,734,949
Ensembl chr 2:17,343,909...17,731,464
JBrowse link
G Nrap nebulin-related anchoring protein involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr19:56,320,037...56,390,062
Ensembl chr19:56,320,035...56,390,037
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within IMP (MGI:87509|PMID:9114002) MGI PMID:9114002 MGI:87509 NCBI chr 2:114,047,282...114,052,875
Ensembl chr 2:114,047,282...114,053,548
JBrowse link
G Cavin4 caveolae associated 4 acts_upstream_of_or_within ISO (MGI:3794929|PMID:18332105) MGI PMID:18332105 MGI:3794929 NCBI chr 4:48,663,514...48,673,492
Ensembl chr 4:48,663,514...48,673,502
JBrowse link
G Csrp3 cysteine and glycine-rich protein 3 involved_in IMP (MGI:2447926|PMID:12507422) BHF-UCL PMID:12507422 MGI:2447926 NCBI chr 7:48,830,398...48,848,051
Ensembl chr 7:48,830,398...48,848,033
JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5436289|PMID:23213483)
GO_Central
MGI
PMID:21873635 PMID:23213483 MGI:5436289 MGI:6201960 NCBI chr18:24,708,388...25,133,507
Ensembl chr18:24,708,623...25,133,501
JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (MGI:1099556|PMID:9356462) MGI PMID:9356462 MGI:1099556 NCBI chr11:68,691,915...68,816,626
Ensembl chr11:68,691,559...68,816,632
JBrowse link
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow acts_upstream_of_or_within IMP (MGI:1194431|PMID:9422794) MGI PMID:9422794 MGI:1194431 NCBI chr 5:122,092,724...122,113,473
Ensembl chr 5:122,100,951...122,113,472
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr 8:85,324,928...85,386,340
Ensembl chr 8:85,324,303...85,386,345
JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IGI (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 5:75,151,322...75,198,206
Ensembl chr 5:75,152,292...75,198,215
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in IGI (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (MGI:3513738|PMID:15569937) MGI PMID:15569937 MGI:3513738 NCBI chr17:46,546,838...46,558,267
Ensembl chr17:46,548,329...46,556,175
JBrowse link
G Tcap titin-cap involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:98,383,811...98,384,953
Ensembl chr11:98,383,811...98,384,953
JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:3653555|PMID:16702235) MGI PMID:16702235 GO_REF:0000096 MGI:3653555 MGI:4834177 NCBI chr 2:76,703,980...76,982,557
Ensembl chr 2:76,703,980...76,982,547
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IMP (MGI:3689643|PMID:16151019) BHF-UCL PMID:16151019 MGI:3689643 NCBI chr18:73,634,790...73,703,791
Ensembl chr18:73,639,009...73,703,780
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:112,459,505...112,472,872
Ensembl chr 6:112,459,505...112,472,872
JBrowse link
G Mfn2 mitofusin 2 involved_in ISO RGD
MGI
PMID:24777478 GO_REF:0000096 MGI:4417868 RGD:13204833 NCBI chr 4:147,873,586...147,904,909
Ensembl chr 4:147,873,599...147,904,704
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:87,428,994...87,434,512
Ensembl chr 6:87,428,994...87,437,677
JBrowse link
G Edn1 endothelin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:42,301,476...42,307,990
Ensembl chr13:42,301,476...42,307,990
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:12724418 RGD:2312280 NCBI chr15:81,586,209...81,652,077
Ensembl chr15:81,585,351...81,652,077
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:85,324,928...85,386,340
Ensembl chr 8:85,324,303...85,386,345
JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:190,118,035...190,170,827
Ensembl chr 1:190,118,035...190,170,714
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A kinase (PRKA) anchor protein 13 involved_in IMP (MGI:5308772|PMID:20139090) UniProt PMID:20139090 MGI:5308772 NCBI chr 7:75,455,526...75,754,609
Ensembl chr 7:75,455,534...75,754,609
JBrowse link
G Ankrd23 ankyrin repeat domain 23 acts_upstream_of_or_within IGI (MGI:3760007|PMID:17392382) MGI PMID:17392382 MGI:3760007 NCBI chr 1:36,530,193...36,536,556
Ensembl chr 1:36,530,193...36,539,429
Ensembl chr 1:36,530,193...36,539,429
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within IMP (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chr10:36,974,297...37,001,889
Ensembl chr10:36,974,544...37,001,889
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (MGI:3768576|PMID:17875930) MGI PMID:17875930 MGI:3768576 NCBI chr13:83,504,017...83,667,079
Ensembl chr13:83,504,034...83,667,080
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma, cytoplasmic 1 acts_upstream_of_or_within IDA (MGI:3053481|PMID:15194427) MGI PMID:15194427 MGI:3053481 NCBI chr11:120,345,687...120,348,495
Ensembl chr11:120,345,690...120,348,542
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:12,269,426...12,340,732
Ensembl chr13:12,269,426...12,340,760
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:87,428,994...87,434,512
Ensembl chr 6:87,428,994...87,437,677
JBrowse link
G Capn3 calpain 3 acts_upstream_of_or_within IMP (MGI:3046122|PMID:15138196) MGI PMID:15138196 MGI:3046122 NCBI chr 2:120,463,593...120,504,919
Ensembl chr 2:120,463,572...120,504,918
Ensembl chr 2:120,463,572...120,504,918
JBrowse link
G Casq1 calsequestrin 1 involved_in IMP (MGI:5306707|PMID:22049211) UniProt PMID:22049211 MGI:5306707 NCBI chr 1:172,209,894...172,219,895
Ensembl chr 1:172,209,894...172,219,868
JBrowse link
G Casq2 calsequestrin 2 involved_in IMP (MGI:4453101|PMID:19920148) UniProt PMID:19920148 MGI:4453101 NCBI chr 3:102,086,415...102,146,514
Ensembl chr 3:102,086,415...102,146,514
JBrowse link
G Cfl2 cofilin 2, muscle acts_upstream_of_or_within IMP (MGI:5316079|PMID:22343409) MGI PMID:22343409 MGI:5316079 NCBI chr12:54,858,815...54,862,877
Ensembl chr12:54,858,809...54,862,877
JBrowse link
G Csrp1 cysteine and glycine-rich protein 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:135,720,063...135,752,229
Ensembl chr 1:135,720,061...135,752,232
JBrowse link
G Csrp2 cysteine and glycine-rich protein 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:110,920,176...110,939,514
Ensembl chr10:110,919,789...110,939,622
JBrowse link
G Csrp3 cysteine and glycine-rich protein 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:48,830,398...48,848,051
Ensembl chr 7:48,830,398...48,848,033
JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within
IBA
IGI
ISO
(MGI:6201960|PMID:21873635)
(MGI:4422153|PMID:19706596)
GO_Central
MGI
PMID:19706596 PMID:21873635 GO_REF:0000008 MGI:2154458 MGI:4422153 MGI:6201960 NCBI chr18:24,708,388...25,133,507
Ensembl chr18:24,708,623...25,133,501
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within IGI (MGI:4829405|PMID:20713518) MGI PMID:20713518 MGI:4829405 NCBI chr 6:98,925,342...99,522,746
Ensembl chr 6:98,925,338...99,522,721
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) acts_upstream_of_or_within IMP (MGI:84974|PMID:9004034) MGI PMID:9004034 MGI:84974 NCBI chr 8:128,685,654...128,733,579
Ensembl chr 8:128,685,654...128,733,200
JBrowse link
G Klhl41 kelch-like 41 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:69,670,120...69,684,239
Ensembl chr 2:69,670,120...69,684,230
JBrowse link
G Krt19 keratin 19 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:100,140,810...100,145,926
Ensembl chr11:100,140,810...100,148,665
JBrowse link
G Krt8 keratin 8 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:101,996,711...102,004,342
Ensembl chr15:101,996,698...102,004,482
JBrowse link
G Ldb3 LIM domain binding 3 acts_upstream_of_or_within IMP (MGI:2153618|PMID:11696561) MGI PMID:11696561 MGI:2153618 NCBI chr14:34,526,699...34,590,314
Ensembl chr14:34,526,603...34,588,682
JBrowse link
G Lmod2 leiomodin 2 (cardiac) involved_in ISO
IMP
(MGI:5787841|PMID:27274810) MGI
UniProt
PMID:27274810 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:5787841 NCBI chr 6:24,597,771...24,605,414
Ensembl chr 6:24,597,762...24,605,414
JBrowse link
G Mybpc3 myosin binding protein C, cardiac acts_upstream_of_or_within IMP (MGI:3616388|PMID:16380103)
(MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063)
MGI PMID:16224063 PMID:16380103 PMID:17075052 MGI:3616388 MGI:3695637 MGI:3696622 NCBI chr 2:91,118,114...91,136,516
Ensembl chr 2:91,118,144...91,136,516
JBrowse link
G Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha acts_upstream_of_or_within IMP (MGI:83539|PMID:8878443) MGI PMID:8878443 MGI:83539 NCBI chr14:54,941,921...54,968,017
Ensembl chr14:54,941,921...54,966,927
JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IDA
ISO
IBA
(MGI:3841874|PMID:18202317)
(MGI:6201960|PMID:21873635)
BHF-UCL
MGI
GO_Central
PMID:18202317 PMID:21873635 GO_REF:0000096 MGI:3841874 MGI:4417868 MGI:6201960 NCBI chr 8:85,324,928...85,386,340
Ensembl chr 8:85,324,303...85,386,345
JBrowse link
G Myom2 myomesin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:15,057,653...15,133,420
Ensembl chr 8:15,057,653...15,133,541
JBrowse link
G Myoz1 myozenin 1 involved_in IMP (MGI:3831256|PMID:18846255) BHF-UCL PMID:18846255 MGI:3831256 NCBI chr14:20,649,102...20,656,540
Ensembl chr14:20,649,107...20,656,540
JBrowse link
G Myoz2 myozenin 2 involved_in IDA (MGI:3513659|PMID:15543153) BHF-UCL PMID:15543153 MGI:3513659 NCBI chr 3:123,006,206...123,035,003
Ensembl chr 3:123,006,206...123,035,015
JBrowse link
G Mypn myopalladin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,115,795...63,203,952
Ensembl chr10:63,115,795...63,203,952
JBrowse link
G Neb nebulin acts_upstream_of_or_within TAS (MGI:80083|PMID:8618961) MGI PMID:8618961 MGI:80083 NCBI chr 2:52,136,640...52,338,798
Ensembl chr 2:52,136,647...52,378,474
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within IMP (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr 2:164,830,730...164,833,596
Ensembl chr 2:164,830,732...164,833,456
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IGI (MGI:4829405|PMID:20713518) MGI PMID:20713518 MGI:4829405 NCBI chr17:26,838,664...26,844,988
Ensembl chr17:26,838,664...26,845,009
JBrowse link
G Plec plectin involved_in IMP (MGI:5567855|PMID:24487589) MGI PMID:24487589 MGI:5567855 NCBI chr15:76,170,974...76,231,378
Ensembl chr15:76,170,974...76,232,574
JBrowse link
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha acts_upstream_of_or_within IMP (MGI:3821563|PMID:18316483) MGI PMID:18316483 MGI:3821563 NCBI chr11:109,649,023...109,669,663
Ensembl chr11:109,649,405...109,669,656
JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (MGI:5298278|PMID:21884692) UniProt PMID:21884692 MGI:5298278 NCBI chr12:73,099,609...73,114,031
Ensembl chr12:73,099,609...73,113,456
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (MGI:3513738|PMID:15569937) MGI PMID:15569937 MGI:3513738 NCBI chr17:46,546,838...46,558,267
Ensembl chr17:46,548,329...46,556,175
JBrowse link
G Synpo2l synaptopodin 2-like involved_in IMP (MGI:6102963|PMID:29206857) BHF-UCL PMID:29206857 MGI:6102963 NCBI chr14:20,658,945...20,668,354
Ensembl chr14:20,658,946...20,668,354
JBrowse link
G Tcap titin-cap involved_in
acts_upstream_of_or_within
ISO (MGI:1314551|PMID:9817758) MGI PMID:9817758 GO_REF:0000096 MGI:1314551 MGI:4834177 NCBI chr11:98,383,811...98,384,953
Ensembl chr11:98,383,811...98,384,953
JBrowse link
G Tnnt1 troponin T1, skeletal, slow involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:4,504,569...4,515,975
Ensembl chr 7:4,504,570...4,516,382
JBrowse link
G Tnnt2 troponin T2, cardiac acts_upstream_of_or_within
involved_in
IMP
IBA
(MGI:1342889|PMID:10449439)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:10449439 PMID:21873635 MGI:1342889 MGI:6201960 NCBI chr 1:135,836,315...135,852,268
Ensembl chr 1:135,836,354...135,852,260
JBrowse link
G Tnnt3 troponin T3, skeletal, fast involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:142,498,771...142,516,213
Ensembl chr 7:142,498,836...142,516,009
JBrowse link
G Tpm1 tropomyosin 1, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:67,022,590...67,049,672
Ensembl chr 9:67,022,590...67,049,406
JBrowse link
G Ttn titin acts_upstream_of_or_within
involved_in
IMP
ISO
TAS
(MGI:3653555|PMID:16702235)
(MGI:78310|PMID:2129545)
(MGI:3760201|PMID:17360664)
MGI
RGD
PMID:2129545 PMID:11034912 PMID:16702235 PMID:17360664 GO_REF:0000096 MGI:3653555 MGI:3760201 MGI:4834177 MGI:78310 RGD:634444 NCBI chr 2:76,703,980...76,982,557
Ensembl chr 2:76,703,980...76,982,547
JBrowse link
G Wdr1 WD repeat domain 1 involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5574550|PMID:24840128)
GO_Central
MGI
PMID:21873635 PMID:24840128 MGI:5574550 MGI:6201960 NCBI chr 5:38,526,806...38,562,922
Ensembl chr 5:38,526,813...38,563,221
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 acts_upstream_of_or_within IMP (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chr 9:120,013,755...120,023,598
Ensembl chr 9:120,013,755...120,023,598
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk3 myosin light chain kinase 3 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:85,324,928...85,386,340
Ensembl chr 8:85,324,303...85,386,345
JBrowse link
G Tcap titin-cap involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:98,383,811...98,384,953
Ensembl chr11:98,383,811...98,384,953
JBrowse link
G Ttn titin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:76,703,980...76,982,557
Ensembl chr 2:76,703,980...76,982,547
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcap titin-cap involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:98,383,811...98,384,953
Ensembl chr11:98,383,811...98,384,953
JBrowse link
G Tmod1 tropomodulin 1 NOT|acts_upstream_of_or_within IMP (MGI:2683807|PMID:14657235) MGI PMID:14657235 MGI:2683807 NCBI chr 4:46,038,940...46,116,032
Ensembl chr 4:46,038,935...46,116,032
JBrowse link
G Ttn titin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:76,703,980...76,982,557
Ensembl chr 2:76,703,980...76,982,547
JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:123,891,758...123,894,775
Ensembl chr 8:123,891,769...123,894,751
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within IMP (MGI:87509|PMID:9114002) MGI PMID:9114002 MGI:87509 NCBI chr 2:114,047,282...114,052,875
Ensembl chr 2:114,047,282...114,053,548
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:97,238,530...97,253,217
Ensembl chr 6:97,238,534...97,252,759
JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:190,118,035...190,170,827
Ensembl chr 1:190,118,035...190,170,714
JBrowse link
G Tcap titin-cap involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:98,383,811...98,384,953
Ensembl chr11:98,383,811...98,384,953
JBrowse link
G Ttn titin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:76,703,980...76,982,557
Ensembl chr 2:76,703,980...76,982,547
JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator involved_in IMP (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chr 1:58,711,311...58,758,884
Ensembl chr 1:58,711,508...58,758,884
JBrowse link
G Plec plectin involved_in IMP (MGI:5567855|PMID:24487589) MGI PMID:24487589 MGI:5567855 NCBI chr15:76,170,974...76,231,378
Ensembl chr15:76,170,974...76,232,574
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2A involved_in IMP (MGI:2429350|PMID:12379849) UniProt PMID:12379849 MGI:2429350 NCBI chr 7:67,231,163...67,376,456
Ensembl chr 7:67,231,163...67,372,858
JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (MGI:4355491|PMID:19546853) MGI PMID:19546853 MGI:4355491 NCBI chr17:26,838,664...26,844,988
Ensembl chr17:26,838,664...26,845,009
JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:190,118,035...190,170,827
Ensembl chr 1:190,118,035...190,170,714
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28599
    developmental process 7034
      anatomical structure formation involved in morphogenesis 1263
        cellular component assembly involved in morphogenesis 123
          myofibril assembly 70
            cardiac myofibril assembly + 19
            muscle thin filament assembly 0
            sarcomere organization + 50
            sarcomerogenesis 3
            skeletal myofibril assembly + 9
            striated muscle myosin thick filament assembly + 3
            striated muscle paramyosin thick filament assembly 0
Path 2
Term Annotations click to browse term
  biological_process 28599
    cellular process 17562
      cellular component organization or biogenesis 6545
        cellular component organization 6356
          organelle organization 3942
            cytoskeleton organization 1430
              actin cytoskeleton organization 733
                actomyosin structure organization 213
                  myofibril assembly 70
                    cardiac myofibril assembly + 19
                    muscle thin filament assembly 0
                    sarcomere organization + 50
                    sarcomerogenesis 3
                    skeletal myofibril assembly + 9
                    striated muscle myosin thick filament assembly + 3
                    striated muscle paramyosin thick filament assembly 0
paths to the root